Laccaria bicolor: LACBIDRAFT_252536
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Entry
LACBIDRAFT_252536 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
lbc
Laccaria bicolor
Pathway
lbc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LACBIDRAFT_252536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbc03400
]
LACBIDRAFT_252536
DNA repair and recombination proteins [BR:
lbc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
LACBIDRAFT_252536
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
Spectrin_Anc-1_2
DUF7659
DUF7532
AAA_27
Motif
Other DBs
NCBI-GeneID:
6080477
NCBI-ProteinID:
XP_001884765
JGI:
252536
UniProt:
B0DLM3
LinkDB
All DBs
AA seq
965 aa
AA seq
DB search
FIPFFNKLPKKSPETGTLRLFHRTGSDEFYSAYGPDATFVAQHVFHTNSVIKYLGSGGKL
PSVALKVSVAQTLLREALTTKQLRVEIWVPEPGQGKKQTKFRLDKEASPGNLQAVEDLLF
VNSDLLSSPIVMAVKLASAPAGASGAKGKLKSIGIAFADTSIRQLGVADFVDNDLFSNLE
SLVIQLSVKEAVIPTGTASGTTDRDVDLNKLKSVLDRCGVVITERKPSEFTAKNIADDLP
RLLKNSLASSSADVSMTIPQLLLPFAPSALSALVTYLSLLSDPSNHDAYKIFTHDLSQYM
KLDASATRALSLTEAPGNVGTTTRNTTLFGLLNKCKTAQGARLLGVWLKQPLVNLHEIHK
RQNLVETFVEDTNSRRTLQDDYLKMMPDIQRLSKRFQRSAASLEDVVRVYQMVLKLPGMI
ETLGGIQSENDEYSVLVDETFLKPLKECEANLSKYAEMVEQTLDLDELDNHNYVIKSDFH
PTLQELAEKLKDVNNEHRKAGKDLGLDLDKKLQLQNHPVNGYCLRVTKADAKNLTDKYTE
LNTNKGGVFFRTKALKQLAEDFAELSQTYSRTQSGLVKEVINIAATYTPVLETVDVIIAN
LDVIIRQNKPLETTALFTDDYCYSLAHVSVNAPTPYVKPRVSNYSQGSGNLILKQARHPC
LEVQDEVDFIANDVEMIKDSSEFQIITGPNMGGKSTYIRQVGVVSLMAQVGCFVPCEEAE
VPIFDSILCRVGAGDSQLKGVSTFMAEMLETATILQASILYSLIIIDELGRGTSTYDGFG
LAWAISEHIASQIHAFCLFATHFHELTALDQQIPHVKNLHVVAHIEASMSGKSYRDRAIT
LLYKVEPGISDQSFGIHVAELANFPESVVKLAKRKADELEDFSGENKEMASDISQKVTEE
GVQIMEDLLAAWSSSTRTLDQDGDDTVMADDLSPEAQLEELKKYVAEFQPRIQSNEWLRS
VITAL
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
tttatccccttcttcaacaagctaccgaagaaatcaccagaaacaggaactcttcgactt
ttccaccgaacaggaagcgatgaattctactcagcctatgggcctgatgccacttttgtc
gcgcaacatgtatttcacacaaattcagtcattaaatatctcggtagcggcggaaaattg
cctagtgtcgccctcaaggtttccgtagcgcagactttgctcagggaagcactgacaaca
aagcaacttcgagtcgagatatgggtaccagaaccaggccaaggcaaaaagcaaaccaaa
ttccgtctagataaggaggcttctcctggaaatttgcaagctgtggaggatcttctcttc
gtcaattcggacctactgtcgtccccgatagttatggcagtcaagcttgccagtgctcca
gcaggcgcgtccggtgcgaaagggaagctgaagtcaatcggcatcgcttttgcagacaca
agcatccgacagttaggtgttgcggatttcgtggataatgatctcttttccaacttggaa
tccctcgtcatccaactctcagtcaaggaagctgtcattccaacagggactgcctcggga
