Laccaria bicolor: LACBIDRAFT_296446
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Entry
LACBIDRAFT_296446 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K15163
mediator of RNA polymerase II transcription subunit 12, fungi type
Organism
lbc
Laccaria bicolor
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbc03021
]
LACBIDRAFT_296446
Transcription machinery [BR:
lbc03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
LACBIDRAFT_296446
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med12
Med12-LCEWAV
Motif
Other DBs
NCBI-GeneID:
6075956
NCBI-ProteinID:
XP_001880446
JGI:
296446
UniProt:
B0D8U3
LinkDB
All DBs
AA seq
1648 aa
AA seq
DB search
MRERKDDKQSSTSLPVYESDPPFWLPKMHSAADIGYAGFHPPRPGQDEDVLSETNVKNGF
ILTQPVSVETFSAQTMINENLKSEDSLAKLEELMNEVFIKRADHIPSVPPSSFRMPTRVT
LNDAKRQAWFADLANPDVPLYKLGKSVPHGAKGHDLLDLLHANNVAISRAVWLLRVFGAN
ETAGLRNKPSYNPTLYSVEWANVVTSYIKKQLLEIALPSAPRPGLNIKQTFKGVLSDLDS
REKWISRFMYCLKLLRTFYAEGLVDHQTFLVWIVQQMGCCNLAQAGFLTRLTEEYLDDIL
GSRALARPLVEACLGKMSEIGTASAQEFLSGTEESLKHLLQRSCLILPDAFIGPRMWLAY
PSIIERVMTVDSSNHLNDWFLSQNIQDIRQSIFANFLDVRKRNEALLFCNPPPHMSIRLQ
AAVSDVKLLNSISSDTEMSSVTFFGNDFNDSPFFQEKLDMLLSWCVTPLQYGNHRPFAAV
TLIKNWRDKACERATRRDFITPNELLQDQLFDWLDKSDVAGEPNNIRDVALLYGKLVKHE
LFSYASYIQRLIARGEPGLSFAEDIESRHRRFLSWIPLFQSTSSLINQRKVTLHGVRARN
IPEDMTEREIRKEIRSVLPEVFGGVIRSTLETTADLLANCNALMTGTRFEQVRTFRQWLL
PALQKHIASNNDRPSALRAYLVTVELMTSTKCFHSVLDLTFCMLEHSTDSDSMTAVLDTF
HRHAVIWACMGAMNAIVSALDTAHQVWKLRGTQSRPLLALLIEFDNGRYLDELSRTRITA
EMSTFTNALQPVVGRPNHVPDILPEILLLAGDPDDNAPAILANGLWIKYRMSLDWAWKTW
DNTVASLRQVPSMTSDVNSRRLHALRYGTFLWRVDQHLPNGLDMDVLRWFNGPGKGVLVA
LSPDSWDMLMTILVYLIVHGALETTTILSGLVYPAWELGAFSSMEQAAFPETYLRAANDL
CHRLLLQENDSGDAIPPTNLFEVQCLRTRRQVVYYEPHFPCLVTSIPVLISLENNPNISG
DLRRDSTSLRQRLCQDGGFRQGAYRSMDVVREAFENSPYFKDMGSEILGKQMIAGLRMIL
CDSTDDTNLYDWPEVTRLLSPWKVAATTIQMQFQIKQLGRSLAQDITHDNASANLDKLTV
MLFNHTNTAEEAYYVGEMARGAGSAVVAKFIKNGLKCIAENLSATSCDEAPGIECPGSVA
ELLRVLTHVSSPFRDGLSSLPSLDPSTQTLFFEVIHAKLTTLQPQCISKEKLYLQRDNII
LLARLLQFILNFRGSWSSRAKELGSDLTTMVFHVALHHATGDNLDAVVYSILIDTLLFLY
DGAHLLSLFHLQNLKNDFVLPEIPSDGKVGAFDPYRLYPDIPVTDLPSDLPPVYRKQCLS
LLCRTTTISTVPDLVNSHRDTQGNLVLGPYVVNRPWEWIENLEPSVLDRKEGEKERDDKD
SQKTKYPVKNSGSLSLDAFGARLTGDSIVPIVADGCNLRTEGNIRSFQDGTSSDSLFIRD
WRETRLDLKLEIPTSLRSRPKSDFPVGTGPIHTASLRPDPRTTPKASPASSIVSRSSAHD
FSSSARQQSPGQGSHGHSNTGMGEASGDVAGASAMTLRKEPTSKRKATALVSDEVEIIEG
PVPVRAGTNSKKAKVTKAPVAKAKAKRK
NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaacgaaaggatgacaaacaatcttccacaagtcttccagtatatgaatctgac
ccgcctttttggctccccaagatgcacagtgccgcagacattggctacgcgggatttcac
