Laccaria bicolor: LACBIDRAFT_296492
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Entry
LACBIDRAFT_296492 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
lbc
Laccaria bicolor
Pathway
lbc04120
Ubiquitin mediated proteolysis
lbc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
LACBIDRAFT_296492
04120 Ubiquitin mediated proteolysis
LACBIDRAFT_296492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lbc04121
]
LACBIDRAFT_296492
Enzymes [BR:
lbc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
LACBIDRAFT_296492
Ubiquitin system [BR:
lbc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
LACBIDRAFT_296492
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-rbx1
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-ANAPC11
zf-RING_16
zf-C3HC4_3
zf-RING_11
zf-C3HC4_4
zf-RING-like
Prok-RING_4
zf-RING_Vps41
FANCL_C
zf_RING_Vps8
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
6075953
NCBI-ProteinID:
XP_001880467
JGI:
296492
UniProt:
B0D8Y4
LinkDB
All DBs
AA seq
782 aa
AA seq
DB search
MPLNQILRQRSHALVSFLNANRILLYTLTSTIAVAAVITNALKNHSNFYSVAIYLSKSSR
SVLALANFGFLVALLCGHIVQKIFFGSLRPSEVERLYDRLWFFITESLLAFTIFRDEFDI
SFALMFGFLLFVKSFHWLAGDRIEWMDQRPYPGPSVVFHIRMTILFGMLWTTDCLMFLFA
AEHTISVGVGGMVLFASEYAILMASVMNTILKYLLSSYELRRAGRRGGENAPPWENKSMW
VFYIELATDFLKLTTYLIFFTIIITFYGLPLNIIRDVYITARSFVTRLRALHRYQTATRN
MDQRYPNATEEELGAMSDRTCIICREEMIFQAAPPPNSDGPNTTPKKLPCGHVFHFYCLR
SWLERQQSCPTCRRTVLETPGAPRAADIPAVPVAGAAPQQANQRGFQILNPQDANNPLGH
PLGFVGRLFGAPAQAPGPLPANQNNNAQNAVVAGQGPQGILIQYQIQYQLPRHNAPQEPQ
HIQLRQPVPRFPGLPGPGGSWQQWPQSRPASQANSTSSTSTAGSETPQNTDPFPTPSASV
GGVRSGSNSPTSTSSDPGTPETARDAAALAAIRRLGGNALDASRSPSQRPAKVNTLQSSP
SATNAPKLIPLYNFNLQNPPSQHRSPIAANGVRTSSPPWRREPPIRSENGFIFPNLHPEQ
TRQQDPRVSVLPSSPTEQQLQIMDRLTREAIDERLKVLEGVSGTLHRCINDLMRMRSVLP
PIPAVPSTSNDSSDASTIPTELQKTEDDDGSAIDSSPESVLSKLLQSEPHTANNSSNGSG
VE
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgcccttaaatcaaatcctgcgtcaaaggagccacgcgttggttagcttcctcaacgcc
aacagaattctgttgtacacgctcacgtccacaatcgccgttgccgctgtcatcacaaat
gcgctgaagaatcacagcaacttttactctgtcgctatttacctctctaaaagcagtcgt
agcgtccttgctttggctaactttggctttcttgtcgccctcctctgtggccatatcgtg
cagaagatattctttggaagccttaggcccagcgaggtggagcgtctgtacgatcgcctc
tggttcttcatcactgagtcacttctggctttcaccatattccgcgacgagtttgatatt
tcgtttgctctaatgtttggcttccttctgtttgttaaatcattccactggctggcaggg
gatcgcatagaatggatggatcaacggccatatcccgggccctccgttgttttccacatc
cgaatgacaattctctttggaatgctatggaccactgactgccttatgtttttgttcgct
gcagaacataccatctcagtcggagtaggtggtatggtcttgttcgcaagcgagtatgcc
atcctcatggccagtgtaatgaacacgattctcaaatatcttctttcctcatacgagttg
cgaagagcgggtcggaggggcggggagaatgcaccaccatgggaaaacaagagcatgtgg
gtattttatattgaattagctacagattttctaaagctgacgacctacctcattttcttc
accatcatcatcactttctacggactgccactaaacatcattcgagatgtgtacataacg
gcccgttcttttgtgacgagacttcgagcacttcaccgataccagacggcaacacgtaac
atggatcagcggtacccaaatgcaacggaggaagagcttggggctatgagtgaccgcaca
tgcattatttgtagagaagaaatgattttccaggccgccccaccacctaattctgacggc
ccaaacactactccgaagaaattaccttgtggccacgtatttcatttttactgtcttcgc
tcatggctcgaacgccaacaaagctgtcccacatgtcgccgtacggtgcttgaaacacct
ggcgcaccgcgagccgctgacattcctgctgtgcccgtagcaggagcggcgcctcaacag
gccaaccagagagggtttcaaatcctcaacccacaggacgccaataaccccttgggccat
ccactcggcttcgttgggcgcctgttcggcgcccctgcccaggctccaggtccgcttccc
gcaaatcaaaacaacaacgcgcaaaatgccgtcgtggcaggtcaaggtcctcagggaatt
ttgatccaatatcaaatccagtaccaacttcccagacacaacgctccccaggaacctcaa
cacatccaactgcgacagcccgttcctcgatttcctggcctccctggccctggcggaagt
tggcaacaatggccccaatcacggccggcgagccaggccaattctacatcatctacatcc
actgcgggctcggagactccacaaaacactgacccttttccaaccccctccgcctctgtt
ggcggcgtgaggtcaggatccaattcaccgacgagtacatcctccgaccctggaacaccg
gagacagcaagggatgcagcggctctcgcagctatacgtagacttggcggtaatgcgctt
gatgcctctagatcgccttctcagcggccagccaaggtcaacacactccaatcgtcaccg
tcagctacaaatgctccaaaactaatccccctatataatttcaatctgcaaaatccacct
tctcaacatcgatctccgattgctgcgaacggcgtaaggacgtcctcgcctccatggcgt
cgggagcctccaattcgtagtgagaacggatttatcttccccaacctccatccagaacaa
actcgtcaacaagaccctcgggtgtcagtcctgccttcgtcaccgactgagcaacaactt
caaataatggatcgactgacccgagaagctatcgatgagcgtttgaaggttctcgagggc
gtatccgggaccttacatcgatgcatcaacgacttgatgaggatgcgcagcgtactgcca
ccaatcccagcggttccaagcacaagcaatgattcgagcgatgcttcgacaattccaaca
gagttgcaaaaaactgaggatgatgatgggagtgccattgattcgagtccggaaagcgtt
ttgtctaaactccttcagtcggaacctcatacagcgaacaactcttccaatggctcagga
gtagaataa
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integrated database retrieval system