KEGG   Laccaria bicolor: LACBIDRAFT_292475
Entry
LACBIDRAFT_292475 CDS       T01044                                 
Name
(RefSeq) hypothetical protein
  KO
K27407  RNA-binding protein VTS1
Organism
lbc  Laccaria bicolor
Brite
KEGG Orthology (KO) [BR:lbc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lbc03019]
    LACBIDRAFT_292475
   04131 Membrane trafficking [BR:lbc04131]
    LACBIDRAFT_292475
Messenger RNA biogenesis [BR:lbc03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     LACBIDRAFT_292475
Membrane trafficking [BR:lbc04131]
 SNARE
  SNARE associated proteins
   Others
    LACBIDRAFT_292475
SSDB
Motif
Pfam: Vts1 SAM_2 SAM_1
Other DBs
NCBI-GeneID: 6071472
NCBI-ProteinID: XP_001876154
JGI: 292475
UniProt: B0CUZ5
LinkDB
AA seq 618 aa
MSLRPPSTSPSPSPVYENGKSIARQSMGPSARGTPTLAPASPRPGGQPSARPTSELLGSG
TMFQTPEAEALDQWFENLQNYEATLEDMAAASLDVNFKEELSAIEQWFKVLSEAERTAAL
YSLLQHSTQVQIRFFITVLQQMARSDPMTALLSPAMGGSMQSQMEAKLASIKSPGLKSGL
PSSPTTRNFSAGNRQSLALDNSSNFLSPESAANPGGQDAAATLAQQRAKLKASNAAHRIS
APVLASPGTDIRASWGPSTLLSQVTEQNPPVQEVVIGTSRPKSTEFSGTIGSPRPTETEN
NSWASMVNTPLIPMFKDTRPPPSVQAVDPAAPKHWSRNDAAPGVPRMGDPTSRRRNNKLN
GDNQNSGNIYDDNGNPINAGQHQGGAGVRNASGGWSGTRSPALSNTSSNRFGNDDNNNGM
NGLGMQMGGFGMGLGSPTMGMGMPLGGMQPLSPFNMNLNMLSAMGISPEAQLLAAQMAAS
GFGQQTNWLGMQPMSAGLNNRRNGPPSGRSPGLKSASSVGSRMDGNNTPKGEEDVDPALL
NDIPGWLRSLRLHKYTPNFEGAKWQDMVMMDEAALEAKGVAALGARRKMLKTFELVRKKM
GMEEPPNSALPSASDGRG
NT seq 1857 nt   +upstreamnt  +downstreamnt
atgagtcttcgtccgccttctaccagtccgagcccgtcgcctgtatatgagaatggcaaa
tctatcgcacgccaatcgatgggaccgtcggctcgtggcactccgacgctagccccagcc
tcaccacgccctggaggacaacctagtgcaaggcccactagtgagctattgggtagcggt
accatgttccaaacgcctgaagcggaagcactcgatcagtggtttgaaaacctccaaaac
tatgaagccactttggaggatatggctgctgcctcgctcgatgtaaattttaaagaagag
ctcagcgccattgagcaatggttcaaagttctctctgaagcagagcgcacagccgctctt
tacagtcttctccaacattctactcaagttcaaatcagatttttcattaccgttcttcaa
caaatggctaggtctgatcctatgacggcgcttctcagcccagctatgggaggatcaatg
caaagccagatggaggccaaacttgcaagcatcaagtcccctggcctgaagtctgggcta
ccctcttcgccaaccacacgcaattttagtgctgggaatcgccagtcactagctctggac
aactcttcaaacttcctttcgcctgagtctgcggcgaaccctggtggtcaggatgctgcc
gccactctcgctcagcagagggcaaaactcaaggctagtaatgctgcacaccgcatttcc
gcgcctgttttagcttctcccggcacggacatacgtgcttcttggggaccctctaccctc
ttgagccaagtcaccgaacagaatccgcctgttcaggaggttgtcattggtacctctcgt
cctaagagcaccgagttctccggcaccatcggatctcctcgtcccacggagacggagaac
aacagttgggcaagtatggtcaatactcccctcatacccatgtttaaggacactcgcccg
cccccttccgttcaggccgtcgaccctgccgctccgaagcactggtctagaaatgatgcg
gctccgggcgttccgcgcatgggcgatcccaccagtcgtcgccgcaacaacaagctcaat
ggcgacaatcagaatagcgggaatatctacgatgataacgggaacccgatcaatgcaggt
caacatcaaggtggcgctggcgtaaggaacgcatcaggaggttggtcaggaaccaggagc
ccggcgctctccaacacatcctcgaacaggttcggaaatgatgacaataacaatggaatg
aacggacttgggatgcagatgggaggatttggcatgggcttaggaagcccgacgatgggt
atggggatgccccttgggggaatgcagccactgagtccgttcaatatgaatttgaacatg
ctcagcgcgatgggaatctctcccgaggctcagcttctggcagcacagatggccgcgagt
gggttcggacaacaaaccaattggctcggaatgcagccaatgtctgctgggctgaataac
cggcgcaatgggcccccgagtgggcgttcgcccggcctcaagagcgcgtcgagtgtgggg
agccgcatggacggcaacaacacgccaaagggagaggaggacgtggatccggcgctgttg
aacgacatcccaggatggttgaggagcttaaggctgcataagtatactccgaacttcgaa
ggtgcgaagtggcaggatatggtaatgatggatgaggccgcgctcgaggcgaagggcgtc
gcggcgctgggagcaaggcggaagatgttgaagacattcgagctcgtcaggaagaaaatg
gggatggaggaaccgccgaacagtgctcttccgagtgcttccgatggaagaggctga

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