ccccctcgtccaggccaagatgaggacgttctctcggagacaaatgtaaaaaatgggttc
atccttacccagcccgtgtcggtcgagacctttagcgctcaaacaatgataaacgagaac
cttaaatccgaagattccctcgctaaattagaagaactcatgaatgaagtctttattaag
agagcagaccatattccttccgttccgccatcgtcatttcgcatgccaacaagagttact
ttgaacgatgcaaagcgtcaggcatggtttgcagacttggccaacccggatgtaccattg
tacaaattgggcaaaagtgttcctcatggcgcgaaaggtcatgacctgttagacctactg
catgcaaacaatgttgcaatctctagggctgtttggctccttcgcgtttttggcgcgaat
gaaacggcggggcttcggaataagccctcctacaacccaacgctatatagcgtcgagtgg
gccaatgttgtgactagctacattaaaaagcaactattagaaatcgcgttgccaagcgcg
ccgcgtcctgggttgaacatcaagcaaacattcaaaggagttttatctgatctggatagt
cgagaaaaatggatatcccggtttatgtattgtctcaagctccttcgaactttctatgct
gaaggtttggttgaccatcaaacttttcttgtatggatagttcagcagatgggatgctgc
aatctggcgcaagctggctttctcactcggcttacggaggaataccttgacgatattctg
ggtagtcgagcgttggctcgcccgttagtcgaggcgtgtttaggtaaaatgtcggaaatt
ggcaccgcttctgcgcaggagttcctttccggcacggaagaatccttgaaacatctcctt
cagcggtcatgtctcattttgccagatgccttcattggtcctcggatgtggctcgcatac
ccctccattatagagagagtcatgacagtggatagttcgaatcacttgaatgactggttt
ctcagtcaaaatattcaagatatacggcaatcgatcttcgcaaactttttagacgtaaga
aagcggaacgaggcattattgttttgcaatccacctccacatatgtcgattcgacttcaa
gcggccgtttccgacgtgaagttgttaaattccatttcaagtgacaccgaaatgagcagc
gtgacgttctttggcaatgatttcaatgactcgccgttttttcaagaaaaactagacatg
cttcttagctggtgtgtcacccccctgcagtatggtaatcatcggccctttgccgcagtc
actcttatcaagaattggcgtgacaaagcgtgcgagcgggctacgcgcagagattttatc
actcccaatgagttgttgcaggatcagctttttgattggcttgacaagtccgatgttgca
ggcgagccaaacaacatccgagatgttgctttgctctatgggaaactagtgaagcacgag
ctattttcatatgcaagttatattcagcgactaattgctcgtggagagcctggtctatcc
tttgccgaggacattgaatcccgccatcgacgatttttaagttggatacctctttttcaa
tcgacgtcatccttaatcaaccaacgcaaagtcacgctgcacggtgttagagccaggaac
atacctgaggatatgacggaacgtgaaatccgcaaggaaatccgatctgtgctgccagaa
gtattcggaggtgtcatccgatctacattggaaacaacagcagatcttctcgccaactgt
aatgctctgatgacaggtactcgttttgagcaagttcgtacttttagacagtggctgcta
ccagcgctccaaaaacacatcgcgagcaataacgatcgtccttcggcactcagagcatat
ctcgtcaccgtggagctgatgacttccacaaaatgcttccattctgtgctcgacttgaca
ttttgcatgctggaacactccacagattccgattcgatgacggcggtcttagacacattt
catcgccatgcggttatatgggcatgtatgggcgctatgaacgcaatcgttagcgctcta
gataccgcccatcaagtttggaagcttcgcggaacccagtctcgtcctttattagcgttg
ctcatcgaatttgacaatggtcgttatctcgatgagttatctcgcactcgaatcaccgct
gaaatgtccacttttaccaatgctcttcaaccggtcgtagggcgaccgaatcatgttcca
gatatccttccggaaatattacttttggcaggagacccagatgacaacgcacctgccatc
cttgccaatggcctttggataaaatatcgaatgtcccttgactgggcatggaaaacttgg
