Laccaria bicolor: LACBIDRAFT_296372
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Entry
LACBIDRAFT_296372 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K10981
DNA polymerase IV [EC:
2.7.7.7
]
Organism
lbc
Laccaria bicolor
Pathway
lbc03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
LACBIDRAFT_296372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbc03400
]
LACBIDRAFT_296372
Enzymes [BR:
lbc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LACBIDRAFT_296372
DNA repair and recombination proteins [BR:
lbc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
LACBIDRAFT_296372
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_thumb
DNA_pol_B_palm
DNA_pol_lambd_f
HHH_8
HHH_5
Motif
Other DBs
NCBI-GeneID:
6075720
NCBI-ProteinID:
XP_001880411
JGI:
296372
UniProt:
B0D8M6
LinkDB
All DBs
AA seq
527 aa
AA seq
DB search
MGGPHTTDPLKVYIIQAKLDQDTIIELHNLLERDKYYYNGSAKFTLCNDINESDVVVTAI
KMRKRLERHIDWEIAKQKAIVTPQWLRDSAQAGKAISFQDYAALSEINNSNIIHDSPENQ
SRASQFLSRPSFQLFNPSSLEEEPTNERVKANWRLRYACKRASPLVCKNQPLLVELGVLY
RARELEGLEVNALGYERAIAVIKSYPNLIAHENFETDIVHLPFLGEKMLFKIREYLTTGR
IQESETTRASQRFQSLSAFSSVYGVGPATARKLYDDGLRTIDDMKRYYDVQEDTEVPQLG
ANSVTNDLIRKDQIPNLSTKVGLALYEDLETPIPRSEVEQIHDLVMQEARYLMPECISTV
VGGYRRGKPYCNDVDIVIGCPNIQSGGNQVKALGEKLIKRLYDRGVLCLSGFHAQDSVRG
AHLNLLEKAMTIFALPKNAVHQRVHRRLDLIFAAPETYWTAIIGWTGSKMFERDLRLWAK
VEMGMKFDSSGLTRRYDSKLFMPSSERHVFEILGLDWIDPTMRNADV
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgggtggcccacataccaccgaccctctaaaggtgtatattatccaggccaaacttgac
caagacacaatcattgaactccacaacttgcttgaacgagataaatactactacaacggc
tctgcaaaatttacgctttgtaatgacattaacgaatcggacgttgtagtgacggccatc
aagatgagaaagcgcttagaaagacacattgattgggagatagcgaaacaaaaagcgatt
gttacaccgcaatggctacgcgattccgctcaggctggcaaagcaatttctttccaagat
tatgctgctctttccgagataaacaatagtaatattatccacgatagtcccgaaaaccaa
tctcgagccagccaattcttgtctcgaccctctttccaattattcaatccatcgtctctc
gaggaggaaccaaccaatgaacgagttaaggccaactggagattgcgatatgcttgcaaa
cgtgccagtccgctggtttgtaagaatcaacccctcttggtggaactgggtgttctttac
cgcgcaagggaactggagggcctggaggtcaacgcgcttgggtatgaacgagccattgca
gtgataaagtcctatccgaacctcatcgcacacgagaactttgaaactgatattgttcac
ttgccatttctaggagagaagatgctcttcaagataagagagtatcttaccactggccgt
atccaggaaagcgaaaccactcgagcgtcgcaacgcttccagtcgttatccgctttctcc
agtgtctacggcgttggtcccgcaaccgctcgcaaactctacgacgacggcctgcgcaca
attgacgacatgaagcgatattatgatgtccaagaagatacagaggttccgcagttggga
gcgaactctgtcacaaatgatcttataagaaaggatcaaatcccgaacttgtcgaccaaa
gttggactggctctttatgaggacttggagacacccataccacgatccgaggtcgaacag
atccacgatttagttatgcaagaagcgagatatctgatgcccgagtgcataagtactgtc
gttggcgggtatcggcgaggaaagccgtactgtaacgatgttgacattgttataggatgt
ccaaatattcaaagtggcgggaatcaggtcaaagccctgggcgagaagctaatcaaacgg
ctctacgacagaggagtgttatgcctatcgggattccatgcgcaagactctgtgcgcggt
gcgcatttgaacttgctcgagaaagccatgacaatttttgccctgccaaagaatgctgtt
caccagcgggttcataggcgtctcgacctgatattcgcagcaccagaaacgtactggact
gcaataattggatggacaggatccaagatgtttgaacgagatctgcgactctgggcgaaa
gtcgaaatgggaatgaaatttgatagttcggggctaacgcgccgttacgattcgaagctc
tttatgccatcaagcgaaagacacgtttttgaaattctgggactggactggatcgatccg
acaatgcgaaatgcggacgtatag
DBGET
integrated database retrieval system
