Laccaria bicolor: LACBIDRAFT_301133
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Entry
LACBIDRAFT_301133 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
lbc
Laccaria bicolor
Pathway
lbc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LACBIDRAFT_301133
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lbc03009
]
LACBIDRAFT_301133
Ribosome biogenesis [BR:
lbc03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
LACBIDRAFT_301133
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR75_1st
Beta-prop_WDR75_2nd
WD40_WDHD1_1st
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
WDR55
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_WDR35_TULP_N
NBCH_WD40
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
6069506
NCBI-ProteinID:
XP_001873397
JGI:
301133
UniProt:
B0CRE8
LinkDB
All DBs
AA seq
963 aa
AA seq
DB search
MAPSIEPYPQPQPLPSKTKQRPTRDSGDIRLKKAKGKQNASPPIPPTDPSPPTPWEWASL
SDPSSSKTPPIFTNDGRSASYFFSLVGSQVKIHSVATGQVVSILTSSPPSTTETSPDSLT
SAIINPHNAFQLITGSLDGRAMIWDFINATLLQTIDIGQPIHYICAHKEFKDTIFVAASR
PTKKDNNAVILRVSLKPTENATEILPIGKIRSPAGLAISPNGAWIVAAAGHKVYVARTSD
LASGFTKYVSPERLTCLAFHPSDEYFATGDEKGVVRLWYCLNNDLAINSRGVEKRTQTTS
LHWHAHAVSSVTFTPNGAYLLSGGEEAVLVIWQVHTGKKEFIPRLGAPINAVSVSNRGTA
EEYLVRLADSTHSFISSSSLRITRSYSQIRVDPSICYPPSAPISVPLAVHSSSSTLILPT
SHPSSIQIYSPLSSTSTSELEVSPSNRVSRRDEKPLEPSRVESVVVSSSGLWMSTIDSRQ
GDANFGTEVFLKFWIWDQKTRRWLLNTRIDRPHGQKKVNDLSFSPDKGKKQPITLLSTGE
DGCIKFWVLRSRKSGSASQEDFWIARASFSFRSAMPHCASWSPDASLVAVSLGPHVAIYD
PITATLCQTLIAPECQDSKLVDFIGNAGRYLAVAGLSSIVLWDLVSKTVCWHFDSPLGVC
RIVSHPTEDKFVVFHETPLDDEGQRTTISVFHVSSRVPQRTCTVPFGLRNVTWYCASPTT
TNFSFVGISYNWSVVVFGDKSLLRKGETTTLKELIGFSTVQGRTLFQDVFGKSAFLDAFT
RTSQAPRISSEVHTESVDKADMIFEYPAYLMPSLDHLFDPLLESFLKTSVQRANLSQEVA
AGEQEEDDVDMEDPMSASITVESVGRCLNQVKLDVVTDLFRRHSICGSAGAVHPTVTGQL
NDIAQCRVKDIQPLSLPKSFLFKNGTRKVALLLSNSTSPSPASSVPVSSSTVTTGKKRKK
SLG
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atggctccgtccattgaaccgtacccacaacctcagcccctaccctcaaaaacaaagcaa
agacccaccagggactcaggggatattaggttaaaaaaagcgaaaggaaaacagaatgcc
tcaccgcccataccaccaacggatccatccccgcccaccccatgggagtgggcatctctg
tcagatccttcgtccagcaaaactcccccaatatttaccaacgatggaaggtctgccagt
tattttttctctcttgtgggctctcaggtcaaaatacattccgtagcgactgggcaggtc
gtctctatcttaacctcttccccaccttccaccaccgaaacatcaccggattcgctgaca
tctgccattatcaatcctcacaacgcgttccaattgatcacgggctcactcgacggaagg
gcgatgatttgggatttcatcaatgccactcttcttcaaactattgatattgggcagcca
atacattatatttgtgcgcacaaagagtttaaggatacgatttttgttgcagcgtctcgc
