Laccaria bicolor: LACBIDRAFT_297356
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Entry
LACBIDRAFT_297356 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lbc
Laccaria bicolor
Pathway
lbc03420
Nucleotide excision repair
lbc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LACBIDRAFT_297356
03430 Mismatch repair
LACBIDRAFT_297356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbc03400
]
LACBIDRAFT_297356
Enzymes [BR:
lbc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LACBIDRAFT_297356
DNA repair and recombination proteins [BR:
lbc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LACBIDRAFT_297356
MMR (mismatch excision repair)
Other MMR factors
LACBIDRAFT_297356
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
AAA_11
Motif
Other DBs
NCBI-GeneID:
6076283
NCBI-ProteinID:
XP_001880993
JGI:
297356
UniProt:
B0DAK6
LinkDB
All DBs
AA seq
1055 aa
AA seq
DB search
MEVNFLNSLNDAQLRGQTRPSISVIILLTRTTLVAVKYWPETPLQILAGPGSGKTKVLTS
RIAHLILNHHLPPFSICAVTFTNKAANEMRERLTKLIGKERTSQLRMGTFHALCARFLRK
YAHLVKLAENFTVCDAEESKKIIQALLKPYTAYLASENLDLQPGRVVSSISKAKSKEQSG
SVFLEEVIKAERRIRQRNGLPLGDDVEEKKTIDRIIGEIFLEYEKTLKRNNALDFDDLLT
YGVKLFTKNDETVIWCRHILVDEFQDTNITQYKLMRALAIARCVTIVGDPDQSIYGWRSA
EVGNLSKMRRDFPDTEQVLLEENYRSTAAILKASLAIISQDKSRIQKSLHTSHPNGFTPV
LYQVQTEHEEAAFIAIEMKRLVAHMGGALNWGDFVILLRFNALSRVIETALQKEGIPSRV
LGGHKFFERLEVKDLLAYLQVVDNPNFVPAFKRAVNVPGRGIGEKTVAELIGRAEKSNQS
PLAIVEAICDNKAPDIKPAVKRKVAPFVTAIRSLRAQAHNSSSPADLVRKLVDLIKYEDH
LKKTQSDWESRWENVKELITFASEMEAQNQAEEAADAVAGGDNSIEMSTTPLRQFLQASM
LSSEGDNQSEEGNKDKVTISTCHSAKGLEWPVVMIPSVDQNTFPFYRSEDTAEERRLLYV
ACTRAQSLLYVSRATTRMVAGETKSKELSEFISSVLNDNGLKNEMAFFSQQIPFFTQEDR
ATIATVLQRPPPEEAEVQRRVATFERSGREHPMQIYWGGGHHVAPSRPKNAYSIGNASYV
WSAGGGGITNVPQPGFIRPAIPTPPATSKSGYVSLSSSSGGENRILGTSSAPFIRLQDPS
SRPTNRAREVQVASSSKTTMSAMPLCMPSSDDNLGNWNASSPLARDATQPPCFPSSLDHN
FYDSSPMRPSSFHSASRQPRRAPQAIEIMDSNKPALPHTLSRREPKIPQVAPASPKIFDE
DQPPTLRTPLVVSTPMTQSLQPTALALQKTGVKQPQIAPIFDENQPPDTIATPMPISRPA
QPIVPSALPKTGVKRRLGMGRITSGYSNKKFKPPA
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcaactttctcaactcgctaaatgatgctcaactgagaggtcagacgcgacct
tctatatccgtcatcattctattgacaaggactactcttgtagccgtaaagtactggcca
gagacccctctacagattcttgcaggcccaggcagtggtaaaacaaaggtcctgacatct
agaattgcacatctaattctcaatcaccatctgccaccattctctatttgcgctgttaca
tttaccaacaaagctgcaaacgaaatgcgggaacgactgacgaaactgatcggaaaggaa
aggacgtcacaactcagaatgggaactttccacgctctttgcgcaagatttctccggaaa
tatgcgcacctcgtcaagcttgctgaaaacttcactgtatgcgacgcagaggaaagcaaa
aaaatcattcaggcactcctcaagccctacaccgcctatctcgcctcggaaaacctcgat
cttcagcctggacgagtagtctcttcgatttccaaagccaaatcgaaagaacaatcaggt
tctgttttccttgaagaggtgatcaaggccgagagaaggattaggcaaaggaacggactc
