Laccaria bicolor: LACBIDRAFT_306021
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Entry
LACBIDRAFT_306021 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K14300
nuclear pore complex protein Nup133
Organism
lbc
Laccaria bicolor
Pathway
lbc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
LACBIDRAFT_306021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbc03019
]
LACBIDRAFT_306021
03036 Chromosome and associated proteins [BR:
lbc03036
]
LACBIDRAFT_306021
Messenger RNA biogenesis [BR:
lbc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
LACBIDRAFT_306021
Chromosome and associated proteins [BR:
lbc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
LACBIDRAFT_306021
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
6070770
NCBI-ProteinID:
XP_001874875
JGI:
306021
UniProt:
B0CSI8
LinkDB
All DBs
AA seq
1191 aa
AA seq
DB search
MATFSPSPAPRRSTRIRARSPTRRNPTIGRLESPSVENSNLTENELFRSAMDVDEVLPDS
GLPSTGETIYAKTEELSASFYANLPVEMKQVLRNADFCKTPYTGEIDTTTGFTLVASAQT
CFVWQHAQAIKGTPTCYIFACPQGMHQNLPLDRCNSPFHALVPHGSSREPGLILVSSTGR
IRFWNSISIGLAGGDRYDSSSLDFVDEDDHVTALVRSDPQTFIVATSLGNLYRLMITSTG
GKCHLTSKVFTQPGSRSFSSLLPSFLTVTPSMMDLKSYIRSISLGLQSSTGERDLWVLTE
ERVQKWVIKTDGWEEKKLDLGIADSLQSAVQESLGIRQEPGEWLQWSIELLDLAVEDAGM
VAVLLSYCGKEGGVSVRRLYALAHLAFEGKSFEIAAIKTVPYQSTSTSSVPAHPRIQVLF
AGSLIGVQFGDAVALCARESEYQDRLELKSTIDRTLGVGVSRTDNTLLVLTATTLMKVHL
NMEKILAFNPETGRTNLIKSIMMQAILYGPSPENPLHFSFPPEVDEESLMRGAEQLSKAV
LRSDPEVVRNNHDLSAQLTSRKDRLSWLIGFINDNSVLVKMSQRSRQKLAMDAEKLYASH
QLWLQYNELLAALPKHSVLNDCVHAYMADVADGPHEDVMRAFFRLRVSDVGSLLKKILDI
VTLSSKQAGRDVSQLLAEANSILVTVLRSAFDYRAYNLKVYGIDLPMIFPWTSRPAVVDT
VLALFDATTKAVESRYFDSSSQGKLQQSQLPELAALLFECIKERLDWLSSPIAAAEPGVG
RDKDELEHRFALLRPEVLETLRRFGHQDTAFQLAEKYHDFTSLVALCHKDVAYPPTENPN
LDRIQSYVDRFKYDFASQLYRWYIQHGELRVMFNQSSALQTGYLERFFSEEPNPAISWIY
NIGKEHYGRAAADLLEEASKASNLEVKHLMLSVGKLSHLAQLHETSVSADQSVLDAFHDD
LDFIGVHETLLQDFRTAIEGLRGRHSLENQIEHITKAKASPLIDQNALANVFKDLLRQLL
QGRALSVEDIVDLLTLKDNTTSVEDYATALHLLARVDNLPEARKLSAFRTIWRRIFLHDD
WDNIRRTANISDAELKERFQNTALYATLHLILPSRNQPNGFVTEPNFALVIPSTAEVASR
WPGISEEQVDAIVRDYTTECDRLGDLDLEDVYHRVYELAVHDKVWQGSTAE
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atggcaacattctctccttccccggcgcctcgtcgctcgacccgaatacgggctagatca
cctacccgaaggaacccgactattggtaggctggaaagcccctccgtggaaaattcaaac
ctcaccgaaaacgagttgtttcgttctgcaatggatgttgatgaagtcctaccagattca
ggactaccatccactggagaaactatatacgcgaaaactgaagagctctccgcgtcattt
tatgccaatctacctgtggagatgaaacaagttttgaggaatgcagatttttgcaaaaca
ccgtacactggcgaaattgacaccacgacgggatttactttggtggcatccgcccagaca
tgctttgtctggcaacacgctcaggccatcaaagggactcctacatgctacatattcgct
tgccctcagggcatgcaccagaacttacctctagatcgttgcaattcacctttccatgcc
cttgttccccacggatcgtctcgggaaccaggtctgatcctcgtctcttctacaggtcga
attcgtttctggaatagtattagtatcggcttggctggaggcgatcgttatgacagctcc
tcgcttgattttgtggacgaggatgaccatgtaacggctcttgtccgatccgatcctcaa
acttttattgtggcgacgagtctaggcaatctctatcgcttgatgattacatcaactggc
ggcaaatgccatttgacttcaaaggttttcacccaacccggctctcggtcgttttcaagt
