Laccaria bicolor: LACBIDRAFT_300974
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Entry
LACBIDRAFT_300974 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
lbc
Laccaria bicolor
Pathway
lbc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
LACBIDRAFT_300974
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lbc03041
]
LACBIDRAFT_300974
03110 Chaperones and folding catalysts [BR:
lbc03110
]
LACBIDRAFT_300974
04121 Ubiquitin system [BR:
lbc04121
]
LACBIDRAFT_300974
Enzymes [BR:
lbc01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
LACBIDRAFT_300974
Spliceosome [BR:
lbc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
LACBIDRAFT_300974
Complex C
U4/U6.U5 tri-SnRNP related factors
LACBIDRAFT_300974
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
LACBIDRAFT_300974
Chaperones and folding catalysts [BR:
lbc03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
LACBIDRAFT_300974
Ubiquitin system [BR:
lbc04121
]
Ubiquitin ligases (E3)
U-box type E3
LACBIDRAFT_300974
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pro_isomerase
zf-NOSIP
U-box
Vma22_CCDC115
Motif
Other DBs
NCBI-GeneID:
6069962
NCBI-ProteinID:
XP_001873328
JGI:
300974
UniProt:
B0CR11
LinkDB
All DBs
AA seq
521 aa
AA seq
DB search
MGHGNSDKLYITHAEHAGLFGSHSSSRGFKSKVQGGPVSITPFDCCALSFQPFTHPVCAR
NSDGTGFVFDLVNIIPWLKQHNNTNPITKQPLTPSDLITLNYSRKEATGEIHDPISFKPF
NEHSHIVAIATTGNVFLAESIQGGKDLVNDVAFKKEDVITLQNLHGLPPASVPSVTTSKL
PQSVNKSEIAKPSSSAVSAVKAKASVPWNVSPYSSGMPGASLTSTSVDPQLNSSQLLWDE
EELMFEDISKPLKGKGKEKDVGKRRAYVRVVTSLGGASLNLELFCEKAPKTCYNFLMLAR
AGKYNNCLFHRLVPGFMIQTGDPTGTGSGGESYWGTPFRDEYDVKGATLHDGRGVLAMAN
KGANTNSSQFYFTFKATPHLDKKHTVFGKLVGGEDVLDALEKLPVKPGSDRPAKTVRISE
VVIYQDPFEEYKKRLANKLAKRAEAEKATDGQAGTKEKPKDDINWFGVKVGSVNPTPSSE
KTGGASVGKYLLKRSQDATEGSVTGEPKKKRKVGFGDFAGW
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgggacacggtaattcggacaaactttacatcacccacgcggagcacgcaggtctcttt
ggatctcactcgtcgtcgagaggattcaagtcaaaagtgcaaggtggccccgtctcgata
accccctttgactgctgtgctctctctttccaaccttttacgcatcctgtttgcgcgaga
aattcagacggaacgggatttgtctttgacctggtcaacattataccctggctcaaacaa
cacaacaacacaaatccaataaccaaacagcctctcaccccctccgacctgattaccctg
aattattctcgaaaagaggccacaggcgaaatacatgacccaatctcattcaagcccttc
aacgaacactcacatatcgtcgcgatcgcaacaaccggaaatgtgtttttagcagaaagc
attcaaggtgggaaggatttggtaaacgatgtggcgttcaaaaaagaagatgttatcact
ttgcaaaatctgcatggacttcccccagcctcagttccctctgtaaccacttctaagctt
cctcaaagcgtgaacaagtcagaaattgcaaagccgtcgtcatcagctgtgtcagctgtc
aaagccaaggccagcgttccatggaatgtctctccctactcgagtggcatgccaggtgct
tccttgacatcgacttctgtcgatccacaactcaacagctctcaattgctgtgggatgaa
gaagagctcatgtttgaggatatttccaaaccactgaagggaaaaggaaaagaaaaagat
gttggcaaacgtcgagcgtatgttcgagttgtcacaagcctcggtggtgcgagtttgaac
ctagagctcttctgcgaaaaggctcccaaaacgtgctacaactttctaatgttggcaagg
gccggaaaatacaataattgcttattccatcgacttgtccctggcttcatgattcaaact
ggggatccgacggggactggatcaggcggcgaatcatattggggtactccctttcgagat
gagtatgatgtgaaaggagccacgttgcatgatggccgaggagttcttgcgatggccaac
aagggcgcaaatacaaatagctcccagttttatttcacattcaaagccactccacatttg
gacaagaagcacactgtgtttggtaaactcgttgggggtgaagacgttctcgacgcactt
gagaagcttccggtcaaacctggttcagacagaccggcgaagactgtccgaataagtgaa
gtggtgatttaccaggaccccttcgaagagtacaaaaaaagattggcaaataagctggcc
aaacgagctgaggctgagaaggctaccgatggccaggctggtacaaaagaaaaaccaaaa
gatgacatcaattggtttggtgtgaaagttgggtcagtaaatccgacacccagttcggag
aaaactgggggtgccagtgtagggaagtatctgttaaagcgttcccaagatgcgacggaa
ggttctgtcacgggcgagcccaaaaagaagcgcaaggttggctttggagactttgcaggt
tggtag
DBGET
integrated database retrieval system