cctacaaagaaagataacaacgccgttatattgcgcgtctctctaaaacctactgaaaat
gcgaccgaaattttgcccattggaaaaattcgttctcctgctggacttgctatctcgccc
aatggcgcatggatcgtcgcggctgctggacacaaagtctatgtcgcaagaacatcagat
ttggcttctgggtttactaaatacgtatcaccagaacgcctcacctgcttggcattccat
ccttctgatgaatatttcgcaacgggcgacgaaaagggtgtggtcaggttgtggtattgt
ctcaacaacgacttggctatcaattctcgcggagtagagaagcggacacagaccacctcg
ttgcattggcatgctcatgcggtgtcttccgttacttttacgccgaatggagcctacttg
ttaagcggcggtgaggaggccgtcttggtgatatggcaggtgcacaccggaaaaaaggaa
tttattccacgtttgggagcgccaataaatgctgtatctgtctctaatcgagggaccgcc
gaagaatatttggtcagacttgcagactctacacactctttcattagttcgagcagtctg
aggattacaagaagctactcgcagatcagagttgatccctcaatatgttatccgccctca
gcgccgatttccgtccctctggctgtgcattcatcgtcgtcaacccttattcttcccact
tcacatccatcttcaatccaaatatactccccactttcctccacatcaacgtcggagtta
gaggtatcgccttcaaaccgtgtttcaagacgagatgagaaaccattggagccttctcgg
gtcgaaagcgtggtcgtgtcatcatctggattatggatgtcgacgatagattctcgacaa
ggcgatgcaaattttggtaccgaagtctttctgaaattttggatttgggaccagaagacg
cgacgctggcttttgaacaccaggatagacaggccgcatggtcaaaaaaaagtaaacgac
ctcagttttagtcctgataaaggcaagaaacaaccgattactctcctctcaactggcgaa
gacggttgcataaaattttgggtattgcggagtcgcaaaagtgggtcggcctcccaagaa
gacttttggattgctcgcgcttcttttagtttccgctctgcgatgcctcactgtgcatcg
tggtcccccgatgcttctcttgtcgctgtatctttaggcccccacgtcgctatctatgat
cccattactgccactctctgccagacattgatcgctccagagtgtcaagactcgaagttg
gttgactttataggcaacgcaggtcggtatctggctgtcgccgggttaagcagtatcgta
ctttgggatcttgtctcgaaaactgtttgctggcattttgacagccccttgggtgtgtgc
cgtatcgtctcccaccccactgaagacaaattcgtcgtctttcatgaaacgcctctggac
gacgaaggccaaagaaccaccatctccgtattccacgtttcttcccgcgttccccaaagg
acttgcactgttccttttggccttcggaatgtaacgtggtattgtgcgtctcccactact
actaacttcagtttcgtcggcatctcatataactggagtgttgtcgtatttggagataaa
agtttattacgaaagggagaaacgacgactttaaaagagcttattggtttttctactgtt
caaggacgaacactctttcaggacgtctttgggaagtctgcattccttgatgccttcacc
agaacatcccaagcaccaagaatttcctccgaggttcatacagaatctgttgacaaagca
gacatgatttttgaatatcctgcctatctcatgccatctcttgatcaccttttcgaccca
ctgttagagtctttcctgaaaacttcagtccaacgggcaaatctttctcaagaagttgca
gctggagaacaggaggaagatgatgtagatatggaagacccgatgagtgcatcgataacc
gttgaatcggttggacggtgtctaaatcaagtgaaactggatgttgtgacggatcttttc
agaagacattctatctgtggttccgcgggagctgtccatccaacagttaccggtcaactg
aacgacattgcacaatgtcgcgttaaagatatccagcctctatcccttccgaaatctttt
ctgttcaagaatgggacgcgcaaagttgccttgcttttgtcgaactccacatccccgtca
cctgcctcctctgtccctgtctcgtcatccacggtcacaactggcaaaaagcgcaaaaag
tctttagggtga
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integrated database retrieval system