cttcttccatcttttctcactgtcaccccttctatgatggatctcaagtcatatattcgc
tcaatttcacttggccttcagtcatcaacgggggagagggatctatgggtactcactgaa
gagagggttcaaaaatgggtcataaagactgatggctgggaagagaaaaaattggatttg
ggaatagcagattctcttcaatctgcggttcaagagtccttaggtatccggcaagagcct
ggagagtggttgcaatggagtatcgagcttttggacttggccgtggaagatgctggaatg
gttgctgttcttctatcgtactgtggaaaggagggtggcgtaagcgttcggcgcttgtat
gctctcgctcacctggcttttgagggcaaatcgttcgaaattgcggcaataaaaactgtg
ccataccaaagcacgtcgacatcttcggtgccggcacaccctcgaatacaggtacttttc
gcaggttctttgattggcgtacaatttggcgacgcggttgctctatgcgctcgagaatcc
gaatatcaagataggttggagttgaaatcaaccattgacaggacgctgggcgtaggcgta
agccggacagataatacattattggttttgactgccaccacattgatgaaagtccacttg
aacatggaaaagattcttgctttcaaccccgaaactggccgaaccaatctgatcaagtcg
atcatgatgcaggcaatactgtatggcccgtctcctgagaatcctttacatttcagtttt
ccccccgaagtagacgaagagagtttgatgcgaggtgccgaacaacttagcaaggccgta
cttcgttcagatccggaagtcgtgaggaacaatcatgacttgagtgctcaactaacgagc
cggaaagaccgtttaagttggcttattgggtttatcaatgataattcagttctcgtcaaa
atgtcgcaacggagtcgccaaaagttggcgatggacgctgaaaagttgtatgcatctcat
cagttatggctgcaatataatgaacttctcgcagctctgcctaagcacagcgttttgaac
gactgcgttcatgcatatatggcggatgtggcagatggtccacacgaagacgttatgagg
gcctttttccgtcttcgcgtgagcgatgtgggaagtctcctcaagaaaatattagatatt
gtcactctatcgtcgaagcaggcgggacgtgatgtatcacagctgttggcagaagctaat
agtatccttgtgacggtgttgagatcagcgttcgattatcgcgcatataacctcaaggtg
tatggcattgatcttcccatgattttcccatggactagtcgacctgcagtcgttgacact
gtgctggcattgttcgacgccaccaccaaggctgtggaatctagatactttgattcgtca
agccaaggcaagctacaacaatcacagcttcccgagcttgcggctcttctttttgagtgt
atcaaagaaagattggactggttgtcaagccccattgctgcggctgagcccggtgtcggg
cgcgataaggacgagctggaacatagatttgcgcttttgcggccagaagtccttgaaaca
ttacgtcgattcggacatcaggataccgcattccagcttgcagaaaaatatcacgatttt
acctctctcgttgcactgtgtcacaaagatgttgcatacccaccgacagaaaatccgaat
ctcgaccggatccagtcatacgttgatcgattcaaatatgattttgcgagtcagctttat
cggtggtatatccaacatggcgagctccgtgtcatgtttaatcaatcctctgccctgcag
accggatatctggagcgatttttctctgaagaacccaacccggcaatctcatggatctac
aacattgggaaagagcactacgggcgggcagcggcggaccttctcgaggaagcttccaag
gccagcaacctcgaagtgaaacatttgatgctcagtgttgggaagctatcacacctagcg
caactccatgaaacaagtgtctctgctgaccagtctgttctcgacgcctttcatgatgac
ctcgatttcatcggcgtgcatgaaaccttgttgcaggacttccgaacagcgattgaaggg
cttcgcggccggcactctctggagaatcaaatcgaacacattaccaaagcgaaggcttcc
cctctcatagaccaaaatgccttggcaaatgttttcaaagacctgctgaggcagctttta
caaggcagggccctgtcggttgaggatatcgtcgacctcttgactctcaaagataacaca
acaagtgtcgaagactatgctacggctctgcatcttttggctcgcgtcgataatttacct
gaagctcgaaaattgtctgctttccgcactatttggaggcgaatcttcttgcatgacgac
tgggataacattcgaagaactgccaacatatctgatgctgaattgaaggaacgcttccag
aataccgctttatacgcaacgcttcatttgatccttccgagtagaaaccaaccgaacggt
ttcgtgactgaaccaaatttcgcattggtaattccatcaactgcggaggtcgcctctcgg
tggcctggtatttcagaggagcaagtggacgcaatcgtccgggactacactacggagtgt
gataggcttggggatttggacctggaagatgtataccatcgggtgtatgagctagccgta
catgataaggtatggcaagggtcgacagccgagtga
DBGET
integrated database retrieval system
