Laccaria bicolor: LACBIDRAFT_300423
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Entry
LACBIDRAFT_300423 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
lbc
Laccaria bicolor
Pathway
lbc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LACBIDRAFT_300423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lbc03009
]
LACBIDRAFT_300423
Ribosome biogenesis [BR:
lbc03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
LACBIDRAFT_300423
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nrap_D4
Nrap_D3
Nrap
Nrap_D5
Nrap_D2
Nrap_D6
Motif
Other DBs
NCBI-GeneID:
6078696
NCBI-ProteinID:
XP_001883057
JGI:
300423
UniProt:
B0DGR0
LinkDB
All DBs
AA seq
1224 aa
AA seq
DB search
MTQNLKRKRENQLASRKTRKVEEEPDDETALDVEEHGGNSGAEDGLSDYGDMIEDDAEAE
WGGVTGGQADVGEEHRPGTKPKKPPTGEELRAIKDAADLFRSGSFKLQIDALLPNIRPKA
SRIPPLDRILLSLHTFLMGIPSVSPQHPLEAARKLLKKGVAVPYSLPLPTEDTNWKVAFD
SPSDITLAGSWANKVSVKLKDGLKFGVDLAVEMPNSLFQEKDYLNGRFFHKRSFYLATIA
AAIQNPKSGFNVEVYYESLLEDVRLTKLVLIPKSDGPHTDFTKLNAQVNIIPVLSPSSPI
PLHRLSPSHSNIRISANEDAKPPTPLYNNALLRSFTPKSHLLTTYSLKEESPAFADALTL
LRIWANQRGFSEGSRFCVRGFEGSGPFWVGLLALLMKGEEPRASDSKYTKRRPLGKGLSS
YQLFKAALDCLAKHPFGKSPLFVKAKDGHRFPPEEYEGHEAVLVDSGSFVNLLSGVPLGS
VKLLQYEASKTLEILNETTITGDPFTEVFLKDNRDLSTRFDVVLRVDLSSAKPRSSSIQT
TLDSGSTSTALMSSLGSLVSRGLGDRVQAAAILHPSPAARSVSQAHPLVPDVIVIGLVLD
PQNAFRLVDHGPAADDEDQVALNDFRELWGGKSELRRFKDGRIIESVVWEVKTADERAHV
PAMIVQHILKRHFGLEEDAVQSWQSSFDSVLRLPESISSKYLASGVSTGFKGAMTAFDNL
VKAIKALDDELPLTLSTVSPTSELLRYTSVFSPVPLPASLATSMPPYTRYLTPIDIVLEF
EKSSKWPDDLRAIQKIKLAFFERLASVLMESVSGLKANVVIGAGMQESDIIDKAYLEIVT
SEGWAFSARIWHDREATLLDRIIDDKQKVMPHIATTKEVKKGKDYSEGLLAKELYIRRFI
HAPHHHRAIAALCHRFTAFSGTVRLVKRWLASHWLLQGHITEEAVEIICAHFFVGDGRKL
AIDADAEQAASHLVPSSKERGFATVVQFLAEWKWEDGLFVHLYGPKSPESSKPTAKGPTE
GVWSISTEVDSDGRMWTSHGPDMVVAFRVRALAKATWDYLQGLEQGQLNVQSMFIHPTDD
YDFIVQLDPMALARYHHNVAADHSFLSKQGKYANQQQWEVNADVLPGFDPARFLFSDLQR
IYADTFKIFFDPYGGDRFGGVWDPTLRQPRPFRVLGGFSSIPFAKESDKAKEKGLVTLNE
EAILGEIERLGTGLIKRITVQSKS
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagaatctcaagagaaagagggaaaaccaattggcgtctcgaaagacgcggaaa
gtcgaggaggagcccgacgatgaaactgccttagacgtcgaagaacatggcgggaactcg
ggcgcagaagatgggctttcagattacggggacatgatagaagacgatgccgaggcagag
tggggaggggttacgggaggccaggcggacgttggggaggagcatcgcccaggtaccaaa
ccaaagaaaccaccaactggcgaggagttacgagcgataaaagacgcagcggatttgttt
aggtccggctctttcaaactgcagatcgacgcattattgcccaatattcgccccaaagcg
tccagaatacccccgctggatcgcatccttctctctcttcacacattcttaatgggaata
ccctcggtctcgccccagcatccccttgaagcagcacgaaagcttttaaagaaaggtgtt
gcagtgccttactcgctacctctgcccacagaggacacaaactggaaggtcgcgttcgac
agcccaagcgatatcacactagctgggagttgggcgaataaagtcagcgttaaactaaag
gatggattgaagtttggtgtcgaccttgcggtggagatgccgaacagtcttttccaagaa
aaggactatcttaatgggcgattcttccacaagcgatcattctatctcgcaacaattgcc
gcagcgatccagaaccccaagtcaggcttcaatgtggaggtttactatgaatctttgctt
gaggatgtacgtctgacgaagttggtcctcattccaaaatccgacggtccccatactgat
ttcacaaagctcaatgctcaagtaaacatcatccccgttctatcgccctcatctccaatt
