Laccaria bicolor: LACBIDRAFT_306417
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Entry
LACBIDRAFT_306417 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K14571
ribosome biogenesis ATPase
Organism
lbc
Laccaria bicolor
Pathway
lbc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LACBIDRAFT_306417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lbc03009
]
LACBIDRAFT_306417
Ribosome biogenesis [BR:
lbc03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
LACBIDRAFT_306417
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_16
AAA_22
AAA_33
AAA_5
TIP49
AAA_14
AAA_28
RNA_helicase
AAA_2
Mg_chelatase
NPHP3_N
nSTAND3
ABC_tran
IstB_IS21
nSTAND_NTPase5
AAA_17
AAA_3
AAA_7
TsaE
AAA_18
Rad17
NACHT
Vps4_C
NB-ARC
Parvo_NS1
Sigma54_activat
DUF815
Cytidylate_kin2
Motif
Other DBs
NCBI-GeneID:
6080851
NCBI-ProteinID:
XP_001885292
JGI:
306417
UniProt:
B0DMV4
LinkDB
All DBs
AA seq
770 aa
AA seq
DB search
MDASGSNVLNRSMQGLWSTHRRGKLNLNSPSSPGITPSETPLLEGPSTPAATVTTEPSAV
VPTIASTEVAAPIDSATPINGKRKVRSSRTTEASTSNKKAKVSSTAGVAISKDHTPPTAR
LSDLGGVEACVEKMLELVAMPLCHPEVYLHTGVQPPRGVLLHGPPGCGKTLLANAMAGEL
GVPFISISAPSIVSGMSGESEKTLRDTFEEAKRVAPCLLFIDEIDAITPKRESAQREMER
RIVAQFLTCMDDMSWDKTDNKPVIVMGATNRPDSLDAALRRAGRFDHEISMGVPDEEARS
KILQVLCAKLRLDGDFNFTTLAKATPGYVGADLSALTGAAGIIAVKRIFKQLSDGTLILP
DPTPDGVSSTLEQDVSMIIDPPSTPQAQADPPPPKASILSGLSSQLSAGSIAHFLIAHPD
PLTESQLAPLCITSADFILALKQVQPSSQREGFATVPDVTWADIGALHATREELHMAIVQ
PIRRPELFSAVGIEAACGVLLWGPPGCGKTLLAKAVANESRANFISVKGPELLNKYVGES
ERAVRQVFSRARASSPCVIFFDELDALVPRRDDSLSESSARVVNTLLTELDGLDTRKAVY
VIAATNRPDMIDPAMVRPGRLDKLLYVDLPQPEERSEILRTMTRKVPLGNLEGQSADLIR
ERIELLVKEKCDGYSGADLAALVREAGVIALKRTLGALDQMGEDVAGAEGPKVLVDVTDF
IKALEKIGPSVSVSQRRKYESLRSKLSGLPVRVGKDEEEKVLDGNISTRS
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgtcgggctcaaatgttctcaacagatctatgcaaggcctttggtctacccat
agacggggtaaattgaacctgaattcaccatcatctcctgggatcactccttccgaaaca
cccctcctggaagggccctcaactcctgccgcgactgttacgacggagcctagtgcagtt
gtgcccacgatagcgtcaactgaggttgctgctccgatagattctgccactcccataaat
gggaaaaggaaggtcagatcatcacgtacgactgaagcaagtacgagcaacaagaaagcg
aaagtatcctccactgcaggggtagcgatatccaaagaccacaccccccctaccgcacgt
ttgtcggacctcggcggggtggaagcttgcgtggaaaagatgttggagcttgttgcgatg
cctctctgtcatccagaggtttatctgcatactggagtacaacctccgcgtggagtgttg
ttgcatggccctccaggttgtgggaagactctgcttgcaaatgctatggctggggaactt
ggtgtaccattcattagtatatcggccccttctattgtgtctggaatgtcgggcgagtca
gaaaagacacttcgagatacttttgaagaggccaaacgtgtcgcgccatgtttgcttttt
attgatgaaattgatgctattaccccaaaacgagaaagcgcacaacgggaaatggaaagg
cgcattgtcgcccagtttctcacctgcatggatgacatgtcttgggataaaacggacaac
aaacctgtcattgttatgggtgcaacgaataggcccgactccctagacgccgcgctgagg
cgagctgggaggtttgatcatgagataagcatgggagttccggacgaagaagcgcgatcc
aaaatcctacaagttctctgtgccaaactgcgcctcgatggtgatttcaactttaccaca
ctagcaaaagccacaccaggatatgttggtgccgatctctcggctctcactggtgcagct
ggcatcatcgccgtgaaacggatattcaaacaactttccgatggtaccctcatccttcca
gaccccacgcccgatggcgttagttccaccttagagcaggacgtgtcaatgattattgat
cctccctcgacacctcaggctcaggctgacccacctcctccaaaagcctctatcttgtca
ggcctatcctctcaactctccgcaggctcgatagcccatttcctcattgcccatccggac
cctctgactgaatcacaacttgccccattgtgcataacatctgccgactttatcctggca
ctgaagcaggtccaaccatcgtcccagcgtgaaggcttcgccactgttccagatgtgacc
tgggcagatattggagccctgcacgcaacgcgagaggagcttcacatggcgatcgtacag
cccattcggcgtccagagctcttcagcgcagtaggcatcgaggctgcttgcggcgttttg
ctttggggtcctcctggatgtggaaaaacacttctagcaaaggctgtagccaacgaatcc
cgggcgaacttcattagtgtcaaaggtcctgaactcctgaacaaatatgttggcgagagc
gaacgggctgttagacaggtgttctcccgggcgcgggcctcatcaccttgcgtgatattc
tttgatgaacttgatgctctagttccccgtcgtgacgacagcttgtctgaatcttcagca
cgcgtggtgaacacattactcactgaacttgatggcctggacactcgcaaagcagtctac
gttatcgcagccaccaaccgaccagacatgatagatccagccatggtccgtccaggtcgt
cttgacaagctgctctacgtcgacctcccccagcctgaggagcgttccgagatattacgc
accatgacacgcaaagtaccattgggaaaccttgagggacaatcagcggatctcatcaga
gagagaatagagctgctcgtcaaagaaaaatgtgatggttatagtggcgctgacctcgct
gctcttgtccgcgaagcaggcgtgatcgctttgaagcggactctcggggcattggatcaa
atgggcgaggatgtggctggtgcagagggtcccaaggtcttagtagacgttacggacttc
atcaaagctttggagaagattggtccaagcgtcagcgtttcgcaacgtaggaaatatgaa
tcgttgcgctccaagctctctggtctaccggtcagggttgggaaggacgaagaggaaaaa
gtgctggatggtaatatcagtacaagatcatga
DBGET
integrated database retrieval system