gacaacactgttgcgagccttcgtcaagtcccaagtatgacatcagacgtcaactctcgc
cgacttcatgcactacgctacggcacatttttgtggcgagtggatcagcatctgccgaac
gggcttgacatggatgttctgaggtggtttaatggtcctggcaaaggcgtgctcgttgca
ctcagcccagattcatgggatatgttaatgactatccttgtctacctcatcgtgcatggt
gcactggaaactaccactatcttgagtggactagtttatcccgcttgggagttgggggct
ttctctagtatggaacaagcagctttcccagaaacgtatctccgtgccgcgaatgatctg
tgtcaccgcctacttttacaggaaaacgacagtggagacgcaataccaccgaccaatctt
ttcgaggttcaatgtctcaggacaagacgtcaagttgtctattacgaacctcatttccct
tgcctggtgaccagcattcccgttttaatttctctcgaaaataatccaaatatctccgga
gaccttcggcgcgattcgacgtctttgcgacaacgcctctgtcaagacggaggattccgc
cagggggcataccgtagtatggacgtcgtccgcgaggcttttgagaattcgccctacttc
aaagacatgggctccgagattttaggtaaacaaatgatagctgggttgcgaatgattttg
tgtgactcgactgatgacacgaacctctatgattggcctgaggtcacgcgtttgctcagc
ccgtggaaggtcgcagccacgaccatccagatgcaattccagatcaagcaactaggccgt
tcccttgctcaagatattacccatgataatgctagtgcaaaccttgacaagttaacggtg
atgcttttcaaccacactaacactgcagaggaagcatattatgtcggagaaatggctcgt
ggagcaggtagtgctgtcgtggccaagtttatcaaaaacggcctgaaatgcatcgcagaa
aatttatcggcgacttcatgcgatgaggcgcctggaatcgagtgtcctggttcagtggct
gaacttcttcgcgttcttacccatgtaagctcgcctttccgagacggattgtcatctctt
ccctcgctggacccttccacgcaaactctcttctttgaagttatccatgcaaaattaacg
acacttcagccccaatgtatctcaaaggaaaaactttatttgcaaagagataatataatc
cttctcgctcgattgctacagtttattcttaattttcggggtagttggtcttccagggcg
aaagaactaggaagtgatctgaccaccatggttttccatgttgctttgcatcatgccact
ggggataaccttgatgcagttgtatattcgatcttgattgatactcttctatttctttac
gatggtgcgcatttactcagcttgttccacttgcaaaatttgaaaaacgattttgttctt
ccagagataccctctgatgggaaggtgggcgcctttgacccctaccgactatatccagat
ataccagtgaccgacttgccgtcggatcttccccccgtgtaccgaaaacaatgcttgtcc
cttctatgtcgtaccacgacaatttctacagtcccagatctggtaaattcccatcgtgac
acacagggaaatttagttctcggaccatacgtcgtcaataggccttgggagtggatagag
aatctcgaaccatccgttctagataggaaggagggcgaaaaggaacgggacgacaaagat
agccaaaagacgaagtatccggtaaagaactctggctccctgtcactggatgctttcgga
gctcgactgacaggggacagcatcgtgccgattgtagccgatgggtgcaatttgaggacg
gaaggcaatatacgttcttttcaagacggcacatcatctgatagccttttcatacgggat
tggcgagaaacaaggctcgaccttaagttggagatacctacaagtcttcgttcgcggccg
aagagtgactttcctgtcggaacaggacccatccataccgcatccttacgacccgaccct
cggacaaccccaaaggcttcccctgcatcgtctatcgtctcccgttcatctgcacatgat
ttttcatcttccgcacgacaacaaagtcctggccaaggttctcatgggcactctaatacc
ggtatgggcgaggccagtggcgacgttgccggggcctcagcaatgactttacgcaaggag
ccaacgtctaaacgcaaagctacggcgttggtcagcgatgaagtcgaaatcatagaggga
ccagtcccagtacgcgcagggacgaattcaaagaaagcgaaggtcacaaaggccccagta
gcgaaagcgaaggctaagaggaaataa
DBGET
integrated database retrieval system