Laccaria bicolor: LACBIDRAFT_292475
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Entry
LACBIDRAFT_292475 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K27407
RNA-binding protein VTS1
Organism
lbc
Laccaria bicolor
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbc03019
]
LACBIDRAFT_292475
04131 Membrane trafficking [BR:
lbc04131
]
LACBIDRAFT_292475
Messenger RNA biogenesis [BR:
lbc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
LACBIDRAFT_292475
Membrane trafficking [BR:
lbc04131
]
SNARE
SNARE associated proteins
Others
LACBIDRAFT_292475
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vts1
SAM_2
SAM_1
Motif
Other DBs
NCBI-GeneID:
6071472
NCBI-ProteinID:
XP_001876154
JGI:
292475
UniProt:
B0CUZ5
LinkDB
All DBs
AA seq
618 aa
AA seq
DB search
MSLRPPSTSPSPSPVYENGKSIARQSMGPSARGTPTLAPASPRPGGQPSARPTSELLGSG
TMFQTPEAEALDQWFENLQNYEATLEDMAAASLDVNFKEELSAIEQWFKVLSEAERTAAL
YSLLQHSTQVQIRFFITVLQQMARSDPMTALLSPAMGGSMQSQMEAKLASIKSPGLKSGL
PSSPTTRNFSAGNRQSLALDNSSNFLSPESAANPGGQDAAATLAQQRAKLKASNAAHRIS
APVLASPGTDIRASWGPSTLLSQVTEQNPPVQEVVIGTSRPKSTEFSGTIGSPRPTETEN
NSWASMVNTPLIPMFKDTRPPPSVQAVDPAAPKHWSRNDAAPGVPRMGDPTSRRRNNKLN
GDNQNSGNIYDDNGNPINAGQHQGGAGVRNASGGWSGTRSPALSNTSSNRFGNDDNNNGM
NGLGMQMGGFGMGLGSPTMGMGMPLGGMQPLSPFNMNLNMLSAMGISPEAQLLAAQMAAS
GFGQQTNWLGMQPMSAGLNNRRNGPPSGRSPGLKSASSVGSRMDGNNTPKGEEDVDPALL
NDIPGWLRSLRLHKYTPNFEGAKWQDMVMMDEAALEAKGVAALGARRKMLKTFELVRKKM
GMEEPPNSALPSASDGRG
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttcgtccgccttctaccagtccgagcccgtcgcctgtatatgagaatggcaaa
tctatcgcacgccaatcgatgggaccgtcggctcgtggcactccgacgctagccccagcc
tcaccacgccctggaggacaacctagtgcaaggcccactagtgagctattgggtagcggt
accatgttccaaacgcctgaagcggaagcactcgatcagtggtttgaaaacctccaaaac
tatgaagccactttggaggatatggctgctgcctcgctcgatgtaaattttaaagaagag
ctcagcgccattgagcaatggttcaaagttctctctgaagcagagcgcacagccgctctt
tacagtcttctccaacattctactcaagttcaaatcagatttttcattaccgttcttcaa
caaatggctaggtctgatcctatgacggcgcttctcagcccagctatgggaggatcaatg
caaagccagatggaggccaaacttgcaagcatcaagtcccctggcctgaagtctgggcta
ccctcttcgccaaccacacgcaattttagtgctgggaatcgccagtcactagctctggac
aactcttcaaacttcctttcgcctgagtctgcggcgaaccctggtggtcaggatgctgcc
gccactctcgctcagcagagggcaaaactcaaggctagtaatgctgcacaccgcatttcc
gcgcctgttttagcttctcccggcacggacatacgtgcttcttggggaccctctaccctc
ttgagccaagtcaccgaacagaatccgcctgttcaggaggttgtcattggtacctctcgt
cctaagagcaccgagttctccggcaccatcggatctcctcgtcccacggagacggagaac
aacagttgggcaagtatggtcaatactcccctcatacccatgtttaaggacactcgcccg
cccccttccgttcaggccgtcgaccctgccgctccgaagcactggtctagaaatgatgcg
gctccgggcgttccgcgcatgggcgatcccaccagtcgtcgccgcaacaacaagctcaat
ggcgacaatcagaatagcgggaatatctacgatgataacgggaacccgatcaatgcaggt
caacatcaaggtggcgctggcgtaaggaacgcatcaggaggttggtcaggaaccaggagc
ccggcgctctccaacacatcctcgaacaggttcggaaatgatgacaataacaatggaatg
aacggacttgggatgcagatgggaggatttggcatgggcttaggaagcccgacgatgggt
atggggatgccccttgggggaatgcagccactgagtccgttcaatatgaatttgaacatg
ctcagcgcgatgggaatctctcccgaggctcagcttctggcagcacagatggccgcgagt
gggttcggacaacaaaccaattggctcggaatgcagccaatgtctgctgggctgaataac
cggcgcaatgggcccccgagtgggcgttcgcccggcctcaagagcgcgtcgagtgtgggg
agccgcatggacggcaacaacacgccaaagggagaggaggacgtggatccggcgctgttg
aacgacatcccaggatggttgaggagcttaaggctgcataagtatactccgaacttcgaa
ggtgcgaagtggcaggatatggtaatgatggatgaggccgcgctcgaggcgaagggcgtc
gcggcgctgggagcaaggcggaagatgttgaagacattcgagctcgtcaggaagaaaatg
gggatggaggaaccgccgaacagtgctcttccgagtgcttccgatggaagaggctga
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