actacggaccgcgacgtagatttgaataaattgaaatcggtattagatcggtgtggggtg
gtcatcacagagcgcaaaccgagcgagtttactgccaaaaatattgcagatgatctgcca
cgtcttttgaaaaattcgttagcctcatcctctgcggatgtttccatgactatccctcaa
ttgttgctgccctttgcgccgtctgcgctctcggctctggtcacctatttgtctcttctt
tctgatccctcaaatcatgatgcctacaagattttcactcacgatctgtctcaatacatg
aagcttgatgcaagtgcaaccagagctttgagcttgaccgaggcgccagggaatgttgga
accacgactcgaaacactaccctctttggtcttttgaacaagtgcaaaacggcgcaggga
gcgagattacttggcgtttggttaaagcagccattagtgaacttgcatgagatccataaa
cgtcaaaatctcgtcgagacgtttgtagaggatactaacagccgtaggacgttgcaggat
gattatttgaaaatgatgcccgacattcaacgccttagcaaacgttttcaaaggtccgcc
gcttcccttgaggacgtagtcagagtttaccaaatggttctgaagttgcctggtatgatt
gaaacactcgggggcattcaatccgaaaacgacgaatactcagttttggtcgacgaaacc
tttttgaaacctctgaaggagtgcgaagcaaatctgtccaagtatgcggaaatggtggaa
caaacccttgatttggacgagcttgacaatcacaactacgtgataaaatcagatttccat
ccaacgcttcaggaacttgcggagaagttgaaagatgtaaataacgagcatcgcaaagct
ggcaaagatctaggcttggaccttgacaaaaaacttcaactccaaaaccacccggtcaat
ggctattgtctccgtgttacaaaagctgatgcgaaaaacctcacagataaatatacggaa
ctcaacacgaacaaaggtggcgtttttttcaggaccaaagccctcaaacaacttgcggag
gacttcgcggagttatcgcaaacgtacagtcgcacccagagtggtctcgtcaaagaggtt
ataaacattgctgcaacttacactcctgttcttgaaactgtcgatgtgatcattgccaac
ctggatgtcatcatcaggcaaaataaaccattagagacgaccgccttgttcactgatgat
tattgttatagcctcgctcacgtctcagtgaatgccccaacgccctacgtcaaacccaga
gtgtctaattactctcaaggctctggcaatctcattctgaagcaagcaaggcatccttgt
ttagaagttcaagacgaggttgatttcattgccaacgacgtcgagatgataaaggattct
agcgagttccaaattataacgggaccgaacatggggggaaagtcgacgtatattcgccag
gtcggcgtggtttccctgatggcgcaagtgggatgtttcgttccctgcgaagaagcagaa
gtacccatcttcgactctattctttgcagggttggtgctggtgacagtcagctcaagggt
gtttcaactttcatggcggaaatgctggagaccgctacgattcttcaagcgagtattttg
tactctctcatcatcattgatgagcttgggcgaggaacgtcaacatatgatggtttcgga
ctcgcatgggcaatttcagaacatatcgcatcacaaatacacgccttctgtctcttcgca
actcactttcatgagctgactgcgttagatcaacaaattccacatgtcaagaacttgcac
gtcgttgcgcatatcgaagcctctatgtctggaaagagttatcgggaccgagccattaca
ctgctgtacaaggtcgaacctggcatttctgatcagagttttggtatccacgttgcggaa
ttggctaatttcccagaaagcgttgtcaagctggcaaaaaggaaagccgacgagctggaa
gatttcagcggtgaaaacaaggagatggccagtgatatctcacagaaggtcacggaagag
ggagtccaaatcatggaagaccttttggcagcgtggtcctcatcgacacgaacattggac
caggatggagacgatactgttatggcggatgacctatcgccagaagctcagttggaggag
ctcaagaaatatgttgcagaatttcagccacgcatccagagtaatgagtggttgcgctcg
gtaatcactgcattatga
DBGET
integrated database retrieval system
