KEGG   Laccaria bicolor: LACBIDRAFT_297749
Entry
LACBIDRAFT_297749 CDS       T01044                                 
Name
(RefSeq) hypothetical protein
  KO
K12881  THO complex subunit 4
Organism
lbc  Laccaria bicolor
Pathway
lbc03013  Nucleocytoplasmic transport
lbc03015  mRNA surveillance pathway
lbc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lbc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    LACBIDRAFT_297749
  09122 Translation
   03013 Nucleocytoplasmic transport
    LACBIDRAFT_297749
   03015 mRNA surveillance pathway
    LACBIDRAFT_297749
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lbc03019]
    LACBIDRAFT_297749
   03041 Spliceosome [BR:lbc03041]
    LACBIDRAFT_297749
Messenger RNA biogenesis [BR:lbc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     LACBIDRAFT_297749
    TREX complex
     LACBIDRAFT_297749
Spliceosome [BR:lbc03041]
 Complex C
  Other components
   EJC/TREX
    LACBIDRAFT_297749
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    LACBIDRAFT_297749
SSDB
Motif
Pfam: RRM_1 FoP_duplication
Other DBs
NCBI-GeneID: 6076735
NCBI-ProteinID: XP_001881333
JGI: 297749
UniProt: B0DAS5
LinkDB
AA seq 255 aa
MQTIPQNRLSQPYARSNNFHGPKRQLLGNQAGHAPPSWRTNGPVPVPQGGKGRGAPADSG
SKIFLSRLPVDVAEKDVEELFRKTVGPLKESFLIYNSQGRSKGMAVVTFQRPGDAALARE
KYDGKIVDGRRNIKIEVIVDGVPHNMGAPRGPPPLPTLLTRLGGAPAAASTLLVATPMAG
PSTVTPRAGPVSRLPQHSMKARIAPVVAAAVPPRRIRQKKGPKRLKKRAPMTVDDLDKDM
EDYRASAPDVGMGIA
NT seq 768 nt   +upstreamnt  +downstreamnt
atgcaaacaataccacagaacagactctctcagccatatgcgcgttccaacaacttccac
ggacccaagcgacaactcttaggaaaccaagcaggccacgcgcctccctcatggcgaaca
aacgggcccgtgcctgtgccacagggtggaaagggcagaggggctccagcagatagtggg
agcaagatatttttgagcaggctgcccgttgacgtcgctgagaaagatgtggaagaactg
ttcaggaagacagttgggccattgaaagagtcgttcttgatctacaactcgcaggggcga
tcaaagggcatggcagtagttacgtttcagcgccctggcgatgcagctcttgctagggaa
aagtatgacgggaagattgtcgatggacgacggaacatcaagattgaagtcatcgtcgac
ggggtgccacataatatgggcgctccgcgaggtcccccgcccctaccgactctactgact
agactgggtggggcgccagcagcggcgtcaacattattggtagccactcctatggctggt
ccaagcacggtcacacctcgagccggcccagtttccaggttaccccaacactctatgaaa
gcacgcatagctcccgtcgtagccgctgccgttcctccacgtcgaatccggcagaagaag
ggccccaagcgattgaagaagagggccccgatgacggtcgatgacctcgataaagatatg
gaagactatcgtgcttctgcgccggatgttggtatgggtattgcttga

DBGET integrated database retrieval system