Laccaria bicolor: LACBIDRAFT_291759
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Entry
LACBIDRAFT_291759 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K12878
THO complex subunit 1
Organism
lbc
Laccaria bicolor
Pathway
lbc03013
Nucleocytoplasmic transport
lbc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LACBIDRAFT_291759
09122 Translation
03013 Nucleocytoplasmic transport
LACBIDRAFT_291759
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbc03019
]
LACBIDRAFT_291759
03041 Spliceosome [BR:
lbc03041
]
LACBIDRAFT_291759
Messenger RNA biogenesis [BR:
lbc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
LACBIDRAFT_291759
Spliceosome [BR:
lbc03041
]
Complex C
Other components
EJC/TREX
LACBIDRAFT_291759
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
LACBIDRAFT_291759
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
HTH_Cmi2_C
Motif
Other DBs
NCBI-GeneID:
6068945
NCBI-ProteinID:
XP_001873478
JGI:
291759
UniProt:
B0CNA6
LinkDB
All DBs
AA seq
732 aa
AA seq
DB search
MTSLQPFLTSLLKSLPPPPAAQDVLNELIKKTLQDAKDKASPENRKSQWEYLLKNEIFIL
ASKEGQALKDPNTKYYDELRDKLDVVLTFTEHDACEQTFPFIVLQDLLETQTIASCSHIF
SWIEARAERLTEGMVPQKGKALILLRTLNDLLRRLSKMGTTTIFCGRILTFLSGVFPLGE
RSGVNLRGEYGPTWEGVSLGEKTKADDKHVEMEVAKSLEEPESKEGEAQGDKMQVDSKEV
KKPVPTEGLAEKKDAFYNTFWALQLPFSKPPLFAADGTFEDFKERVNKVMPVIKEATAKE
RAMMGSRGVAGTGASLKRKRDLDSEESNSNEYFFAKFLTSPDLLDLEIADTHFRRQFLFQ
LLILLNHLLTFTKTAKAAWTSTRNRSLQMDFTLEDNEAQWVQESITKVTEELRQTTPNGR
IFAETISAILDREKNWVRWKNELCAPFDKEPWFVEQEGKFLDLFDATAPIRAKMREPPED
WKWQLGTEPLTEIWDMGYRDLTDLQNPFQPGDVKDFVKKIKQEDARIELRKRNLTKTAER
LALAQARAAAAKAAVTTETKETVPSASTSAETLSAPRPLVGSNQTSSSLHPSLPPKPGSP
VKPSLSQDTVRNATPAPAVPVIAIAAPVPAPSPAPTPAPTAALPDEQISKFEENKQRWSW
LALRTARDQYLQHFGKIGTGDIELLAQEIEKEKEKPQKGEECSGFNSFRSPTLPTVPRPR
QPPMATHTSPLK
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgacctccctccaacctttcctcacgtctctactcaaatccttgccccctccccctgct
gcacaagatgtccttaatgaactcataaagaagactctacaggacgcgaaagacaaagcg
tctccagaaaatcgaaagagtcaatgggaatacttgctcaagaatgaaatatttattctt
gcctcgaaggaaggccaggctctcaaagacccaaacacgaaatattacgacgagttacgc
gacaagcttgacgtggttctcacattcacggagcacgatgcctgcgagcaaaccttcccc
ttcatagtcctccaagacctccttgagacccagacgatcgcctcttgttctcacatcttc
tcatggatcgaggctcgggctgagagactaactgagggaatggttccgcagaagggcaaa
gcacttatcctcttacgtacgctgaacgacctgctacgccgtctttctaagatggggacc
acgacaatcttctgtggtcgaatcttgacctttttgagtggcgttttccctcttggtgag
agaagtggtgtaaatctccggggcgagtatggacccacatgggagggcgttagtctgggg
gagaaaaccaaggcggatgataaacatgtggagatggaagttgcgaaaagcctggaggag
cccgaatcgaaggaaggtgaggcgcagggtgataagatgcaggttgactccaaagaggtg
aaaaagccggtgccaacggaaggtcttgccgagaaaaaggatgcattttacaacacattc
tgggcccttcagctgcccttttccaagcctccccttttcgctgcagatggcacgttcgag
gactttaaggaacgcgtcaacaaagtcatgcctgtcataaaggaggccactgctaaagaa
agggcgatgatgggaagcagaggtgtagcagggactggagcttccctcaagcggaagaga
gacctcgacagtgaagagtcgaactcaaacgaatatttcttcgcgaaattcctcacgagc
cctgaccttctcgacttggagatcgccgatacccatttccgtcgccaatttctgttccaa
ctcctaattctgctcaatcaccttctgactttcactaaaaccgctaaagcggcttggacc
tccacacgcaaccgatcactgcagatggacttcacgctcgaggacaacgaagctcaatgg
gttcaagaatctattaccaaggttactgaggagttacggcaaacaacccccaatgggcgg
atctttgcagaaactatcagcgccattttagatagggagaagaactgggttcgatggaaa
aatgagctttgtgctccttttgacaaggagccttggtttgtcgagcaagaaggaaagttc
cttgatttgttcgatgcaactgcgcctattcgggcgaagatgagggaaccacctgaggac
tggaaatggcaattgggcacggaaccattgactgaaatatgggacatgggctacagagat
ttgactgatctccagaatccattccagcctggcgacgtgaaagatttcgtcaagaaaatc
aaacaagaagatgcacgcattgaattgcgaaaaagaaatttgaccaagaccgcagagcgc
ctcgccctggcacaagctagagctgcagctgcaaaggcagctgtgactacagaaacgaag
gaaacggttccgtcagcgagtacctcagctgaaacgttgtccgctccccgacccttagtc
ggatcaaatcaaacgagctcttctcttcatccttctcttcctccgaaacctggttccccg
gtgaagccatcactttctcaagataccgtacggaatgcaacacccgcgccagctgtacca
gttatagctatagctgctccagtgcccgctccttcgcctgcaccaacgccggcacccaca
gcagctcttcctgatgagcaaatatcgaaatttgaggagaataaacaacgatggtcatgg
ctcgcgctccgtacagcccgcgatcaatatttgcaacatttcggaaagataggaactggg
gacattgaacttctcgcgcaggaaattgagaaggaaaaagagaagccccaaaagggagag
gagtgttcagggttcaattcctttcgctcccctacgctccctaccgtgccaagaccgcgt
caaccacctatggcgacacacacatctcccctcaaa
DBGET
integrated database retrieval system