Laccaria bicolor: LACBIDRAFT_251110
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Entry
LACBIDRAFT_251110 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
lbc
Laccaria bicolor
Pathway
lbc04138
Autophagy - yeast
lbc04142
Lysosome biogenesis
lbc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
LACBIDRAFT_251110
04138 Autophagy - yeast
LACBIDRAFT_251110
04148 Efferocytosis
LACBIDRAFT_251110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lbc04131
]
LACBIDRAFT_251110
Membrane trafficking [BR:
lbc04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
LACBIDRAFT_251110
Hops complex
LACBIDRAFT_251110
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
VPS18_solenoid_2nd
Clathrin
zf-C3H2C3
TPR_Vps41
zf-C3HC4_2
zf_RING_Vps8_fungal
FapA_amyloid
Beta-prop_WDR3_1st
Beta-prop_NOL10_N
zf-RING_2
DUF5847
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
6078472
NCBI-ProteinID:
XP_001882977
JGI:
251110
UniProt:
B0DGA3
LinkDB
All DBs
AA seq
1039 aa
AA seq
DB search
WRQFSFFDVVPVKDVHDLDSPPYIFKVRASSSLRITTLNNSHHRQPQKYPQSLRQDIHGS
IHLLNRDFESTNSWVAHVSGRVTHMVERQGVLVTLGEEDNVKSPLLKIWDMQNTDKKTGS
PHLLRSTKVQLSNRPHPVTTIALSASLSHLAIGLGDGTVLLYRHLDQSLASSTSLTSLPK
PRTVHESPTEPITGLGFREPTEDIVNAYLFVVTTNRVLSYQASGRGSGGSATVVDEVGSG
LGCATMDWRKRDIVVARDEAIYICGIDGRGACYAYEGHKSSVHTHQNYLVIVSPPFFPTA
TAASATVRNFVARSANPGETDITKVNVFDLENKLVAYSGTFKQGVKEVISQWGEIYVLAT
DGTLTCLEEKSTADKLDMLYRKSLYLLALNMAKTQNLDVASVSDIHKQYGDHLYGKGDYD
GAMQQFVQTIGHLQPSYVIRKFLDAQRIHNLVTYLQELHSLGLANSDHTTLLLNTYTKLK
DVSRLDTFIKTESRRGDDSDELPFDLETAIRVCRQAGYFEHAGYLAKKYQRHEDYLRIQI
EDAGNYKDALVYLRKLGSEAAESNLARYGRAMLNSLPEETTQLLIDLCTSTGPLISEPEE
ITPKSPAAAAAPSGPSYLSYLALNRNSPLGSVLGGVSISGTITPPPTTTDNIPPSKSNTP
FAPPPKSPSPTPHHRLSPKLYFPHFVDNVDQFLVFLETVAVRRWNQSVDPTPPTPGMVGV
LGGVEPPDASDEVGVEMDRRDQVAVWNTLLELYLTLPLPGGARKEAMRVLRSGKIPYEPM
HALILCSTHSFTDGLVLLYEKMGMYEDVLRFWMDKHNQASSPGASAKVVEHLMHYGNQHP
HLYPLVLRFLTSTPELLREHQEDVRGILEYIDQEEMMSPLSVVQVLSRNGVASVGLVKEW
LVGRIKEARGIIQSDQELITSYRTETTTKLKQVEALSDPDNAHVFHVTRCSACHAQLDLP
SVHFMCDHSYHQRCIAEHETECPNCAQEHGVIREIRRNNERLADQHDVFLSEVKEGGFEA
VAGAFGRGLMNMGRVEEVV
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
tggcgccaattctccttcttcgatgtcgttcccgtgaaggacgtacacgatctcgacagc
cctccctacatcttcaaagtacgtgcttcctcgagcctccggataacaacgctcaacaat
tcacatcacaggcagccacagaaatatccacagtcgcttcgtcaggacattcacgggagc
atacacctcctcaacagggactttgaatcgacaaatagctgggtagctcatgtcagtgga
agagtaacacatatggtggaacgacaaggcgttctagtgactcttggtgaagaagataac
gtcaaatcaccactcctcaagatctgggatatgcagaacacagacaagaaaacgggttct
ccccacctcctccgctcaacaaaagttcagctgagcaatcgtcctcaccccgtaacaacc
atagccctctccgcctccctctcccacctcgccatcggcctcggagacggcaccgtcctc
ctctaccgccacctcgaccaatccctcgcatcatccacatccctcacctccctccccaaa
