Laccaria bicolor: LACBIDRAFT_297730
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Entry
LACBIDRAFT_297730 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K08737
DNA mismatch repair protein MSH6
Organism
lbc
Laccaria bicolor
Pathway
lbc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LACBIDRAFT_297730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbc03400
]
LACBIDRAFT_297730
DNA repair and recombination proteins [BR:
lbc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
LACBIDRAFT_297730
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
AAA_29
ABC_tran
Motif
Other DBs
NCBI-GeneID:
6076854
NCBI-ProteinID:
XP_001881323
JGI:
297730
UniProt:
B0DAQ6
LinkDB
All DBs
AA seq
1291 aa
AA seq
DB search
MFACVDYRPNKYQCVLSRFCIGSVRISTTQHRVGMAPQPKASSESLKQKSLKSFFSKGPA
KEAAKSTHNSPKTNAIGKAAPSNSVPTASKRKDIPSSSPEPKTPDSKYPNARYLSSPPAA
SPASSLGMTTPPTSDAIDVDMYSQEEEEPRSIKSTHGKRKVVIEDSDEEASKQRKSSHRN
SSPLNAIQNKHAKKPRISMVLSDDEDEDREISTSVTSFTQRFTRYKKSPKKKARSKASET
EDDDFIAPSDSDVEVKSTKSFSSRSSASSHRSRASSEEESEDDKPKKSKSKSTRALKQTS
AKEKATRVAESASGGSSMFLTKAEQREIGKKEEKKAAESPYSFLADIKDKDGRRPGEPNY
DPRTIFIPKSAWKDFTPFETQFWEIKQNHYDTILFFQKGKFFELYEDDARVGHQVFDLKL
TSRVKMSMVGVPEMSFNFWAAKFLGKGYKVGRVEQAETALGAEMRMAATKGKASEDKSKD
KIVRRELNKVYTNGTLVDPELLTDEQAGHCISICEEGSEPSNNKFGICVLECSTSQFNLS
SFEDDVCRTKLETLLRQIRPKELVYKKGTLSVATQRLLKSILPPACLWTGLRSVEGFNYE
ATLQEIKALFPPEEDDNMDDTDESLLPSSVPDCIREMGGDQSAIEALGSMIWYLRQLNID
KDILSMKNFNVYDPMKRGRGLTLDGQTLAHIEILLNNEGTEDGSLLTLLRRCITPFGKRL
FRIWLCMPLSDISAINARKVVQDILKHPTFEASFTGVAKGLPDLERIVSRIHAKNCRIKD
FLKVLSAFKTMNKGFSKLADESEDFDSKTILGLLRNAPDLLPNIKNVQSMYEPTEEKEAD
ELVPQKGKDARYDEIVAEIEELEEGLEDHLKKFQKSLGIKLEYWHSHVGNKEIYLMETPA
SVKKEKVPKDWSKSGGTKAKTRYVVGSLQKTVRQLKEARENRNTAIKAFKFRLFEEFDTD
RVLWLRAIRVFAELDCLFSLAKSSAAIGEPSCRPEFVEGDAAFVDFEQLRHPTLCLSTNL
KSFIPNDVKLGGDEGKIALLTGPNMAGKSTVMRMTAVGVIMAQLGMLVPAARAKLCPVDS
IITRMGAYDNMFSNASTFKVELDECCKILRDATPKSLVILDELGRGTSTFDGMAIAAAVL
HQLATHTLPLSFFATHYSSLTDDFAYHPNIRNMHMSTIVDEEKRDLVFMFKLVEGVAESS
FGTHVANLAGVPLPVVERADVISKTFAQQFKEKLQTKKKHDASSRLPLVAQADFTYLFKL
ATGQLELPENPVRRQEILNRLKETVQRYLHH
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcttgtgttgattatcgaccaaacaagtaccaatgtgtcctgtcacggttctgt
attggttctgtaaggatttcgaccactcaacatcgtgttgggatggcaccccaacctaaa
gcgtcttctgaatccctaaaacagaagagtctcaagtcattcttctctaaaggtcctgcc
aaagaggccgccaaatctactcacaattcaccaaagactaacgcgatagggaaagcagct
ccctccaactccgtaccaaccgcgtcaaaacgcaaggatataccctcttcttctccggag
ccaaaaacccccgactctaaatatcctaatgcgcggtatttgagctcgccgcctgctgct
agccccgcatcctctcttgggatgaccaccccgccgacgagcgatgcgatagacgtagat
atgtactcacaagaggaggaagagcctcgttcgattaagtcgactcacgggaagcgtaaa
gtggtaattgaagattcagatgaagaagcctccaaacagcgcaaatcttctcatcgtaac
tcctcgcctttaaatgccattcagaacaagcacgccaagaaaccacgcatatccatggta
ctcagtgacgatgaagacgaggacagagaaatatcgacctcggtcacatccttcacccaa
cggttcactcgttacaaaaaatcacccaagaagaaagcgcgttcaaaggcatcagagaca
gaggatgacgacttcattgctccctcggactccgacgtcgaggttaaatcaaccaaatct
ttttcttctcgctcctctgcgtcttctcatcgttcacgcgcctcgtctgaggaggaatcg
gaggacgacaagcctaaaaagagcaaatcaaagtcgactcgcgcgcttaaacagacctca
gcaaaggaaaaagctaccagggtcgcagagtcagcatctgggggctcctccatgttcttg
