Laccaria bicolor: LACBIDRAFT_250191
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Entry
LACBIDRAFT_250191 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
lbc
Laccaria bicolor
Pathway
lbc04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
LACBIDRAFT_250191
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lbc04131
]
LACBIDRAFT_250191
Membrane trafficking [BR:
lbc04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
LACBIDRAFT_250191
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
6076721
NCBI-ProteinID:
XP_001881387
JGI:
250191
UniProt:
B0DB35
LinkDB
All DBs
AA seq
924 aa
AA seq
DB search
MAAHPVVEEGKLLSEALNTVKIQVQQMKRHLELDQLMDALKSASTMLAELRTSSLSPKQY
YELYMAVFDALRHLSNYLYEAHTQSRHHLADLYELVQYAGNIIPRLYLMITVGSVYMSIP
EAPVKEIMKDMMEMSRGVLHPIRGLFLRHYLSGQTRDHLPVGLDSGPSGNLQDSISFVLT
NFIEMNKLWVRLQHQGHSRDREKREMERRELRILVGTNLVRLSQLDGVDLDMYQKTILPS
ILEQVVNCKDVIAQEYLMEVVIQVFTDEFHLHTLGPFLSATAQLHPKVNIKQIVIALIDR
LASYAAREAESEDPEETKRQEEAAARRLAEKVKLQKERARENAYRAASPTSAGPDANAWG
VPTSPTTTTTFSESEKSPVLPTSPSSTIDEKLGKGKDKEGSPVRKFRGVPEDVQLFEVFW
KQVVELIKARPDLSIQDITALLVSLTNLSLSCYPDRLEYVDQVLGFAADKIKEFSESPDL
HAQQTTTNLSALLVAPINSYQSVLTLLAIPNYGPLLTKQLFLTRRSIAHSVVSSVLKNET
IVESPEDVDGVLELCHVLIKDQSDSGAALAPNGSQTNREEMAEEQGWVARMVHLFRAESL
DVQFELLQVARRHFDMGGERMRFTFPALITSSIKLCRRYKNRQHVEDEWETKVAAILKFV
RQVTAILATQVEAPTIALRLFLLSAQIADECGFEDLSYDFYVQAFSVYEESISESRAQLQ
AITLIIGTLSGAKVFGMDNYDTLITKAALHGARLLKKSHQATAVGLASHLWWQEAPPPAE
GEVEYPHQDSKRVLECLQKSLRIANSAIEEIVTVQLYCDALDHYLYYLDRGAPDLAPKYV
NSLVELITSSIDNISSPDVHPTQRAPPGLIEGVQTPEMITRHFRNTLGYINRRKNAAADG
TGAVDSRWDDVDVVGALLKMGIGR
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcacccagttgtggaggaggggaagctgcttagtgaggccctgaataccgtc
aaaattcaggttcagcagatgaagcggcatttggaactagaccaactcatggatgctttg
aagagcgcaagtacgatgctcgcggaactgcggacatcgtcgctgtcaccaaagcaatac
tatgagctatatatggcggtatttgacgcactccgacacctctccaactacttgtacgaa
gcccacacgcagtccagacaccatttagccgacctttatgaattggttcaatacgctggc
aacatcatcccaaggctatatctcatgatcaccgttggctccgtgtacatgtctattccg
gaggcacctgtcaaagagataatgaaggatatgatggaaatgtcaagaggggttctgcat
ccgatacgcgggctcttccttcgacactatctcagtgggcaaacgagagaccatttacct
gttggacttgactctgggccctctggcaacctccaagattcgataagcttcgttctcacc
aatttcattgagatgaacaagctctgggtgcggctgcaacatcaaggtcactcacgcgac
cgcgagaagcgtgagatggagcgacgcgaactacgaatcctcgttggcaccaacctcgtc
cgacttagtcaacttgacggtgtcgacctggacatgtaccagaagacgatattgcccagc
attctcgagcaggttgtcaattgcaaagatgtgatagctcaagagtacttgatggaggtc
gtcattcaggtctttacagacgagttccatttgcatacccttggccccttcctatcagcg
accgcccagcttcatccaaaggttaacattaagcagatcgtcatcgcccttattgatcga
cttgcctcgtatgcggcacgcgaggctgagagtgaggaccccgaggagacaaaacgtcaa
gaagaagctgctgctcgacgccttgcagaaaaggtgaagctgcagaaggagagggcccga
gaaaatgcgtatcgagccgcctcacccacttcggctgggccagacgcgaacgcctggggc
gtaccaacatctcccacaacaacaactaccttttcagagtccgagaagtcacctgtcttg
ccgacctctcctagctcaaccattgatgagaaattggggaaaggaaaggataaggagggc
tcacctgtgcgcaagttccgaggtgtacctgaggacgtgcaactgtttgaggtcttctgg
aagcaagttgttgagctcatcaaggctcgacccgacctttcaatacaagatatcactgct
ttgcttgtctctctgacaaacctttccctgagctgttatcctgacagacttgaatatgta
gatcaagtccttggatttgctgccgacaaaataaaggagtttagtgaaagccctgatttg
cacgcgcaacaaacgaccaccaacctttccgcccttctggttgccccaatcaactcttat
caatcagtgctcacattacttgccattcccaattacggccccctactgacgaaacaactc
ttcttgacgcgtcgctctatcgctcattccgttgtctcctctgtgctcaagaacgagaca
attgtagagtcaccagaggacgttgatggggttcttgaactgtgtcatgtccttatcaag
gatcagtcggattcaggtgctgcattagcaccgaacggttcacaaacgaacagggaggag
atggcggaagagcaagggtgggtggcgagaatggtgcatttgttccgtgctgagtcactg
gatgtacaattcgagctcttacaagttgcgcgtcgacactttgacatgggaggagaaagg
atgcgctttacgttccctgctctcattacatcctctatcaaactatgtcgccggtacaaa
aaccggcaacatgtggaggacgaatgggagacgaaagtagccgcgatcctcaaattcgta
cggcaggttaccgccatcctcgcaacacaggtcgaggcgccaacgattgcactgcgattg
ttcctcctctctgcgcagatcgctgacgagtgtgggttcgaggacctatcatacgatttc
tatgtgcaggctttcagtgtgtacgaggagagcatatcagaatcgcgcgctcaattacaa
gcgattacacttatcattggcacactctctggcgccaaggtctttggtatggacaattat
gataccctgatcaccaaggctgcgctgcatggggcaaggttgctgaagaagagccatcaa
gctacggcggtgggcttggcgagtcatctttggtggcaagaggcgcctccacctgctgag
ggcgaggttgagtaccctcatcaagacagcaagcgcgttctcgagtgccttcagaagtcc
ttgcgcatcgccaactcggcgattgaggaaatcgtcactgtacagctctattgtgatgct
ctcgatcactatctgtattaccttgaccggggagccccagatcttgctcccaagtatgtg
aatagcttggttgagctaatcacatcgagtatagacaacatctcatcgccagacgtccac
cctacccaacgagcacctccaggtctcattgaaggtgtccagacacctgaaatgatcacg
agacattttaggaatacgcttgggtacatcaacaggaggaaaaatgctgcggctgatggc
actggtgctgtggactcgaggtgggacgatgtggatgttgttggcgcccttttgaagatg
ggcattggacgatga
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