KEGG   Laccaria bicolor: LACBIDRAFT_301208
Entry
LACBIDRAFT_301208 CDS       T01044                                 
Name
(RefSeq) hypothetical protein
  KO
K12818  ATP-dependent RNA helicase DHX8/PRP22 [EC:5.6.2.6]
Organism
lbc  Laccaria bicolor
Pathway
lbc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lbc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    LACBIDRAFT_301208
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lbc03041]
    LACBIDRAFT_301208
Enzymes [BR:lbc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     LACBIDRAFT_301208
Spliceosome [BR:lbc03041]
 Complex C
  Other components
   Step II factors
    LACBIDRAFT_301208
SSDB
Motif
Pfam: OB_NTP_bind HA2_C Helicase_C WHD_HA2 S1 DEAD AAA_22 ABC_tran nSTAND3 GIPC1_GH2 AAA_30 T2SSE AAA_19 SLFN-g3_helicase PhoH nSTAND_NTPase5
Other DBs
NCBI-GeneID: 6069452
NCBI-ProteinID: XP_001874047
JGI: 301208
UniProt: B0CRL8
LinkDB
AA seq 1163 aa
MADQDLYNLEFLSLVAKITQEIDNYTGINDKTLAEFVISLHEQANKSLPDFKAQLNDVGA
DFPDSFVENVDRLILSMHPKHKKHYPKSAKANGNSKADEGNGELSEKERQKRLFPGLALQ
DKDVPPAVPDDVFLQELGDLVSGKKSRPSPTRDEPSPKRQRRGRSPSPRRRSPSPGRGRG
DRRDDRWGGRNGGGRQMDERPVIFKIYNGKVTGLKEFGAFVTLEGVMGRVEGMVHVSSIQ
TGARANSASDLLSRGQQVKVKVMSVAGNRIGLSMKDVDQVSGRDLTPHLRIMSEAELEEE
RVRAARASSGANALPLRSKDEGPVRSAKRLTSPERWEIKQLISSGAIDASEYPDLDEDFN
NPMAHVQVEEELDVEIREDEPPFLAGQTKRTLDLSPVKIVKAPDGSLNRAALAGASLAKE
RRELRQQEANEEADSQARDFSQPWLDPMSKETDKMFAQDLRGNLKGQKAGEVPSWKQQSF
NKATTFGEITSLSIQDQRKSLPIYKLRDPLLKAIEEHQVLIVVGDTGSGKTTQMVQYLAE
SGYAERGRIGCTQPRRVAAMSVAKRVSEEVGCRLGQEVGYTIRFEDCTSPETRIKYMTDG
MLQRECLIDPLCSSYSVVMLDEAHERTIATDVLFGLLKKAVKRRPDLKLIVTSATLDAEK
FSKYFFGCPIFTIPGRTYPVEILYTKEPESDYLDASLITVMQIHLSEPPGDILLFLTGQE
EIDTACEILFERMKALGPKVPELLILPIYSALPSEVQSRVFEPTPPGARKVVIATNVAET
SLTIPGIYYVIDPGFSKQNAYDPKLGMDSLVVMPISQAQARQRSGRAGRTGPGKCYRLYT
EAAYRNEMLPNSIPDIQRTNLAATILQLKAMGVNDLLSFDFMDPPPAPTMLTALESLYAL
SALDDEGLLTRLGRKMADFPMEPPLAKMLIASVELGCSEEILSIVAMLSVQSVFYRPKEK
QGQADSKKAKFHQPEGDHLTLLTVYNGWKAANFSNPWCYENFIQARSMRRAQDVRKQLLG
IMDRYKHDILSAGRDYNRVRKAICSGFFRNAAKKDPQEGYKTLVEGTPVYIHPSSALFNR
NPEWLVYHELVLTTREYCHNVTAVEPKWLVEVAPQFFKVADANKISKRKRQEKIEPLFNK
YEKPDEWRLSKIKRSARSSQTFG
NT seq 3492 nt   +upstreamnt  +downstreamnt
atggccgaccaggacctctacaaccttgaattcctttccttggtcgcgaaaataacacaa
gagattgataattacactgggatcaatgacaagactcttgcggaattcgttatctccctc
catgagcaggctaacaagagcctgcccgactttaaagctcaactaaatgatgttggtgcc
gactttccagattcttttgttgagaacgtagatcgtttgatcctcagcatgcaccccaaa
cataagaagcactacccaaaatctgcgaaagcgaacgggaactctaaagccgacgaaggt
aatggtgagctcagcgagaaggagaggcagaagagacttttccctggacttgctctgcaa
gacaaggacgtacctcctgccgtcccagatgatgtgtttttgcaagaacttggcgacctt
gtttctgggaagaagtcgcgccctagtccaactcgtgacgagccatcgccaaaacgtcag
cggcggggtcgctcaccctcccctagaagaagaagtccaagtccagggagaggaagaggg
gatcgaagggatgataggtggggtggtcgcaacggaggtggcagacagatggacgagcgg
ccagtcatttttaagatatataatggtaaagttaccggcctaaaagagtttggcgcgttc
gtcactttggagggggttatggggagagtagaaggcatggttcatgtatccagcattcag
