Laccaria bicolor: LACBIDRAFT_293563
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Entry
LACBIDRAFT_293563 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
lbc
Laccaria bicolor
Pathway
lbc03082
ATP-dependent chromatin remodeling
lbc03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
LACBIDRAFT_293563
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
LACBIDRAFT_293563
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lbc01009
]
LACBIDRAFT_293563
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbc03021
]
LACBIDRAFT_293563
03036 Chromosome and associated proteins [BR:
lbc03036
]
LACBIDRAFT_293563
Protein phosphatases and associated proteins [BR:
lbc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
LACBIDRAFT_293563
Transcription machinery [BR:
lbc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
LACBIDRAFT_293563
SWI/SNF complex
LACBIDRAFT_293563
Chromosome and associated proteins [BR:
lbc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
LACBIDRAFT_293563
PBAF complex
LACBIDRAFT_293563
SWI/SNF complex
LACBIDRAFT_293563
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
Motif
Other DBs
NCBI-GeneID:
6074743
NCBI-ProteinID:
XP_001878977
JGI:
293563
UniProt:
B0D476
LinkDB
All DBs
AA seq
1841 aa
AA seq
DB search
MNMRLRASRSAGYNLYLHICLGDRNWDDIRKMTAACSNWKVKWSARPLECLLEDVVDTVH
CYASQRAGGWVSFSIAVVLWPVYTAKVIRGCEAITLQIKSHPRISTKLPRPPTFGPDSSV
ARKKRVRPSRRRSSSSPSTNEITGPASHPACVNPVSSFVFFLLGNFGEEYCYFDTSSQTN
SLILKQLQTQAHRNFTLRLDNPVMNTYPSNPSSSSNYSQSQSINPALLAGGFSNPQQQQQ
QRYGGGGGGFGGAGGMGGGVNPAQLMNGSGGGMNGQGQGSISANQLLHQQQQRQQHQQHM
MNGMNQMGGGGGMGNMVMGGMGGINPAALASSSSGNSSSSNMMNMNNVNINPMMLQNQTG
SGGPSQINTAAMLNMLGITREQFAALSPQEKNAAGNKAMAIINQQNQQMSMSMGGQGMGN
MMGGGAGNMMGGGGGGNMLGGGGGVGNMNNANMGGMQFAQQQNSNQQIAMGGFFDRPSSS
ASSHSTSNPSSNPQNQNQMMPPPPPRPTTAAGMHGMGGVMNMGGQQSGQGQGHPSRPGTS
MAHRSPTIPGPGLGGGMGGMGSIQEQRMMQERMHRQQIQQMHNQQQMEQQQQHQQQQDPR
FHQQQMEHQQRMREQGMHEQQRAQEQQRIQEQQQRMQLQMGIQRPSSRLSVGPPGQIPGA
GGNMGFNANAGGMMNGFPQKSSQTQQQGGNIFPNQSPLSSQPHIPLPQTQTPQQQRGGQP
FGSQQQHEGSPPPMSPYRGAKRKVGGPDGVMPGMGSPRIGGGMALPPTTPMGPPGIPRTI
SGDGLGGMPSPSTPTSGGLGNMNMNVGMPGGAGNIFQAQTQAMLQHQHQQQRRTQSPRPQ
SSMGMVPGGGGMDISIQRQRQGSIPPQQFPPGNQQTPQRQGSLPPSGMMGPPPQMSKPLD
PAGLMGIGVKSGMSGMGGMPGMVMPPPSAAPAIPLAGMHPPTAAPGVIGGGIPLAGPGAV
PGGAGMGVTPQQQQALASSLSAAGIPAAPGGLPASGPSVSGAGSAAAANLLAQLPPLPPG
VTLNPAITRVSAVPLIESVKRIPPLSEDDVKNVQGWIKVDKEYEVAFRRMKERMAVEARE
TFGPAGASWWEKGFPGGNLNRWRRGREQFDVRYPRRREKEGRDGRERKRGVRREGLRLPR
TLAPAEANRPEQLIPIRLEFDVEHHKMRDTFVWNLNDPVVTPEHFAQSLVEDYALPSSYH
SFIVKSIQDQLSDYKAHSANYDGEGGELSEPEDASIHRGVLDEESLSWWESWRKRVRAEG
ASRKGSKHGRKRRKVVKVEEPEDMCMDEGDGDDERPMTLEELELDEQSLHEDMRILIKLD
IIVGAMKLDDQFEWDLDNTNASPEDFADVYTQELGLCGEFKTAIAHSIREQVQTYQKSLF
LVGHQPSDGALVQDEDLKQSFLPSLMSGARPVSEVQMFTPLLNYLSDGEIDRTEKDRDKD
LNKRRKRNTRGRRGIALPDREPIRTYRTPAIGFPELDPATLALAAAANAPMSRRAAAAAA
SLTIANMVASENGTPFMPQSLPSQQAPQPPPTAQKEKKPKGLFKAPPIPPNTLRPRALVA
APTPSTAADVSKLPAPLDNDPPPSSNNVPALDSKAAKILSAKRAKELEREAKEKEFVDGQ
HPNYIDGVWHCSNCGCPESIAIGRRKGPLGDKSQCGTCGKFWHRHRRPRPVEYNADADYH