ccgcttggcgacgacgtcgaggaaaagaagacgatcgaccgcatcattggcgaaatcttc
ttggaatacgagaaaacgctgaagcgaaacaacgccttggattttgacgaccttttgaca
tatggcgttaaactatttacgaaaaatgacgagaccgtcatatggtgtcggcatattcta
gttgacgaattccaagatacaaacataacgcagtataaacttatgagagctctcgcaatc
gcccgatgtgttaccatcgtcggggatcctgatcaatccatctatggctggcgctctgca
gaagtgggaaatctttcgaaaatgagaagagatttcccggacacggaacaagttctatta
gaggagaactaccgttctacagctgcgattctcaaggccagtcttgcaatcatatctcaa
gacaaatcgcgcatacagaagtcacttcacacctcccatccaaatggcttcactcctgtc
ttatatcaagtccagacagaacatgaggaagcagctttcatcgcgatcgagatgaagagg
ttggtggcccacatgggtggggcacttaattggggagattttgtgatactcctccgtttt
aacgccttatcgcgggttattgaaaccgcgctgcaaaaagagggtatcccaagcagggtg
cttggtggtcacaagttctttgaacgattagaggtcaaagatcttttggcatacttgcag
gttgtggacaacccaaactttgttcctgcgttcaagcgagcggttaacgttcccggtcgg
gggatcggggagaagacggtggcagagctcattgggagggcggaaaagtcaaatcagtct
ccactcgcaatcgttgaagcaatttgcgacaataaggcccccgatatcaaaccagccgtg
aaacgaaaagtcgctccgttcgtgactgctatacgaagcttgcgcgcacaggctcataac
agttcgtcacctgcagaccttgtccgcaaactggttgacttgatcaagtacgaggaccat
ctcaagaagactcagtcagactgggaaagtagatgggagaacgtcaaggaactgatcact
ttcgccagcgagatggaagctcaaaaccaggctgaagaggctgcagacgccgtagctgga
ggagacaattcgattgagatgagcaccacccctctgcggcaattcctacaagcttcgatg
ttgtcctctgaaggggataatcaatccgaggagggaaataaagataaagtgacaatatcg
acttgtcattctgcgaaaggccttgaatggccggtggtcatgatcccttccgtcgaccaa
aatacttttccattttacagaagtgaggacactgcggaagagaggcgccttctatacgta
gcttgcactcgggcacagtcacttttatacgtcagtcgagcaacaacacggatggtggca
ggggagacaaaatcaaaagagctctcagagttcatttcgtctgttctgaacgataacggt
ttgaagaatgaaatggctttcttttctcaacaaattccgttttttacgcaagaggatcga
gctaccatcgccacagtcttacaaagaccccctccagaggaagctgaagtacaacgaaga
gtcgcaacctttgaacggagtgggcgagaacatcctatgcaaatatattggggaggaggc
catcatgtcgctccctcacgccccaagaatgcatactctattggcaatgcttcttatgta
tggtctgctggcggtggcggcatcaccaatgtaccgcagccaggttttattaggccagcc
attccgacgccccccgccacttcaaaatcaggttacgtttcactttcttctagcagtggt
ggtgaaaatcggattcttgggacatccagtgctccctttattcggctccaagacccgtcc
tcccgccccaccaaccgggcaagagaagtacaagtcgcttcgtcctccaaaacaactatg
tcagcaatgccattatgcatgccctcatccgatgacaacttgggcaattggaacgcttct
agccctttagccagggacgcaacacaacccccttgttttccatcttcactggatcacaat
ttttatgactcttcacctatgaggccctcttccttccattcagcttcgaggcagccccga
agagcaccgcaagcaattgaaatcatggatagcaataaacctgcattgcctcacacactt
tcacgaagggaacccaaaataccacaagttgcacctgcctcaccaaaaatatttgatgaa
gatcaaccaccaactctgagaacacccttggtggtttccacgccaatgacgcagtcttta
caacccactgcactagcgctacagaagacgggcgtgaagcaaccacaaattgcgccaata
tttgatgaaaatcaaccacctgacactatcgcgactccgatgccaatatcaagacctgcc
caaccgattgtaccatcagcgctaccgaagacgggcgtgaaacggcgattggggatggga
cgaattacgtcaggctactcgaacaagaaatttaagccgccagcgtga
DBGET
integrated database retrieval system