accaaggcggagcaacgtgagattgggaagaaagaagaaaagaaggccgctgagtctcct
tactccttcttagctgatatcaaggataaagatggcaggaggccgggagagcccaactat
gaccctcgaaccatttttataccaaagagcgcttggaaggatttcactccattcgagaca
cagttctgggagatcaagcaaaaccattacgatactattttattcttccaaaagggtaaa
ttctttgagctttatgaagacgatgctcgtgttggacatcaggtgtttgacctgaagttg
acatcgagagtcaaaatgtcaatggttggtgtcccagaaatgtccttcaacttttgggca
gcgaaattcttgggcaaaggttacaaggttgggcgcgtcgaacaagccgaaactgccctt
ggcgcagaaatgcggatggctgcgactaaaggaaaggcaagcgaagataaaagcaaagat
aagattgtacgacgagaactcaataaagtgtatacgaacggcacactcgtcgatcccgag
ctcttgacggacgagcaagctggacactgcatttctatttgcgaagaaggctcggagcct
tctaataacaagtttggaatatgcgtcctcgagtgctccacatcccagttcaatctgagc
agttttgaggacgatgtttgtcgtaccaagttggaaacgctgttacggcagatccgaccg
aaggaactcgtgtacaaaaagggaactttgtccgtggcgactcagcgattgctcaaatcg
atccttccccctgcgtgtttgtggacgggtctgcgtagcgtagagggattcaactatgag
gcgacactgcaggagattaaagcactttttccccctgaagaagatgacaatatggacgat
actgatgaatctctattaccgtcctctgttcccgactgcattcgagaaatgggtggcgat
caaagcgcaatcgaagctttggggtcaatgatctggtatctccgtcaactgaatattgat
aaggatatcctgagtatgaagaatttcaatgtgtacgatccaatgaaaaggggtcgggga
ctcactctcgatggacagactttggcacacatcgagatactccttaataatgaaggaaca
gaagatgggtctcttctgacgttattgaggcgctgtatcaccccgttcggcaaacgactc
ttcagaatctggttgtgtatgcctctttccgatatctcggcgataaatgcgaggaaagtt
gttcaggacatcctgaagcatccaacctttgaggcgtccttcactggtgtagctaaagga
ttgccggatttggagcgtatcgtctcccgcattcatgctaagaactgccgtataaaagac
ttcttgaaggtcttgtccgcattcaaaactatgaataagggcttcagcaaactggcagat
gagtcggaagacttcgattccaagaccattcttggtttgcttcggaatgcgcctgattta
ttgccaaacataaaaaatgtccagagcatgtacgaaccaacggaggagaaagaggcggat
gagctggtaccccaaaaagggaaggatgcaagatatgatgagattgtagcggagattgaa
gagcttgaagaaggcctcgaagatcatctgaagaagtttcagaaatctctcgggataaag
ctggaatactggcatagccatgttgggaacaaggaaatctatttaatggagacccccgca
agtgtgaagaaagagaaggtcccgaaggactggagtaaaagtggtggtaccaaggcgaaa
actcgatacgtagttggctccttgcaaaagactgttcgccaactgaaagaggctcgggag
aaccgcaacaccgctatcaaggccttcaagttccggctcttcgaggaattcgacacggat
cgagttctgtggttgcgtgccatcagggtctttgcagaactggattgcttgttcagcttg
gccaagtcgtccgctgctatcggagagccttcttgccgacctgaatttgtagagggtgat
gccgcttttgtcgactttgaacaactgcggcatcccacattgtgcttgagcacgaatttg
aagagcttcattccgaatgacgtgaaattgggaggtgatgagggaaagatcgcgctgctt
acaggtccgaatatggctggaaaatccacagttatgcgcatgacggccgtaggcgtcatc
atggcgcaactcggcatgcttgtccccgctgctcgcgctaaattgtgccccgtcgactcc
atcatcacaagaatgggagcctatgacaatatgttctcaaatgcaagtacattcaaagtc
gaacttgatgagtgttgtaaaatcttgcgtgacgctacacctaaatccctggtcattctt
gatgaacttggaagaggaacttcaacatttgacggaatggcgattgctgctgcggttctt
caccaacttgcaactcacacattacccctgtcattcttcgcaacacattatagctcattg
acggacgattttgcatatcaccctaacatcagaaatatgcacatgtctacaatcgtggac
gaggaaaagagagatctcgtctttatgttcaagctcgtggaaggcgttgcggaatcttca
ttcggcacccatgtggctaaccttgctggagtacccctccccgttgttgaacgcgccgac
gtcatctccaaaactttcgctcaacaattcaaggagaagttgcaaactaaaaagaaacat
gatgcttcatccagactacctctcgtcgcacaggctgatttcacgtacctgtttaaattg
gcaacaggacagcttgagctgcccgagaatcccgtaagaaggcaagagattctgaaccgc
ctgaaagagacggttcaacgctaccttcatcactaa
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