Laccaria bicolor: LACBIDRAFT_307082
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Entry
LACBIDRAFT_307082 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
lbc
Laccaria bicolor
Pathway
lbc04138
Autophagy - yeast
lbc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
LACBIDRAFT_307082
04148 Efferocytosis
LACBIDRAFT_307082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lbc04131
]
LACBIDRAFT_307082
Membrane trafficking [BR:
lbc04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
LACBIDRAFT_307082
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
Motif
Other DBs
NCBI-GeneID:
6081447
NCBI-ProteinID:
XP_001885742
JGI:
307082
UniProt:
B0DPC4
LinkDB
All DBs
AA seq
818 aa
AA seq
DB search
MSSTFPRSSILVLTPTSIHSLVPSTIISQVSSLIDTHQLEDALALADQRKRRLEGNLIVN
EDDVRSFSLPILWGFIVIRIIIDNHKTQKQEDEMRYVYQLIGIQCFAETRFEDAGKALFN
GDFDPRVIISYFPDVVGRMFGDEDEMDVFRGVKERMPSQGGVGDLITKNLVRNYSPHLAP
SSPPTAELFKILKQNSLDMLETFLRKWRTKRAIEREAGGSWGELCDPVVDTVLTKLYARS
PARRKDLYALISDPSNSVVLSEVEPELRKAGLYNALCMLFGMKGGEEGRGRVLDLLKGLV
EGTIKDDDVLDPLERLVSLVVEKKDRALTQKWGLWLVRRDLERGLKVSFFSSHSYIAPGI
TWYFSKQLLIPRETGKRREKPEEDVALLDQIEEANPAAGVQYLEYLVLRRRSNSRELHTR
LAIACIDQVLGYLRDDVGVLKLWRAKAASFASSIRSSPSVPSSSSSTITPNTRTPTSPPS
STSLPRTQSFLAYYTSTTPDSPHKRARLKTILVLSLSELYDPDAVRRRLDEAGEKERGVL
VFERALLEGKTQNHRAALELLVHELQDPISAEAYCTLGGEVVSERTLRSAAESAGLVGVA
MFAAAFSSASPIQRERSGQGGKLQSQTGMRKIQAPSVITRQKTVDEGLKKELLKVLLEVY
MDGDDQVNSERATHLLNSQAVNLDVVDVIELVPPLWPVNSMASFLVRSFRRTQHTLLEGK
IVKNISVGQNLEVKDRSWKILQDEGAVIEEADPEDELEDGETEGEKGVLSEKIAEARGVV
HALRLSVNGSGDGEGEKRNLRGLVDDAGGGEVGGDELV
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgacattcccccgctcctccattcttgtcctaacccccacctccatccattcc
ctcgtgccatcaaccatcatatcacaagtctcctccctaattgacacgcaccagctcgaa
gacgcgctcgctctcgctgatcagaggaagaggaggttggaggggaacttgatcgttaac
gaggatgatgttcgttcgttctctctccccattctatggggctttattgttatcagaata
attattgacaaccataaaacgcaaaaacaggaagacgaaatgcgctacgtgtaccaactc
attggtatccaatgttttgcggagacgaggtttgaagatgccggcaaggcgctgttcaat
ggtgacttcgatcctcgagtcatcatctcgtatttcccggacgttgttgggcgtatgttc
ggggacgaagatgagatggacgtgtttcggggtgtgaaggaacggatgccttcacagggg
ggcgttggtgatttgatcaccaaaaacctagtcaggaattactccccgcacctcgcacct
tcttccccgcctaccgcggaactgttcaagatcctcaagcaaaactctttggacatgctg
gagacgtttttgaggaaatggagaaccaagagggccattgaaagggaggcgggggggagt
tggggggagttgtgtgatcctgtagtagacacggtccttacgaagctctacgcacgctct
ccagctcgtcgcaaagacctctacgctctcatctcagacccttcaaactctgtagtcctc
tcagaagtcgagccagagcttcgcaaggcggggttgtataatgccttgtgtatgcttttt
gggatgaaagggggagaggaggggaggggaagggtattggatcttttgaaggggttggtg
gaaggcacaataaaagatgatgacgtccttgaccccctggaaagactcgtctcgctggtt
gtggagaagaaggatagggcgctgacgcagaaatgggggttgtggttggttaggcgggat
ttggaacgggggctgaaggtgtctttcttttcgtcccactcctacatcgcacctgggata
acatggtacttttccaaacagctccttatacctcgcgaaacgggcaaacgccgcgaaaaa
cccgaagaggatgttgcattgcttgaccagattgaggaagccaaccctgcagcgggggtt
cagtatcttgagtatttggtgcttaggcggaggagtaactcaagggagctgcatacaagg
ctagcaatagcgtgtatagaccaggtacttgggtatttgagggacgatgtcggggtgttg
aagttgtggagggcgaaagcggcatcgttcgcttcgtctatacggtcctccccctccgta
ccctcaagctcaagctcaactatcactccgaacacccgaaccccaacctcacccccaagt
tcaacctccctaccacgtacccaatctttcctcgcatactacacctcaacaacaccggac
tctccgcataaacgcgcgcggcttaaaacgattttggtgctctccctgtcggagctttat
gatcctgacgctgtgagacgaaggttggatgaggctggggagaaggagaggggggtgttg
gtttttgagagggctttgttggagggtaagacacaaaatcaccgcgcagcgctcgagtta
ctcgtacacgaattacaagacccaatatcggcagaggcatactgtacacttggaggcgag
gtggtgtcagaacggacgttgaggagtgcggcggagagtgcggggcttgtgggtgttgcg
atgtttgctgctgctttctcaagtgcgtcgccgatacagagggaaaggagtgggcagggg
ggcaagctgcaaagccaaacggggatgaggaagatacaagccccgtcggtgattacaaga
cagaagacggtggacgaggggttgaagaaggagcttttgaaggttcttttggaggtgtat
atggatggagatgatcaggtcaactcggaacgagcaacgcacctgctcaactcacaggct
gttaatcttgatgttgtggatgtcatcgaactagtcccaccactctggcccgtcaacagt
atggcctccttcctcgtgcggtcgttccggcggacgcaacacacgttgttggagggcaaa
attgtcaaaaatataagtgtggggcagaacctagaggtgaaagatagatcatggaaaatc
ctacaagacgagggcgctgttattgaggaagccgatccggaggatgagctggaggacggg
gagacagagggggagaaaggggtattgagcgagaaaattgcagaggcgcgtggggttgtg
catgcgctgaggttgtctgtgaatgggagtggggatggcgagggggaaaagagaaattta
cgggggttggtggatgatgctgggggtggggaggtgggcggtgatgaacttgtatga
DBGET
integrated database retrieval system