Laccaria bicolor: LACBIDRAFT_307062
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Entry
LACBIDRAFT_307062 CDS
T01044
Symbol
CPC16201
Name
(RefSeq) condensin complex subunit SMC1
KO
K06636
structural maintenance of chromosome 1
Organism
lbc
Laccaria bicolor
Pathway
lbc04111
Cell cycle - yeast
lbc04113
Meiosis - yeast
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
LACBIDRAFT_307062 (CPC16201)
04113 Meiosis - yeast
LACBIDRAFT_307062 (CPC16201)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lbc03036
]
LACBIDRAFT_307062 (CPC16201)
Chromosome and associated proteins [BR:
lbc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
LACBIDRAFT_307062 (CPC16201)
Meiosis-specific proteins
Cohesin complex and associated proteins
LACBIDRAFT_307062 (CPC16201)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_29
AAA_23
SbcC_Walker_B
OmpH
ABC_tran
DUF7213
DUF5858
Motif
Other DBs
NCBI-GeneID:
6081358
NCBI-ProteinID:
XP_001885795
JGI:
307062
UniProt:
B0DPA0
LinkDB
All DBs
AA seq
1243 aa
AA seq
DB search
MPLVRIEVCDFKSYRGHQTIGPFRTFTSVIGPNGAGKSNLMDAISFVLGVKSAQLRSSQL
KDLVYRGRRLAKNNEEDADGVSDQEEEEQEQEGEGTAKKAWVLAVIHDKDGKEWKFQRTI
STNGASEYKLDKKVVTYSAYNAALISLNILVKAKNFLVFQGDVEAVASQSPRELSRLIEQ
ISGSLELAPEYEKAKEAQDKATENATFNFTKRRGIAGEIKQYKEQKGEADRFESLCQQRD
ELILQRILVKLFHIEEAIENNTRAIVKKNKELTGLREEQRVHDYALEAARTEQAKARTAV
MQKEKGIKKAEKALDGKKPELVTIEAHITHATRKMNNAEKSKEELVKDLKTRQEKFDRLQ
TELKSVRRDADKAQEEQRKASHHNVALTEESLDEYRALKSSSSKLAVDERQTLETLLREE
KTSSRTLAQLTEKQKGYEEKKELRSEDLRVQSARKTELDAKISSLQANLTSVRQELDNQR
AEREKIAKLDAEVDEKLQNVYQQLLQAGVDKHESERETRLKETLASLQRIFPGVRGRVVD
LCKPIQRKYEAAVSVVLGRNIDAIVVDEEKTAIDCIEYMRNQRAGQATFIPLDTIQVKPI
NDKFRSFAKGARLAVDVVQYEPAIERAIHHACGNALVCDTMEVARYVCYDKGQEVKAVTL
EGTIIHKSGLITGGRSTHNNSKKWDENDVQGLIRVRDNLQSRRLELSKQKPRAKTDENLV
SEVSRLESAITLARDDLAACKSRLNGLKEELKHIDKELKSNTPELKKAQTIDAALQDKMQ
RLKHTINAAEDGIFVAFCRKIRVSNIREYEERQLKVAQEESQARLRFDTQIARLSNQSDF
EEEGLKSAKERLERLEGMIKTERVNLSKLEEQNTAAAEDIAVAEQGIAKLRAELSTVQEV
LEEKTKVVDQVKKTTSKASKVLDQALKEIATANDEIEKLALDRSATYRKCRLEEVKLPLL
EGNLKHVPMEENLREDVAMDVDEDEDGTQRPKVVADYGIEVDFESIEDDERSEDPADANA
RYDKEIANITAEIERMAPNMKAIERLDDVETKLEQTEREADKARKESKNARDHFNDVKSR
RCELFNKAYSHISDNIDQVYKDLTKGKAAPMGGVAYLSLEDSEEPYAGGIKYHAMPPMKR
FRDMEQLSGGEKTVAALALLFAIHSYQPAPFFVLDEVDAALDNTNVAKIANYIRHHASDD
FQFIVISLKGSLYERGNSLVGIYRDQEVNSSRTLTLDLTQYDD
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcgtgaggatagaagtctgcgacttcaaatcatacaggggtcaccaaacgata
ggtccattcaggacttttacgtcggtgattggtccaaatggcgcgggcaagtccaatctg
atggatgccatatcgttcgttctaggtgtcaagagcgcgcaattgcgaagttcgcagctc
aaggacctcgtttatcgtggtcgaagactggccaagaacaatgaagaggatgccgacggg
gtttcagatcaagaagaggaggagcaggagcaggaaggtgagggcacggcgaagaaggct
tgggttctggctgtcatccatgacaaagatggcaaggaatggaagtttcagcgaacaata
tccacgaatggcgcgtcagagtacaaactcgacaagaaagtcgtcacttattccgcttac
aatgccgcccttatctctcttaacatcctcgtaaaagccaagaatttccttgtattccaa
ggggatgtcgaagctgtcgcctcgcaatcacctcgagaactttcgcgcctcattgaacaa
atcagcggctcactagagcttgctccagagtacgaaaaggccaaggaggctcaagacaaa
gcgactgaaaacgccacgtttaatttcactaaacggagaggaatcgcgggggagataaag
caatacaaggagcaaaaaggcgaagcggatcggtttgagagtctctgtcaacaacgggat
