Laccaria bicolor: LACBIDRAFT_307361
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Entry
LACBIDRAFT_307361 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
lbc
Laccaria bicolor
Pathway
lbc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LACBIDRAFT_307361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lbc03009
]
LACBIDRAFT_307361
Ribosome biogenesis [BR:
lbc03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
LACBIDRAFT_307361
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_DCAF4
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_WDR35_2nd
Beta-prop_VPS8
Utp12
Motif
Other DBs
NCBI-GeneID:
6081724
NCBI-ProteinID:
XP_001886090
JGI:
307361
UniProt:
B0DPY3
LinkDB
All DBs
AA seq
957 aa
AA seq
DB search
MAATPMIVDSDSASPPPRKRIRQDPVASRKTPKEPRLFFPFRALGLITNHVPFVLQTRSH
KGATDGPRIHLLTCLGRSWALWEGGKMTLLFVGPDASEHISSMAMDGDGVWVASGPHVIK
YIRGKEVLRATNPLDTSLVFITIFGPHILALTEAGDRMMVWDTTEGEMRSTIQFDQDFAA
TSILHPATYLNKVLVASSQGTMQLWNTLSQTCIYKFTSAKLLSSPNVPVPGAELGCAITA
LTQSPAIDVVGIGFTSGEISVYDIRADERLMRMFMEGGIRSLGFRSDGNHILASASSAGH
IALWDLNAGGRLLHMIRGAHDGAITSVEWVPGQPVLITSGEDNSVKQWLVESPTSPPRLL
KFRSGHHAPPHLIRYYGDDGKQLLTASRDRSLRCTSVVRDSRSFELSQGSLAKKATNLSI
PLASLKFPPITSLSYSSARAKDWDDIVTAHTDETFARTWTMQNKKLGKYSFGFAEAATVK
GKGKERAPLGSVKAVCVTACGNFGIASSSTGEIHMWNMQSGIRRKTYKLGSCPPEVAGRL
HSTKTKRRSVTGLATDSLNSTVIASTMDGTINFFDFQTTKLEHTLILPSTAVSILLHRDS
GLLAVVCDDMVVRVVDIETRKVVRELGGFRGRVLDITFSPDSRWIITTSLDSIIRTFDVP
TGRLIDAFKTATLATSMAFSPANDFLATAHVDSVGVYLWANRAQYAEVSFHSVGDDEIAE
VALPSMQGTAEEEALQALSDLTVEDAPVDVFSTPPQLDGELITLTLLPRSRWQTLLNIEV
IQQRNKPKEPPKAPEKAPFFLPTLPGVETRFAPPPKESEKEKKSTRRLDKTFAETESIFY
QKLEADDAQGDYETFFNYAKTLSPAAIDLELRSLVSVDNLKLFLNALTQRLLSHRDFEAV
ETFQNVFLKMHADVMTENPELRPSLERMLQVQKKETERVLELIASSIGTLGFVRDTL
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaacaccaatgatcgtggattctgatagcgcaagtccacccccacgaaaaagg
attcgtcaagatccagtcgcgtcaagaaaaactcctaaagaaccccgactattttttcca
tttcgagcccttggtctaatcacgaaccatgtaccattcgtattgcaaacccgatcacac
aagggtgcgaccgatggtcctcgaatacaccttctgacctgcctagggagatcatgggct
ttgtgggaaggaggaaaaatgacacttctattcgtcggaccggatgcatcggaacatata
tctagtatggctatggatggagacggggtatgggttgcttcaggcccccatgtcataaaa
tacatacgcgggaaagaggttttacgtgctacaaatccattggatacatcgctggtcttt
ataacaatcttcggaccccacatcttagccttgaccgaagcgggagatcgaatgatggtg
tgggatactacggaaggagagatgcgttccaccattcaattcgatcaagatttcgccgca
acctcaattctccatcctgccacttacctgaacaaagtgttggtggcaagcagccaaggg
