Laccaria bicolor: LACBIDRAFT_297625
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Entry
LACBIDRAFT_297625 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
lbc
Laccaria bicolor
Pathway
lbc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
LACBIDRAFT_297625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbc03019
]
LACBIDRAFT_297625
03036 Chromosome and associated proteins [BR:
lbc03036
]
LACBIDRAFT_297625
Messenger RNA biogenesis [BR:
lbc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
LACBIDRAFT_297625
Chromosome and associated proteins [BR:
lbc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
LACBIDRAFT_297625
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Motif
Other DBs
NCBI-GeneID:
6077003
NCBI-ProteinID:
XP_001881279
JGI:
297625
UniProt:
B0DBM4
LinkDB
All DBs
AA seq
991 aa
AA seq
DB search
MARFRAYASDSSSDEEEPQRAGTSSASGRLPDEQERDEQHESESDEGSLSNPGESSGSSS
SSSDMDEDELIAPRTMKSVNSRGHNALVEDKDGEIRYAHEVDVRVSPPSTRSSPPSNPRQ
HVNGNPTIIPWAQQIGVDAQKMHVMQTSLFRMPEAAALRALNQPTRPQQTTRQNLVLPAQ
SLNRKHSRDSDGDGLRFDSRERASFAHDIEPPLYRPSRKYARVEINSSIANGKEGIYVDA
GLAMGRSFRVGWGPGGTLLHLGSICGPLSTSAISANSSVVTLTKILSPPPPIAGSSSALA
SKLLQHHLSHTPILPDDAGVPFAYPSPSPSSSSSSDPASSPEPPSSNPLSFDTFASLFPT
TDSSSPAALFRLGSALFDPLNLHLGRQPPGSDTTSGTAITPDLRNRITLLRRKTALSKWL
KDSVKQSVDRDLRAKAHGASSTIPYTPADTAFTHLTGHQVEQACNAAADGGYLKLSTLIS
QAGGDAVFKEDARSQVEIWKNEKLTPGIGELGGTHNGLVGKGVWKVYRLLGGLIDDEPDA
ARNGDDLCAGLDWKRVFGLYLWYGTDVDATIADIVRAYEPAAQTGVARPLPTWILEGKHP
KFTSSSVGTSRLDTTFSSASRAKEPDDPLFALIKLHADPALSLSHILDPLSFAPSGLDWG
IGMCWHLYVILSRVMRVRDFVDRGDPAVRKSRKRKTDKGLVNGWGSSGGESEEENEEDGD
VEGHSPTADLLASSYAFELESWGMIQEAVFVLLHIEGSVGREKAIKALLARSAPKFDEWM
TRGIVGSLKIPMAWVDEAKAMYALDQGDVFRAYELYTSAGLYNLAHDVAVLELAPEAVIR
RDLGLLKTLFVPFDKDGRRDKIDGWIVRGKVFLDYIHIMTRLPELYDQLAEESGRHGAVP
DASQQDEIEDLSRRVPRLIDILPNVLHGSRKMDDRHPAALEEMVNGLLGVVERANPLILS
QIQQLGTVDGAAKIGLVRGMGLTRFLRSVGA
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcttccgtgcttacgccagcgacagcagcagcgatgaggaagaaccccaacgc
gcaggaacaagcagcgcttcagggcgactaccggacgagcaggaacgcgacgagcagcat
gaatctgaatcagacgaaggaagcctcagcaacccgggagagtcgtcaggttccagttca
agttcttctgatatggatgaagatgagctaattgctcctcgaaccatgaaaagcgtcaat
tcaagagggcacaacgcgcttgtcgaggataaagacggcgaaattcgctatgcacatgaa
gttgatgtccgcgtctctccaccttctacaagatcatctcccccttccaacccgcgccaa
catgtcaatgggaaccccacaataataccatgggcacaacagattggggtggacgcgcaa
aagatgcatgtcatgcaaacatccttgtttcgcatgccagaggcagctgctctcagggcg
ctgaaccagccgacaagaccacaacaaacaactcgacaaaatttagttttacctgcacag
tcgttaaatcggaagcacagtcgcgactctgacggggatggactgcggtttgattctcgg