actggtgcacgagcgaattcagcgtcagatctacttagcagagggcaacaagtcaaagtc
aaagtgatgagtgttgctggcaatagaatcgggctctctatgaaggatgtcgaccaggtt
tcgggccgggatcttactccacaccttcgcattatgtctgaggccgagctagaggaagaa
cgcgttcgagcagcgcgtgcatcttcaggtgccaatgccttgccactacgatcaaaagat
gagggacccgtcaggtctgccaaacgcctgacgtcaccagagcgttgggaaatcaaacaa
ctgatatcgtccggcgcaatcgacgcatcagagtatccagaccttgacgaggacttcaac
aatcccatggcgcatgttcaggttgaagaggagttagacgtcgaaattagggaagatgaa
ccgccatttttggccggacagacgaaacgaactcttgaccttagtcccgtgaagatcgtc
aaggcacctgatggctccctcaatcgagctgctcttgctggagcgtcacttgcgaaagag
cgacgcgagttgcgacaacaagaagctaacgaagaggctgactctcaggctcgagatttc
agccaaccttggcttgatcctatgtcgaaagagacagacaagatgttcgcccaagatttg
cgcgggaatttgaagggtcaaaaggctggagaggttccatcttggaaacaacaaagcttc
aacaaagcaacaacattcggcgaaataacatcattgagcattcaagatcaacgcaagagt
ttaccaatttacaagcttcgagatcctcttctgaaagccatcgaggagcaccaagttctc
attgtcgttggtgacactggatctggaaagactacgcaaatggtacaatatcttgccgag
tctgggtacgccgaaagagggaggattggttgtacccaacctcgtcgtgtagctgccatg
tcagtggcgaaacgagtatctgaagaggtcggttgtcggcttggtcaggaagttgggtat
accatccggttcgaggattgcacgagtcctgaaacgcggataaagtacatgacggacggt
atgcttcagcgagaatgcttgatcgacccattgtgcagctcgtattctgtagttatgttg
gatgaggcgcatgagcgtacaattgctaccgatgttctctttggcctcctcaaaaaggct
gttaaacgccgtcccgatctgaaactcattgtgacttcagctactctcgatgccgaaaag
ttttcgaaatacttcttcggatgcccaatcttcaccatccctggccgaacgtatcctgtc
gagattctgtacaccaaggagccagagtcagattacctcgacgcctctctcatcaccgtc
atgcaaatccatctttcggaacctcctggtgatatcctactcttcctcactgggcaggag
gaaattgatactgcttgtgaaattcttttcgagcgtatgaaagccctgggacccaaagtt
cctgaacttctcatcctcccaatctactcagccctcccatccgaagtacagtcccgagta
ttcgagccgacgccccctggagctcgtaaagttgttattgctacgaacgtcgcagaaacg
agcttgacgatcccaggaatttactatgtcattgatccagggttctcgaagcagaatgca
tacgatccgaagttaggaatggactccttggtcgtcatgcctatctcgcaagcgcaggcc
cggcaacgttctggtcgagctgggagaacaggtcccggaaagtgctatcggttatacacg
gaggcagcatatcgaaacgagatgcttcccaactctatccccgatatccaacgaaccaat
cttgctgctaccatccttcaattgaaggccatgggcgttaacgatctgctcagctttgac
ttcatggatcccccacctgcaccgacaatgttaaccgccctggagtcattatatgcgctc
tcagcgttggatgacgagggcttgttgacgaggttggggcgaaaaatggctgatttcccg
atggaaccaccattagcaaaaatgttgattgcatctgtagagttgggatgctcagaggaa
attctttccatcgttgccatgctttctgttcaaagcgtgttctaccgaccaaaggagaaa
caagggcaggctgattctaagaaagcaaagttccatcagcctgaaggtgaccacctaacc
ctgcttacggtttacaatggttggaaggcggcaaatttctcaaacccgtggtgttatgag
aacttcatccaagccaggagcatgagaagagcacaggatgtaagaaagcagttacttggc
atcatggatcgctataaacatgacatattgtcggctggcagagactacaaccgagttagg
aaggccatttgctctggcttcttccggaatgctgccaagaaagatcctcaagagggatac
aagacgctagtcgaaggtaccccggtgtacatccatccatcttctgcgcttttcaaccgg
aacccggagtggcttgtttaccatgaacttgtgttgacaacccgcgagtattgtcataat
gtgacagccgttgaacccaaatggcttgtggaggttgcgccacaattcttcaaagttgct
gatgcgaacaaaatcagcaaacgtaagcgacaggagaagattgaaccgctgttcaacaaa
tacgagaaaccggacgaatggcgtttgtcaaaaatcaagcgcagcgctcgctcgagtcaa
acattcggatga

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