accatgcaactttggaataccctctctcagacttgtatttacaagttcacctccgccaaa
ttactatcgtctccaaacgtacctgttcctggcgccgaacttggttgcgccataacagct
ctaacccaatcgccagccattgacgtcgttggtattggttttacctctggtgaaatttcg
gtttacgatattcgtgccgatgagcgcctcatgcgcatgttcatggaaggcggcatcagg
tcgttaggtttccgaagtgatggtaaccatatcctcgcgtctgcctcttctgctgggcat
attgccctctgggatctgaatgctggagggcgactacttcacatgattagaggtgcccat
gatggagctatcacatctgtcgaatgggtgccgggacaacctgtcttgatcacctccggc
gaagataacagcgtaaagcaatggcttgttgagtcccccacttccccgccaagattgctc
aagttccggtcaggccaccacgctcctccccaccttatccgatattatggtgacgatggc
aaacaactcctgacggcttcaagggatcgcagccttcgttgcacctccgtcgtcagggat
tcacggtcgttcgagttgtcgcaaggatcccttgctaaaaaggcgacaaatctgtccatt
cccctggcttcgctcaagtttcctccgataacgtcgctttcatactcatcagcgagggcg
aaagactgggacgatatcgtgactgcccacacggacgagaccttcgctcgcacctggacg
atgcaaaacaaaaaacttggcaagtatagttttgggttcgcagaagctgcgaccgtgaag
ggaaagggtaaagaacgagctccgttaggttccgtcaaagcagtgtgtgtaacagcttgt
gggaactttggcatagccagctcctcgactggcgagatacacatgtggaatatgcagtcc
ggcatccgacgtaagacctacaagttgggatcatgtcctcccgaagttgctggcaggtta
cattcgacaaaaaccaagcggcgttctgtgacggggctggccacggattctttgaactcc
accgttattgcgagcactatggatggaacgatcaacttctttgatttccagacaacaaaa
ctcgaacatactctgattcttccttcgacggctgtgtcaatattactacatcgtgacagt
ggtttactggctgtcgtatgcgacgacatggtcgttcgggtggttgatattgagacaaga
aaggtggtcagagagttgggcggcttccgtggtcgtgtcctcgacatcacattctcgccc
gattcacggtggataattacgacatcgttggattccatcattcggactttcgatgtgcct
accggacgcttgatcgacgccttcaaaacggcgactcttgctacaagcatggctttctcg
cctgctaacgactttttggcgacagctcacgttgacagcgttggcgtgtatctttgggca
aatcgtgctcaatacgccgaggtctcgttccacagtgttggggatgacgaaatcgctgaa
gtggcactcccttcaatgcaaggcacggcagaagaggaggctctccaggctctctctgat
ttgactgtggaagacgcccctgtcgatgtgttctccactcctcctcaacttgacggagag
ttgatcacgctcacgctgctccctcgttcgcgctggcaaacgctcctgaatatagaagtc
atacagcaacgcaacaaacccaaagagccacccaaagctcctgagaaagctccattcttt
ttgcctactctacccggtgtcgagacacgctttgcgcctccaccgaaggaaagcgaaaag
gagaagaagagcacgcgacgattagacaagacgtttgcggagacggagagtatattttac
caaaaactggaggcggacgacgcacaaggagactacgaaacatttttcaactacgccaaa
actctatcaccagccgcgatcgacttagagctgagatctctcgtatccgtggacaatctc
aaactgttcctcaacgccctcacacaacgtcttctctcgcatcgagatttcgaagcggtg
gaaacgttccaaaatgtatttttgaagatgcatgcggatgttatgaccgaaaatccggag
ctgcgaccgagtttggagaggatgttgcaggtgcagaaaaaagagacagagcgggtgttg
gaattgattgcgtcgtcgatcgggacgttaggttttgtgagggacactttgtag
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