Laccaria bicolor: LACBIDRAFT_310264
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Entry
LACBIDRAFT_310264 CDS
T01044
Symbol
SNT16202
Name
(RefSeq) histone deacetylase complex, SIN3 component
KO
K11644
paired amphipathic helix protein Sin3a
Organism
lbc
Laccaria bicolor
Pathway
lbc04139
Mitophagy - yeast
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04139 Mitophagy - yeast
LACBIDRAFT_310264 (SNT16202)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lbc03036
]
LACBIDRAFT_310264 (SNT16202)
Chromosome and associated proteins [BR:
lbc03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
LACBIDRAFT_310264 (SNT16202)
REST complex
LACBIDRAFT_310264 (SNT16202)
Heterochromatin formation proteins
Other heterochromatin formation proteins
LACBIDRAFT_310264 (SNT16202)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
RNR-II_ins_dom
YcaO_C
Motif
Other DBs
NCBI-GeneID:
6082948
NCBI-ProteinID:
XP_001887363
JGI:
310264
UniProt:
B0DTU5
LinkDB
All DBs
AA seq
1239 aa
AA seq
DB search
MDVDLPPPSAPSTDVENPFATRPSDVDTSSTAATVQAVDVRNPSPNPDAIEPMNEEAAGK
PVSPQLSNIHLPSVSEPVAPMLVDDLEQPGTQRSRRTSPVDPQSYSLDRPLNVTDALSYL
DAVKVQFSDQPDVYNHFLDIMKEFKNEQIDTPGVIKRVSHLFNGHPSLIQGFNTFLPVGY
RIECSTDAHDSNFITVTTPSGTTMQTTNNGLGKGPIFWSTSPTSGGLWRREGGIDYAVEH
VTSPDPRSYGIDGQAIEPAVQYVQKIKQRCDPDTYRQFLDILSRYHHKSDIIDEEEVSRQ
IAKLFKDAPDLRADFRVFMPDRSQQLMDDGPTHPRPGTPLDKNRRKLDIVANSSSSALPQ
KRKRKVPEKEKEKEPVVTKAAPPAKKPKHSNSQDLTPLSYNPKHIIAGPSSPRRTVPHNQ
PPPVPMRAPPVNDDTHFFDRVKRALDNGDIYNEFLKVVNLFAQDYIDTARLVKESRNFLG
EGELMKQFKEILGWDERKEKEHFLAEQQSQSNWKKPAVTDLQQRPGRIDLGEKYGSYRKV
SEKEANVPCSGRDDMCRSVLNDEWISHPTWSSEDPPIIPHKKNIYEEALHRSEEERHEYD
FHIEAIVRTITMLEPISNKIAQMNVEDRGNFKLKPNLGGSWKPIHQRVVKKIYGREAGLE
VMQAMQDTPALAIPVVLQRLKQKEEEWKRAQREWNKIWREVDARNYSKSLDHQAIDFKAA
DKKAMMSKSFVSQIEAAREEQMDKRASLIDPLFARTRPRHQLQFIIDDVQILQDSMKLTF
SFLDRTQGQINLTDRKRIEGFLRTFIPIFFTLDPVAFNSAFVVVQETPESDLSDADAASN
VDDAEVSSNGTSSPRTGRGRKTANGLSSGSDLRKKLLKSEQAKSTSRKTRAQEAPTPSAS
RLASPVIVEEEPKGDPSARRLPRQNIFFSNTVFYTLLRLIEMLYSRLHLFKDLAAEIAAQ
DPKTRRLNHVGKTDRLQNGETPRAQHYYELMLESCERLFDNELEQHAFEDQMRGMFGTKN
AYQLFTIDKLIGAIVKQVQAVFLDPKSQDLLEILKRERSLNSPTTQDQINSRRNAEKVLG
PDENLFRIDWLSDSKTITVQLIGKDDSSFDDSEVLSGRWQAYLDSFVASETTPGISQTRI
KRPFLRRLAHPRSSLSSKLTNCLDRNIPAAVRDTPPDVSTQDGLEIKVCVRTYRLFYVSK
TEDFLWKYRSKEEMEKNSLRLKPRNALRRKWIEPAKAKS
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcgacctgcctccaccttcggcaccctcgaccgacgtagagaacccttttgcc
acaagaccctccgatgttgatacctcaagtacagctgccaccgtgcaagccgtggatgtc
aggaacccctcccccaatccagacgctattgagccaatgaacgaagaggctgcagggaaa
ccggtatctccacagctttcgaatatccaccttccttcagtatccgaaccagtcgcgcct
atgctcgttgacgatctggaacaacccggcactcagcggtccaggagaacatcaccagtc
gaccctcagagctactcgctagatcgtccacttaacgtgacagacgctctcagctatctt
gatgctgtcaaggttcaattttccgaccaacccgatgtctacaatcacttcttggatata
atgaaggagttcaaaaatgagcaaattgacactcccggcgttatcaagcgcgtttcccat
ctattcaacggacatccgtcccttattcaaggcttcaatacctttcttcctgtggggtat
cgcatcgaatgctcgacagacgcacacgattccaactttattacagtcaccactcctagt
ggtaccacaatgcagactacgaataacggactgggaaaagggcccatcttttggtcaacc
tcaccgacttcaggaggtctgtggcgccgggagggtgggattgactacgccgtggaacat