ccacgcacagtgcacgaatcgcccacagaacctataacagggcttgggttcagagaaccc
acggaagatatcgtaaacgcgtatttgttcgtggttaccacgaatagggtgttatcgtac
caggcttcggggagggggagcggggggagcgcgacggttgtggatgaagttgggtctggg
cttggatgtgcgactatggattggaggaagagggatattgtggttgcgagggatgaggcg
atttatatttgtgggattgatgggaggggggcttgttatgcttatgaaggccacaaatca
tccgtgcacacgcaccagaactacctcgtcatcgtatcgccgcctttcttccccactgct
acggcggcctctgcgacggtaaggaactttgttgcaagatctgcaaacccaggcgagacg
gacattacgaaagtcaatgtattcgatctggagaacaagcttgtggcgtacagtggtacg
ttcaagcagggtgtgaaggaggttatatcgcagtggggcgagatatatgtgttggctact
gatggcactttgacgtgtctggaagaaaaatcaacagcggataaactcgacatgctttac
cgaaagtctctatacctcctagcactaaacatggccaagacgcagaatttggacgtggcg
agtgtttctgatatacacaaacagtatggggatcatctgtatgggaagggagactatgac
ggggcaatgcagcagttcgttcagacgattgggcacttacagcccagttacgttattcgc
aagttcctcgacgcacaaaggattcacaacctcgtaacctatctgcaagaactccactcc
ctaggcctcgcaaactcagaccacaccaccctcctcctaaacacatacaccaaactcaag
gacgtatctcgactagacacgtttatcaagactgagtctaggcggggagacgactcggat
gagctcccgtttgatttggagacggctattagggtgtgtaggcaggcagggtactttgag
cacgctgggtaccttgcgaagaagtatcagaggcatgaggattacttgaggatacagatt
gaggatgcggggaattataaggatgctttggtttatttgaggaagttgggatctgaggcg
gcggaaagtaatctggcacgatatggacgcgcgatgcttaatagtcttccggaggaaacg
actcagctgcttattgacctgtgcacgagtacaggtccactcatctccgaaccagaggag
atcacgccaaagtcccctgcggcagcagctgcaccctccggtccatcctacctctcctac
ctcgccttgaaccggaattcaccactagggtcagtacttggaggcgtctccatctcagga
accataacccctcctccaaccacaaccgacaacatccccccctcaaaatccaacaccccc
tttgctccaccacccaaatctccctctcccacaccgcaccaccgcctctcacccaaactc
tactttccacactttgtagacaacgtcgaccaatttcttgtcttcctcgaaacggtggct
gttagacgatggaaccaatctgtggatcctacgccgcctactcctgggatggtgggtgtg
ttggggggtgttgagccgcctgatgcgagtgatgaggtgggtgttgagatggatagaagg
gatcaggttgctgtttggaatacgcttttggagctgtatttgacgttgcctttgccagga
ggtgcgaggaaggaggcgatgcgtgtgctgaggagtgggaagatcccttatgagccgatg
cacgctcttatcctgtgttccacgcattcgttcacggatgggcttgtgctgttgtatgag
aagatggggatgtatgaggatgtgttgaggttttggatggacaagcataatcaagcgtca
tcccctggagcttctgcgaaagtggtggaacatctcatgcattatgggaaccagcatccg
catttgtatccgttggtattgaggttcttgacgtctacaccggagttgttgagggagcat
caggaggatgtgagggggatattggagtatattgatcaggaggagatgatgtcgccgttg
agtgtcgtgcaggttctcagtaggaatggggtggcgagtgtgggtcttgtgaaggagtgg
ttggttgggaggattaaggaggctagagggattattcagagtgatcaagaactgataact
tcgtatcggacggagacgacgacgaagttgaagcaggtcgaggcgctctctgatcctgac
aacgcgcacgttttccacgttacgcggtgttcggcgtgtcatgcccaacttgacctgcct
agtgtgcatttcatgtgtgatcacagctatcaccagcgatgcatagcggaacatgaaacg
gagtgcccgaactgtgcgcaggaacatggggttattcgggagataaggaggaacaatgag
aggcttgcggaccagcatgatgtgtttttgtcggaggttaaggagggtgggttcgaggct
gttgcgggggcttttgggaggggattgatgaatatggggagggtggaggaggttgtgtag
DBGET
integrated database retrieval system
