Laccaria bicolor: LACBIDRAFT_313557
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Entry
LACBIDRAFT_313557 CDS
T01044
Symbol
CHR16205
Name
(RefSeq) DNA repair protein, SNF2 family DNA-dependent ATPase
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
lbc
Laccaria bicolor
Pathway
lbc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LACBIDRAFT_313557 (CHR16205)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbc03400
]
LACBIDRAFT_313557 (CHR16205)
DNA repair and recombination proteins [BR:
lbc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
LACBIDRAFT_313557 (CHR16205)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
6073544
NCBI-ProteinID:
XP_001877687
JGI:
313557
UniProt:
B0D094
LinkDB
All DBs
AA seq
1051 aa
AA seq
DB search
MPPFQELRPPKRKLVDDELSSRKRFTTGLGLAAASTSVDEELVWMVQWRNRQYKKHKTWD
GDAILVVNRSKCTLFDSEGKIMSTGKAEAPLFEGKSFFVGAKEVELDRPVLRTEFLSGQC
FGRHNSIQGRDAFETQNDLAHVKKFVSPVVMKKPLEGAPPGVRAGCLKSENGPPQNFDGV
ASNVRKSYWTANWRKQQNKKHKTWDGDAYISHEGDKLTMISEDGKIMGSTAWKGELLCAG
YSAYISGKEFQLDCEISRSQLPDMKEISLPEESTSHVEDPLHFSGQGSTTNPSVAHEFIS
PASFYAIPKSKPKGPLHDPDAADAVVMKFPSKEHTKSNLNVVPVVLDPILSRRMRPHQKE
GWLTGVSSVRLYSEQLSQGVMFLYECVMGLRKHEGQGCILADEMGLGKTLQTIALIWTLL
KQNLYGSKEPAAKKVLIVCPVSLTTNWKAEFNKWLGKDRVGVVICEKDKSRVNQFFYNKN
QHVLVIGYERLRTVIDTLSSGVSVPAIDLIVCDEGHRLKSANNKTTAILKALRTPRRVIL
SGTPIQNDLGEFHAMAEFCNPGLLDDYNVFRRVYESPILKSRAPDASAKEIEIGETRTAQ
LLSISNSFVLRRDATLLKNHLPPKYEYVVFVTPTALQLSMFSKILRPDRLIDLVQSSTAE
SLALINILTKISNSPILLKAAADKAKIKTSGDAPYILRTGVDEALGLLPDTTHFGDFSLS
GKLIALAKLLTIIRHTTEEKCVLVSHYTSTLNILEAFCQKKGYSYYRLDGQTPQVKRQEY
VNAFNNVSQRSSFIFLLSSKAGGLGINLIGASRLCLIDSDWNPRLVGRRTQLTPTLISDS
HDLQSMARCHRDGQKRPVFIYRFLTTGAIDEKIYQRQVTKLGLSASLIGSAGSSSASKTD
SFSRKEVHIQLQFHFKNSTDVQLRDIFRIHPDTICNTHDLLECQCEESGGRPSDTCEEVQ
PVDPNTEDNVLERGFIAASNVKMDASDPVDTAKKKAALALLSEWKHINCQRSGCHDLIHD
HALRKLVQEGEEAGGSISFLFEKGSESSEEE
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccttccaagaactccggcctcccaaaaggaaattggtcgacgatgaactttcg
agcaggaagcgatttaccacaggtctaggcttagctgccgcctccacctcagtagacgaa
gaactagtatggatggtacaatggagaaaccgtcaatacaagaagcataaaacatgggat
ggtgatgctattcttgttgtcaaccgtagtaaatgcaccctatttgactctgaaggcaaa
atcatgtccactggcaaagccgaagcacccctattcgaaggaaagagcttttttgttggc
gccaaagaggttgaactggatcggcccgttctaaggacggagtttctttcaggtcaatgc
tttggccggcacaatagcattcaaggacgtgatgcgtttgaaactcaaaacgatttggct
cacgtgaagaaatttgtttctcccgtcgtgatgaagaagccattagaaggggcgccccct
ggcgtccgcgcaggatgtctgaaatcagagaatgggcccccacagaatttcgatggagtg
gcttcgaacgttcgaaagtcttactggactgccaattggaggaaacaacaaaacaaaaag
cataaaacttgggacggagacgcatatatatcgcatgaaggcgacaagttgacgatgata