gtgacgtcgccggaccccaggtcgtatggtatcgatggacaagccattgagcctgctgtc
caatacgtccagaaaatcaaacaacgctgtgatccagatacgtatcgacaatttttggac
attctctcccgttatcaccacaaatcagacataattgatgaggaagaggtttcacgccaa
atcgcaaaacttttcaaggacgctcctgacctcagagccgattttcgtgttttcatgccg
gatagaagccaacagttgatggatgacggccccacgcatccgcggcctgggaccccttta
gataagaatagacgcaagttggatattgtcgcaaattcatcgagctcagcattgccacag
aagagaaaacggaaagtccctgaaaaggagaaagagaaagagccggttgtaacaaaggca
gcgccccctgcgaaaaaacccaaacattccaactcgcaagatttgaccccgctgtcatac
aatcccaagcacatcattgccggcccatcctcgccccgtcgaaccgttccccacaaccaa
ccacccccagtacctatgcgagcgcctccagtcaatgacgatacacacttctttgaccgt
gtcaagagggcattggataacggagatatatacaacgagttcctcaaggttgttaatttg
tttgcgcaagactacatcgatacagcaaggctggtcaaggagagccggaatttccttggg
gaaggcgagttgatgaaacagttcaaagaaattcttggctgggatgagaggaaagaaaag
gaacacttcttggcagaacagcagtcgcagagcaattggaagaaacccgcagttaccgat
ctacaacaacgacctggacgcattgacttgggcgagaagtatggaagctatcgcaaggtt
tctgaaaaagaagcaaacgtgccatgctcaggtcgcgatgatatgtgccgttcggttctg
aatgacgaatggatttcgcatcctacttggtcaagtgaagacccacccatcattcctcat
aaaaagaacatctacgaagaagccctacatcgaagcgaagaggaacgtcatgaatacgat
ttccacattgaagcgatcgtgcggactattacgatgctcgagcctatcagtaataaaatc
gcacagatgaacgtagaggatcgtgggaacttcaagctgaaaccgaatctgggtggatca
tggaaaccgatccaccaacgcgtagtgaagaagatatatggcagggaagccggtttggag
gtaatgcaagctatgcaagacacccctgcgttggcgatccctgtggtgttgcaacgtttg
aagcagaaggaagaggagtggaagcgagcgcagcgagagtggaataagatttggcgagag
gtggatgcgcggaattattccaagagtctggatcatcaagctattgatttcaaggcggcg
gataagaaagctatgatgtccaagtcgttcgtgagccagattgaggctgcgagggaggag
cagatggacaagcgggcttctttgattgaccctttgttcgcgaggacgaggccgagacat
caactgcagtttatcatagatgacgttcagattcttcaagactcgatgaagttgactttt
tctttcctcgatcggactcagggacaaatcaacttgacggatcgcaagcgcatcgaaggg
tttctccggactttcattccgatatttttcacccttgatcctgttgcgtttaactctgcg
tttgtcgttgtgcaagagacgccggagagtgatctcagtgatgcagatgctgccagcaac
gtagatgacgcagaggtatccagcaatggcacgagcagccccaggacgggtcgaggtcgg
aaaacagccaatgggttatcgtcaggcagcgatctacgaaagaaattgctgaagagcgaa
caagcaaagtcaaccagccgaaagaccagggctcaggaagcccctacaccttctgcatcg
cgtctagcttcccctgtaattgttgaggaagagccgaagggtgacccgtctgctcggcgg
ctaccgaggcagaacatcttcttctcaaataccgttttttataccctgctgcgtttgatt
gagatgctttattctagactacacctgttcaaagacctcgctgccgaaattgctgcgcaa
gatcccaaaactcgaagactgaatcacgtcgggaaaacagaccgcctgcaaaatggcgaa
actccccgcgctcagcattactacgaactgatgcttgagtcatgcgagcggttgtttgat
aatgaactcgaacagcatgcttttgaggaccagatgaggggcatgtttggaactaagaat
gcctatcagctgtttacgatcgacaagctaattggggcgatcgttaagcaggtgcaagcc
gtgttcttagatccgaagagtcaagatcttcttgagattctgaaacgagagcggtcgctc
aactctccgaccactcaagaccaaataaacagccgacgcaacgccgagaaggttcttgga
cctgatgagaacctattccgtatcgactggctttcggattcaaagacgatcactgttcag
ctgattggcaaggatgattcaagctttgatgactcggaagtactgtcgggtcgttggcag
gcttatcttgactcatttgttgcgtccgagactacgccgggtatctctcagaccaggatt
aagcgccctttcctgagaaggttagcacatccaagatcatccctgagctcaaagttgacg
aattgtcttgacagaaacatccctgctgccgttcgagacacccctccagacgtctcaaca
caagatggccttgagataaaggtctgcgtgcgaacatatcgactgttctatgtgtcaaaa
acggaagacttcctgtggaagtataggagcaaagaggagatggagaagaactccctgcgt
ttgaaacctaggaacgccctacggagaaaatggatagagccagcgaaggcaaagtcgtga
DBGET
integrated database retrieval system
