Laccaria bicolor: LACBIDRAFT_301173
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Entry
LACBIDRAFT_301173 CDS
T01044
Name
(RefSeq) WD40 containing SNARE-dependent exocytosis protein
KO
K08518
syntaxin-binding protein 5
Organism
lbc
Laccaria bicolor
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lbc04131
]
LACBIDRAFT_301173
Membrane trafficking [BR:
lbc04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
LACBIDRAFT_301173
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
LACBIDRAFT_301173
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lgl_C
ANAPC4_WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_IFT140_1st
WD40_WDHD1_1st
WD40
Nucleoporin_N
TFIIIC_delta
Beta-prop_WDR75_1st
PNKP_ligase
Motif
Other DBs
NCBI-GeneID:
6068821
NCBI-ProteinID:
XP_001874033
JGI:
301173
UniProt:
B0CRI3
LinkDB
All DBs
AA seq
1100 aa
AA seq
DB search
MFSKQHEHVSFIPDLSPELRDEGDWMIGRLRTFEFLIDVSSFAIEPTSGLLAVGTSSGSI
YLYGGAGVECKITLPQDFAVRFLSFAVVTSNIVALDDNNQLHVWDLSNFGGPKIVSTTKF
DPVKSVLTPHPHFRHSGPFRCSSITLSPSHTHVFLALQTGEIKTFDLTCFRKSPYTVPNL
WKLHIKDMAASGVPIAADLNSLLLLEVVIHPRDLNLVFVAYTGGVILSDLTQRSSVHAYE
LVLPPGAPGGTGYGIEDIFEHRRPEVTAIAVHPTGHFFAVGHSDGSIAFWAVDDQEKPLL
VRTIETVDVNIVDADGLETYLTEGKPNSSKSIRESIFKLSWSGFSNSADLRGGDTVLTIL
GGLLTDTSPGLTTLLLPPFQPSEPPPGPSTALHPHFRDAMCRSIEPTKSFFYRTSGVVQD
YLLIPTSSPHFSGSFDPYAIIFLVDFVRSTRATEGYLFPPSGFFTREASSSDRVESRAID
VRTLRLPFSLSNGNAGILGGRLISLEKDVYHLFIGDRSVDERNLVLKGGRAFADQTKQNE
LRLSKYQPPRILMTYHLNLKVQFFDVSAQLLVSSGTDPLQNHFPDAFPTMTIDLSDVVSN
ATGDRIFFPDKETSIHSVEVAPEALEFAVVLNTGDVVVYRSSPTSPNVANIPDSQITPLK
QVVPQPEKRLSPYFLIPAGKGNVEACALSDIGFLAVSYSDGSLLILDMRGPRIIHSAVVK
KHRAKPTIGLSGVGHHASHFDVVTSLVWTIAPLSKDFEARVRLIASCSSGDSEVFTLVPS
GNPASWKVSGEPITIKGIWDPIYSVVIDSKTGALKKPNPARLAASLRPTPKDNSHSFFLV
VGKKGARCFTDIDGDRIGKAEWRHKAGVTQVAQLVEHMGSRALVVVTEKNEVLTYSLPQL
EHLHDFEHALTSSPLLTIDESGDFVSWARSPISGIIDSATYGTLFDIRRLHAPADLDFTN
INRNLAAQPQPVSLGPVSLMGSWFQTAQALTGAQIDDILGGPDRPTPKKPRDREATEDAA
MSAEAGVASTAGSAAASIAASAAAAQANIYNRLTSALGERGQLLGNLEESFSALEAGSKS
MVAQAKRLAAQQTTKSWFGL
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgttctcgaaacaacacgaacatgttagtttcattccggacctgtcccctgagcttcgc
gacgaaggggattggatgatcgggcgactgagaaccttcgaattcctgattgatgtctcc
tcattcgccattgaaccaacttctggccttttggcggtcggtacgtctagcgggagtatc
tacttgtacggcggcgcgggtgtggaatgtaagataactctgccccaagactttgcagtg
cgcttcctgtctttcgcggtcgtaacatccaatatcgtcgcgcttgatgacaacaatcag
cttcatgtttgggatctttcgaactttgggggaccaaagatcgtctcaaccacaaaattt
gatccagtcaagtcagttctcacaccacacccccactttagacactcaggtccatttcga
tgcagctctattaccctttcgccttcgcatacacacgttttccttgccttgcagactgga
gaaatcaaaacatttgacctcacttgctttcggaagtccccgtacaccgtgccaaactta
tggaaactccacattaaggatatggctgccagtggtgtccctattgctgccgatttaaac
tctctcctacttctagaagtagtgatacatccacgagatctaaatttggtgtttgtggcc