cccctccaccggctatccccctcgcactcaaatatccgcataagcgcaaacgaagatgcc
aagccaccaacacccctgtacaacaacgcccttctccgctcatttacaccaaaatcgcat
ctgctgaccacttactcgttgaaggaggaaagcccggctttcgcagacgcgttaacgttg
cttcgaatatgggccaaccaacgcggtttcagcgagggttcaaggttctgtgttcgaggg
ttcgagggttctggccctttctgggtgggcctcttagcgttgcttatgaaaggggaagaa
ccgcgcgcttcagactcaaaatacacgaagagaagaccgttggggaagggtttaagttcc
taccagttgttcaaggctgcgttggactgcctagccaaacatcccttcggcaaatcacct
ctcttcgtaaaggccaaagatgggcatcggttcccaccagaggagtacgaaggccatgaa
gctgtgctggtcgactcgggctcattcgttaacttgctttctggagtaccgctgggctcc
gtcaaactgcttcaatacgaagcatccaaaactctggagatcttgaatgagacgacgata
acgggagatcctttcacagaagttttcctcaaggacaatcgcgatttgtcaaccagattt
gatgttgttcttcgcgtcgatctttcgtctgctaagcctcgctcttcgtctatccaaact
acgctcgactcgggatcgacttctacggctctgatgtcatcacttggctctttggtcagt
cgaggtctcggagatcgcgtccaagctgccgcaatccttcacccttcccctgcagcgcga
tcagtatctcaagcccaccccttggtacccgatgttatcgtcatcggtcttgtccttgat
cctcaaaacgcattccgcctcgttgatcacggtcctgcagctgacgacgaagaccaggtt
gccctcaacgacttccgggagctctggggaggcaagtccgagcttcgtcgattcaaggac
gggaggataattgaaagtgttgtttgggaggtcaaaacagccgacgaacgcgctcacgtc
ccagcaatgattgttcaacacattcttaagcgccattttggcctcgaggaagacgcggtt
caaagctggcagtcctcttttgactcagttctccgactccccgaatccatttcaagcaag
taccttgcttcgggtgtttcaaccggtttcaaaggcgctatgacggcgtttgacaacttg
gtgaaggcgatcaaggccttggatgacgagctcccattaaccctctccactgtcagcccc
acgtcagaacttttgcggtataccagcgttttcagtcctgtccccctaccagcatccttg
gcaacgtcaatgccaccctatactcgctatctcactcccatcgatatcgttctcgaattc
gagaagtcatccaagtggcctgacgacctccgagcaattcaaaagatcaagcttgcgttc
ttcgagcggctcgcgtcggtcctgatggaatccgtgtctggcctgaaggcgaacgtagtg
attggtgctggcatgcaggagtccgatattatcgataaagcgtacctggagatcgttact
tcggaaggctgggccttttctgcgcggatatggcacgaccgggaagcaacgcttctcgat
cgcatcatcgatgacaagcaaaaagtcatgccgcatatcgcgacgacgaaagaggtgaag
aaggggaaagactattctgagggtcttctggccaaggagctgtacatcagacgcttcatt
cacgctccccaccatcatcgagccattgcagctctttgccataggtttacagcgttctcc
ggtaccgttcgtcttgtcaagagatggctcgcatcgcactggctgctacaaggccacatc
accgaggaagctgttgagatcatctgtgcacacttcttcgtcggggacggacgcaagctc
gcgatcgatgctgacgctgagcaagctgcgtcgcatctggtcccgagtagtaaagaacgt
ggctttgcaactgttgtccagttcctagctgagtggaaatgggaagatggcttgttcgtt
catttgtacgggcccaagtcgccggaatcatccaagcccacagctaaaggcccaactgag
ggtgtgtggtcgatatcaacggaggttgacagcgatgggcggatgtggacgtcccatggg
cccgacatggtggttgctttccgagtccgagctttggcgaaggcaacctgggactacttg
caagggttggaacagggtcaattgaatgtccagtcaatgttcattcaccctacagatgat
tatgatttcatcgtccagttagatcccatggcgctggcacggtatcaccacaacgtcgct
gccgatcatagcttcctcagtaaacaagggaaatacgctaatcagcagcaatgggaagtc
aacgccgacgtcttgcccggctttgacccagctcggttcctgttctcagacctgcagcga
atctatgcggacactttcaaaatattctttgacccatacggcggtgatcgattcggaggc
gtctgggaccctaccttgaggcaacccagaccgtttagagttctcggcgggttttcaagc
attccatttgcaaaggaaagcgataaagcgaaggagaaaggtttggttacgctaaacgag
gaagcaattcttggtgagatcgagagactggggacgggtctcatcaaacgcatcacagtc
cagtcgaaaagctga
DBGET
integrated database retrieval system