agtgaagatggtaaaatcatgggaagcaccgcttggaagggagagctcctctgcgcgggc
tacagtgcatatattagcgggaaggaattccaacttgattgcgaaatttctaggtcgcag
cttcccgacatgaaagagatcagtctgcctgaagagtcaacctcccatgtcgaagatccc
ctacattttagcggtcaagggtcgacgacgaacccatccgttgctcatgagtttatttcc
cctgcgtctttctatgcaataccaaaatctaagcccaaaggcccactgcacgatcccgat
gccgctgatgccgttgttatgaaattcccaagtaaagaacatacgaaaagcaatctcaat
gtcgtgcctgttgttttggaccccatactctcacggcgaatgaggccacaccagaaagaa
ggttggctaaccggtgtttcgtcggtcaggctctattctgaacaactctcacaaggtgtc
atgtttctgtatgagtgtgttatgggcctgaggaagcatgaaggtcaaggttgtattctc
gccgatgagatgggtctcgggaagacgttacaaacgatcgccttgatctggacattgctc
aaacaaaatttatatggtagcaaagagccagcagccaagaaagttcttatcgtgtgtcct
gtgtccttgactaccaattggaaggccgagttcaataaatggcttggaaaagatcgtgtc
ggggtcgtgatctgcgagaaagacaaaagccgcgtcaaccaatttttttacaacaaaaac
cagcatgttttggtcatcggttacgagcggcttcgaacagttatagacactctttcgtca
ggcgtgtccgtcccagcgattgacttgattgtatgcgatgaaggtcataggttaaagtcc
gctaacaacaagacgactgctatactcaaagctcttcgaactcctcgacgcgtcatcctc
tcaggtaccccgattcagaatgatcttggagaattccatgcgatggctgaattttgtaac
cccggcttgcttgatgattacaatgttttccgtcgagtttatgagtcgccaatcttgaag
agtcgagctccagatgcctctgcaaaagagatcgagattggcgagacacgcacagctcag
ttgctttcgatttccaacagttttgttctcaggagagacgccacccttctcaaaaaccat
cttcctcccaaatatgaatacgtggtttttgtcaccccaactgccctccaattatctatg
ttctcaaaaatcctccggcctgacaggctgattgatcttgtgcagagctcaacagcagag
tctcttgctttaataaacattttgacgaaaatcagcaatagtccaatattattgaaagcg
gcggcggataaggccaagatcaagacaagcggtgatgctccgtacatcctaagaactgga
gttgacgaagcattggggttactcccggacaccactcattttggggacttttcattgagc
gggaagcttatcgctcttgcaaagttattgaccatcatccgccacaccactgaagaaaaa
tgcgtcctggtttctcattatacatcgacgctgaacatactagaggccttctgtcagaaa
aagggttattcgtattaccgattagatgggcaaactccgcaagtcaagagacaagaatac
gttaacgctttcaacaacgtgtctcaaagaagtagcttcatatttctactcagctcaaaa
gctggagggcttggaatcaatctcattggtgcttcaagactttgcttgatagactccgac
tggaatcccaggttagttggacggcgaacacaattgacaccgacgctgatttcagacagt
cacgatttgcaatctatggcgagatgccaccgggatggacaaaaacgacccgtgttcata
taccggttcctgacaactggtgcaatcgacgaaaaaatctatcaaagacaagtcactaaa
ctcggattgagcgcatctctcattggatcggcgggctcgtcgtccgcatctaaaactgat
tcattttctcgcaaagaggtacatatacagctccagtttcatttcaaaaattcaaccgat
gtacagctccgggatatctttcgcatccatcctgacaccatatgcaacacgcatgacttg
ctcgagtgccaatgcgaagagtcgggtggccgcccctcggatacttgcgaagaagtacaa
cctgtggaccccaacacggaggataatgtgttggagaggggatttattgcagcatcgaat
gtgaaaatggacgcgtcagaccctgtggacacagcgaagaagaaagctgctttggcgttg
ctgagcgaatggaagcatatcaattgtcagagatctgggtgtcacgacctcattcacgac
catgctcttcgcaaacttgtgcaggagggagaggaggcaggcggaagtatatcatttctg
tttgagaaagggagcgaatcatcagaagaggagtga
DBGET
integrated database retrieval system