SGLKQREAEAKMPASKRKGAAAALRAQSTAATPMADISEPQTPARSNGDVDASSRQSPTP
AATLNDDDRAISPVSTASSASEPPLAQRVKLNGSHSKPPATPHPPPAAAVTSSTPPPINC
PGKLYTPGPGETLSNYEVHLKNRLHRQKVNERVTAAGSNGS
NT seq
5526 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgaggctccgagccagcaggtccgccgggtataatttgtatctgcacatttgc
ttgggtgatcggaattgggatgacattcgtaagatgacagctgcctgcagcaattggaag
gtgaagtggtcggcgagacctcttgagtgtttgctcgaggatgttgtcgacaccgtccac
tgctatgcgagccagagggcggggggctgggttagtttttcgattgcagtagttttgtgg
cctgtgtatacggcgaaagtcatacgcggctgcgaagcaattacgcttcaaatcaaatcc
catcccagaatctccaccaaactgccccggccgcccactttcggccctgattcttccgtc
gcccgcaaaaaacgagtcaggccatcccgacgacgtagctcctcaagcccatctacgaac
gaaataacaggtcccgcgagccatcccgcttgcgtaaacccagtctcttccttcgtcttc
tttttacttggcaattttggcgaggaatattgctattttgataccagttcgcaaaccaac
tctctcatcctcaaacagctacaaacgcaagcacataggaattttactttacgacttgac
aaccctgttatgaacacgtatccatccaatccctcttcctcctcaaattactctcaatcc
caatccatcaatccagccctcctagcggggggtttctctaaccctcagcagcagcaacaa
cagagatatggtggtggaggcggaggttttggcggggctggaggcatgggtggtggtgtg
aaccctgctcaattgatgaacggctctggcggtggaatgaacggtcaaggccagggttct
atcagtgccaaccagcttcttcaccaacagcaacaacgacaacaacatcaacaacacatg
atgaacggcatgaaccagatgggtggcggaggcggtatggggaacatggttatgggtggt
atgggaggcataaacccagccgctctcgcctcctcgtcttccggaaattcgtcctcctcg
aacatgatgaacatgaataatgtcaatatcaaccctatgatgttgcagaaccaaactggt
tccggtggaccctctcaaatcaacacagctgcgatgttgaatatgttgggcataacgagg
gagcaattcgccgcgctcagcccacaggagaaaaatgcagctgggaataaggccatggct
atcatcaatcagcagaaccaacagatgtcgatgtcgatgggtgggcaaggtatggggaac
atgatgggtggtggtgctgggaacatgatgggaggcggaggaggcggaaacatgttgggt
ggaggtggaggcgtggggaacatgaacaacgcaaatatgggtgggatgcaattcgcccag
caacagaactcgaaccagcaaatagccatgggtgggttctttgatcgaccatcaagctca
gcatcgtcgcattctacatccaatccttcgtccaacccacaaaatcagaaccaaatgatg
cccccacccccaccccgtccaaccaccgctgctggtatgcatggcatgggaggcgttatg
aacatgggaggccagcagtcgggccaaggacaagggcacccttcgcgtcctgggacgtcg
atggcgcatcgctcgcctactattcctggtcctgggttaggaggaggcatgggtggtatg
gggtcaattcaagagcagcggatgatgcaggagaggatgcatcgccagcagatacaacaa
atgcacaatcagcagcagatggagcagcagcagcaacatcagcagcaacaggatccgcgg
ttccaccagcagcaaatggagcatcagcagcggatgcgagagcagggaatgcacgaacag
cagagggcgcaggaacagcagaggatacaggaacaacaacagagaatgcagcttcagatg
gggattcaaagaccttccagtcgattgagcgttggtcctcctggtcagatacctggtgct
ggtgggaatatgggttttaatgcaaacgctggtgggatgatgaacggattcccacaaaaa
tcttcccaaacgcaacaacaaggaggaaacattttccctaatcaatcaccgctatcatct
caaccgcacattccgttaccccaaacacaaacaccacaacagcagagaggtggccaaccc
tttggttcccagcaacagcatgaaggctctccgccacccatgtctccttatcggggtgcg
aaacgtaaagtcggtggtcctgatggtgtcatgcctggtatgggatctccaagaattgga
ggcggaatggccttgccaccaacgactcccatgggtcctcctggcattccgaggaccatt
tctggagacggtttaggtggaatgccgtccccatcgacccctacttcaggcgggttgggc
aatatgaacatgaacgttggcatgccaggaggcgcaggcaacatcttccaagcacaaact
caagccatgcttcaacatcagcatcaacagcaacggcgaacccagtcgcctcgacctcag
tcttctatgggcatggttccaggaggtggtggtatggatatctcaattcaacgtcaacgt
caaggctcgattccccctcaacaattcccgcctggaaaccaacaaacaccccagagacaa
ggctctttacctccgtctgggatgatgggtcctcctccgcagatgtcgaagccgttggat