tacacaggaggagtgattttgagtgaccttacccaacgaagcagcgttcatgcatatgag
ctagtccttcctccaggtgcgcctggcgggacgggatacggaatagaggacatattcgag
catcgccgaccagaggtaacggcaatagcagtacatccaacagggcactttttcgcagtt
ggacattctgacggctctatcgcattttgggcagtagatgaccaagaaaaacctctgctt
gtccgtaccatcgagacagtcgacgtcaatatcgttgatgctgatgggctagagacttat
ctgacggagggcaaacccaattcttcaaagtccatccgagaatctattttcaaactttcc
tggagtggattctctaactcagcggatctgaggggcggagacactgtattgactatcttg
ggcggtcttttgacggacacgtctcccggcttgaccactctcctccttcctccgtttcaa
ccctcggagccacctcctggtccgtctactgccctgcatccgcactttagggatgccatg
tgccgatctatcgagcctacaaaatctttcttctatcgtacgagtggcgttgttcaagat
tatctcctgattcccacaagtagtccccacttttctggcagtttcgacccgtatgctatc
atatttcttgttgattttgtcaggagtacacgagctactgaaggatatttatttccgcct
tctggtttttttacacgagaagcctcgtcttctgatcgggtcgaaagcagggccatcgac
gttcgcaccttgcggctccccttctcgctttcaaatggcaatgctggcattcttggcgga
cgcctcataagcctagaaaaggacgtttaccacctcttcataggcgatcgatcagtagat
gagcggaatttggtgctcaaaggtggtcgagcatttgcagatcaaacgaagcagaacgag
ctcaggttatccaagtatcaacctccccgcattttgatgacttaccatctcaacctcaaa
gtccaattttttgacgtcagcgctcaactgttagtcagttctggcactgatccactacaa
aaccatttccccgacgcttttccaacaatgacgatagatttgagcgatgtggtttccaac
gctactggtgaccgaatattcttccccgacaaggaaacatcaatccattctgttgaagtc
gcgccggaggcgcttgagttcgcagtggttctcaatactggggatgtcgttgtttatcgg
tcatcaccaacttcgcccaatgttgcaaacatcccagacagtcaaatcactccactcaag
caggtagtgcctcaaccggaaaaacgactctctccgtactttttgatccctgctgggaaa
ggcaacgtggaagcctgcgctctctctgacattggttttcttgccgtctcgtattcggat
ggttcccttttaatccttgacatgcgcggcccgagaatcattcatagcgcagtcgttaag
aaacacagggcgaagcctaccattggtttgtctggagtaggccaccatgcgtctcacttt
gatgtagtcacgtcgttggtctggacaatcgctccgctttcaaaagacttcgaagcgcgc
gttcgcctcatcgcttcctgctcatctggcgatagcgaggtgtttacactcgttccgtcc
gggaatccggcctcctggaaagtatctggcgaaccaatcacaatcaagggaatatgggac
ccaatctatagtgttgttattgatagcaaaacaggggcgttaaagaaacctaatccagcg
aggctagcagcatcactgcgacccactcccaaagacaactcccactcgttcttcttagta
gttggaaaaaaaggtgcacgatgctttaccgatattgatggtgatcgtatcggtaaagca
gagtggcgacacaaggcaggagtcacacaagttgctcagttggtcgagcacatgggttct
cgtgcccttgtcgttgtaaccgaaaaaaacgaggtcttgacgtactcgttgccccaactt
gaacatcttcatgactttgagcatgctctgacgtcgtctccgctattgactattgatgag
agtggagacttcgtctcctgggctcgaagccccatatcgggaatcatcgatagcgctaca
tatggaaccctattcgacatccgtcgcttgcatgcccctgcagacctcgatttcacaaac
atcaatcggaacctcgctgcccaaccacaacctgtctcccttgggcctgtgtccctgatg
ggatcctggtttcaaactgcccaagctttgactggtgcacagattgacgatatcttgggc
ggccctgacagacccactcccaagaaaccgcgggacagggaggcaactgaagacgcggca
atgtcggcggaggccggggtggcaagtacggcggggtcagctgcggcgagtattgctgcc
tcggcggcagcagcacaagccaacatatataatcgattaacctccgcgcttggtgagcga
ggtcaattgctagggaacctggaagagagcttcagtgcgctcgaagctggaagcaaaagc
atggtagcgcaggcgaaacggctggcggctcaacagacaacaaagtcgtggtttggcctc
taa
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