gagcgggcttcattcgctcacgacattgaaccacctctataccgtccatcacgaaaatac
gctcgcgtcgaaataaactcctccatcgcgaatggcaaagaaggcatttacgtcgatgca
ggtcttgctatgggtcgttctttccgcgtcggttgggggcctggcgggacacttctacat
ttaggcagcatctgcggtccattgtctacgtcagcaatatctgccaattcgtcggtagtc
acgctcaccaaaatcctttctcctcccccacctatcgcaggatcttcttcggctcttgca
tccaagcttcttcagcaccacttaagccataccccgatattaccagacgacgcaggggta
ccatttgcatatccgtctccctctccctcctcttcctcgtcatctgatccagcttcaagt
ccggaaccgccgtcttccaaccccttgagctttgacacatttgcttccctcttccctacg
acagattcctcaagtcctgctgccttgttccggctaggaagtgcattgtttgatcccttg
aatcttcaccttggtcgacaacctccagggtcggacacgacctctgggactgcaattacc
cccgacctcagaaatcgaattaccctgttgagaaggaagaccgctctcagtaaatggctc
aaagactctgtgaaacagagcgtagatcgagatctccgagccaaagctcatggggcttcc
agtaccatcccatacaccccagctgacactgctttcacccatcttacgggacatcaagtg
gaacaggcctgcaatgcagcggccgatggaggctacctcaaactctcgacccttatcagt
caagctgggggtgatgccgtcttcaaagaggatgctcggtcgcaggtggaaatctggaaa
aacgaaaagcttactccaggaataggtgaactgggcggcacacataatggactggtgggg
aaaggcgtttggaaggtttaccgccttttgggaggtcttatcgatgacgaaccagacgcg
gcacgtaatggagacgatctatgtgcaggtttggactggaagcgagtgtttgggctttat
ctatggtacggcaccgacgtggacgccaccatcgccgatatagtgagagcgtatgagccc
gctgctcagactggtgtggcgagacctctcccgacctggattctggaagggaagcatcca
aagttcacctcttcctctgttggcacttcgcggctggacaccaccttctcttctgcatcc
cgcgcaaaggaacctgacgaccccttgtttgctctaatcaaactacatgcggaccccgca
ctgtcactctcgcacattctcgacccgttatcgttcgctccttcgggattggattggggc
attggaatgtgttggcatctatacgtgatactctcccgtgtgatgcgagtacgggacttt
gtggacagaggagatccagcagtccgtaagtcccggaagcgcaagacagataaggggctt
gtcaatggttggggcagcagcgggggggagagcgaggaagaaaacgaagaggatggtgac
gtcgagggtcacagtcctactgccgatttgttggctagcagctacgcattcgagctggag
agctggggtatgatccaagaggcagtatttgtgctgcttcacatagagggcagtgttggg
cgggaaaaagccattaaagcccttttggcacgctcagctccaaaattcgatgaatggatg
accaggggaatcgtcggaagtttgaaaattccaatggcatgggtggacgaagccaaggct
atgtatgcgcttgaccaaggcgatgttttccgtgcctatgagctctacacctctgcaggg
ctttacaatctcgcgcacgatgttgctgttcttgaactcgctccagaggccgtgataagg
cgagatttgggcttactcaaaacgttgttcgtaccattcgacaaggatggcaggcgagat
aaaatcgatggttggattgttcgtggcaaggtgttcctggactacatccacattatgacc
cgacttcccgagctttatgatcagcttgcagaggaaagcgggagacacggtgcagtccct
gatgcttcgcagcaggatgaaattgaggacttgtcgcggcgggtaccaaggctaattgac
atcctccccaatgtgctccacgggagccggaaaatggacgacagacacccggctgcgttg
gaagaaatggtgaacgggctgcttggcgtggtagagagggcaaacccgctcatcctctct
caaatccagcaactgggcacggtggatggagctgccaagataggacttgttcgcgggatg
ggacttactcgctttctgcggagtgttggggcctaa
DBGET
integrated database retrieval system