ccggctggcttgatgggaattggtgtgaaaagtgggatgtctgggatgggcggtatgcca
gggatggtgatgcctcctccctctgcagcacctgcgatcccactggcaggtatgcatcct
cccacagctgctcctggtgttattggtggagggattccgctcgctggtccaggtgctgtc
ccaggaggagcggggatgggtgttacaccccaacaacagcaagctttagcatcgtcgttg
tcggcagcggggattccggcggcaccgggcggattacccgcatccgggccaagcgtaagc
ggtgctgggtctgcagctgctgccaatttgctggcgcagcttccgcctttaccgcctggg
gtcaccctcaatccagccatcacgcgcgtcagcgctgttccgctgatcgagtctgtgaag
cgcattcctcccttgtcggaggatgatgttaagaatgtacaagggtggatcaaggtggac
aaggagtatgaggttgcttttaggcggatgaaggagaggatggcggtggaggctagggag
acttttgggcctgctggtgcgtcgtggtgggagaaggggttccctggtgggaatttgaat
cgctggaggaggggaagggaacagtttgatgttaggtatccgagacgtagggagaaggag
ggaagagatgggagagagaggaagagaggtgttagaagggagggtttgagattgccgagg
acgctggctcctgcagaggcgaatcgccctgaacagcttattcccattcgtttggaattt
gatgttgagcaccataagatgcgggatacgtttgtttggaatttgaatgaccccgtggta
accccagaacatttcgctcaatcccttgtggaagactacgccctcccttcctcttaccac
tccttcatcgtcaagtcaatacaagatcaactcagcgactataaggctcattcggcaaat
tacgatggcgagggtggtgaactctctgagcctgaagatgcatccatccaccggggagtt
cttgatgaggagagtcttagctggtgggagtcgtggcggaaacgcgtccgtgctgaaggt
gcatctcgtaagggtagcaaacatggaaggaagcggcggaaggttgttaaagtggaggag
cctgaggacatgtgcatggacgagggtgatggtgacgatgaaaggcccatgaccctagaa
gaactcgagttggacgagcagagtctccacgaggatatgcggatcttgatcaagttggac
atcattgtcggagctatgaagcttgacgatcagttcgaatgggatctggacaatacaaat
gcgtcaccagaagatttcgcggatgtttacacccaagaactcggattatgtggagaattc
aaaactgctatcgcccactcaatacgagaacaagtgcagacataccaaaagtccctgttc
ctcgttggccatcaaccttctgatggtgctcttgtgcaagatgaggacctcaaacagtcc
ttcctgcccagcttgatgtcgggcgctcgtccagtgagcgaggttcagatgttcactccc
ctcctcaactaccttagcgacggggagatcgacagaacggaaaaggatcgggacaaggac
ctgaataagcgcagaaagcgtaataccaggggtagacgcgggattgctttgccagaccga
gagccgatcaggacttatcgcacgcctgctattgggttcccagaacttgacccagcaacg
ttggctcttgccgccgctgcgaacgcaccaatgtctcgtcgggctgctgctgctgctgcc
tcgctcacaatcgccaacatggtcgcttctgagaatgggacgccgttcatgcctcaatcc
ttgccatcccagcaggcgccacagccgccgcctactgcgcagaaagagaagaagccgaag
ggtctattcaaggcacctcctattcccccgaacaccctgcgacctcgtgcccttgttgct
gctcccacgccgtctacagctgcagacgtctcgaaattacctgctcccttggacaacgat
cctcctccgagttccaataatgttcctgctttggacagcaaggctgccaagatcttgtcg
gcgaagagggccaaggagcttgaacgagaagccaaagaaaaggaatttgttgatggacag
cacccgaattacattgatggcgtttggcattgctcgaattgtggctgtcctgaaagcatt
gctattggacggagaaaagggcctctgggtgataaatcgcagtgcggcacatgtgggaag
ttctggcatagacataggaggccacggccggtggaatacaacgcagacgccgactatcat
tctggcttgaagcaacgtgaggctgaagcgaaaatgccagcgtcaaagaggaaaggtgcc
gcagccgccttgcgcgcccagagcacggcagctacgccgatggccgacatttcagaacca
cagacgccagctaggtctaatggagacgtggacgcgtcttctcggcagtctccgactcca
gcggctactctgaatgacgatgaccgggcaatatcaccagtatcaaccgcttccagcgct
tccgaacccccgcttgctcagagggtgaaactgaatgggagccatagcaagccaccggca
acacctcatccaccaccagctgctgctgtgacgtcctctacccctccacctataaactgc
cctggcaagttgtatacacctggtccaggcgaaaccctctccaattatgaagtacattta
aagaatcgattacatcgccaaaaggtcaatgaacgtgtgactgctgctggttccaacgga
tcatag
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integrated database retrieval system