gagttgattctgcaacgtatactcgtcaagctcttccacatcgaggaagctattgagaac
aatacccgcgccatcgtcaaaaagaacaaagagttgacgggtctacgcgaagagcagaga
gtccatgactacgctttagaggcagcgcgaacggagcaggcgaaggctaggacggccgtc
atgcagaaggagaagggaatcaagaaggccgagaaagcgttggatggcaaaaaacctgaa
ctcgtcacgatcgaggctcatattacgcatgctacgcgaaaaatgaacaacgctgagaaa
tcgaaggaggagcttgtcaaagacctcaagactcggcaggagaaatttgatcggctgcaa
actgaactcaagagtgtgcgtcgagatgccgacaaggctcaagaggagcagagaaaagca
tctcaccacaacgtagcgctgaccgaggaaagcctggacgaatatcgtgctttgaaatcg
tcgtcaagtaaactcgccgttgatgaacgacagacccttgaaactcttcttcgtgaagag
aagacttcgagcagaacacttgctcaacttacggaaaagcaaaaaggttatgaggagaag
aaggaattgcgaagcgaggatctccgagtgcagagtgctcgaaaaactgagctcgacgcg
aaaatttcgtcactacaagcaaacctgacgagtgtccgacaagaactggataatcaacga
gctgagagagagaaaatagcgaaattggacgcggaagtagacgagaaacttcagaacgtt
tatcagcagctcttgcaggccggcgttgataaacacgaatcggaacgtgaaactcgcctt
aaggagacgttggctagcctgcagaggatcttcccaggcgttcgagggagggtcgtcgac
ctctgcaaaccaattcaacgaaagtacgaagcagcagtgtctgttgtcctcggacgcaac
atcgacgccattgtcgttgacgaggagaagacggccattgattgcattgaatacatgcgt
aaccaacgtgctggacaagccacctttataccacttgatacaattcaagtgaaacccatc
aacgacaaattccgctccttcgccaagggcgctcgtttagccgtggatgtggttcagtac
gagcctgcgattgagcgagctatccatcacgcttgtgggaatgctcttgtttgcgatacc
atggaggttgcgagatatgtgtgttatgacaaaggtcaggaggtgaaagctgttactttg
gaaggcacgatcattcataagagtgggttgattactggaggacgaagtacgcacaataac
agcaagaaatgggacgagaatgacgttcaagggttgattcgcgtccgtgacaacttgcaa
tcgcggcgcctcgaactcagcaagcagaagccccgcgcaaagacggacgaaaatctcgtc
tcggaagtttctcgtcttgaatcggcgataactttggctagagatgacctggcggcttgc
aaatctcgccttaatggcttgaaggaagagttaaaacatattgacaaggagctaaagagc
aacacccccgagctcaagaaggcacaaactattgacgctgctctgcaagacaagatgcaa
cgtctgaaacatacgataaacgcagcggaagacgggattttcgtggccttttgccgcaag
atcagagtgtcgaatatccgagaatacgaggagaggcagttgaaggttgctcaagaggaa
agccaagctcgcctgcgcttcgatacccagattgcccgtctctcgaaccagtctgacttc
gaggaggaaggcttgaagtctgcgaaggaacgcttggaacgactcgaaggcatgatcaaa
actgaacgcgtgaacttgtccaagttagaagagcagaataccgctgccgcggaggatatt
gctgtcgctgaacaaggcattgccaagttaagggcagaactctccacagttcaagaggtg
ctagaggagaagacgaaggtggttgatcaggtgaagaagaccacgtcaaaagcatcgaaa
gtactcgaccaagcattgaaagagattgctacagctaacgacgaaatcgagaagctcgcc
cttgatcggtcggctacttaccgcaaatgtcgccttgaggaggtaaagctgccacttctg
gaaggcaacctcaagcacgtcccaatggaggagaatctccgagaggatgtggccatggac
gttgatgaagacgaagatgggactcagaggcctaaagtggtcgctgattatggaattgag
gtcgactttgagtctattgaggatgacgagcggtctgaagacccggcggacgcgaatgca
agatacgataaggagattgccaacatcactgcagagatcgaacggatggcgccaaatatg
aaagcgatagaacggcttgatgacgttgagacgaagctcgaacaaacggaaagagaagct
gataaggctcgcaaggaatctaagaatgcccgtgaccacttcaatgatgtgaagagccga
cgttgtgaactgttcaacaaagcttacagtcacatatccgacaatatcgatcaagtttac
aaagatctgacaaaagggaaagcggctcccatgggaggcgtcgcatatctgagcttggaa
gatagtgaggaaccgtatgctggcggtatcaagtatcacgccatgcctcccatgaagcgt
ttccgagatatggagcaactttcaggtggtgagaagactgtagctgccttggctcttctt
tttgccatccatagttatcagccagctcctttcttcgttttagacgaggttgatgctgct
ctcgacaacacaaacgttgccaagattgcgaactacattcggcatcacgcgtcagatgac
ttccagttcattgtaataagtctgaaaggctccttgtatgaacggggtaactccctcgtg
ggcatctatcgggatcaagaagtaaacagctcaaggactttgactcttgacctcacccag
tacgatgattag
DBGET
integrated database retrieval system
