Laccaria bicolor: LACBIDRAFT_313773
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Entry
LACBIDRAFT_313773 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
lbc
Laccaria bicolor
Pathway
lbc03022
Basal transcription factors
lbc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
LACBIDRAFT_313773
09124 Replication and repair
03420 Nucleotide excision repair
LACBIDRAFT_313773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbc03021
]
LACBIDRAFT_313773
03400 DNA repair and recombination proteins [BR:
lbc03400
]
LACBIDRAFT_313773
Transcription machinery [BR:
lbc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
LACBIDRAFT_313773
DNA repair and recombination proteins [BR:
lbc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
LACBIDRAFT_313773
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
6073352
NCBI-ProteinID:
XP_001877416
JGI:
313773
UniProt:
B0D0T4
LinkDB
All DBs
AA seq
595 aa
AA seq
DB search
MPTTVCKAKASFKKLSGLLELTDTHLQWTQDGKKAPSVRVPYAEAYSLFCSKEGASQVRL
KLGLISDEAGHNFTFTSPIANAEREEFKKALTPIITRNKLPAAPVNRPPVTAAALVPNGP
LPVVPKAPLHQPIAPSRPPASRATSVLSERRTTPVIAGTDPASDFRLRKRVLMSNHELGS
LHKDLVMSGQITEAEFWDGREHLLLAQADTESQRKGKPGQLVDPRPETVDGEIKIKITPQ
LVHDIFDEYPVVAKAYSEHVPKNLSEEQFWRRYFQSKLFNTHRASIRSSATQHVVKADPI
FDKYLEREDDELEPRRQRSDPVELFVNLGATLEDHGETGNEKDVTMRAGRQKGALPLIRK
FNEHSERLLNSALGEIPSKRRRLDVGEDAYSEIDIEDLHDPEASTGIILEMKGYRERYYE
GRMSKPAAEEVAAEKSVDFRTVVREAKADLQEWDKQLTQLKIDRKSGDSALLAMTQNVSV
RLDVKSKKNDIPDVLFRQLTTCQTAANEFLRQFWSASYPPLSEVPSVSTATPAQRAAKAT
KMIGYLSKTHEKVQALVQSASMHSVEPARVEMAMKPVLNAVDHALAFHQSRTRPK
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccacggtgtgtaaggccaaggcgtctttcaagaaattgtcaggcttgctcgag
ctcaccgacacccatctccaatggactcaggacgggaaaaaggcgccttcagtacgcgtt
ccttacgctgaagcatattctttgttctgtagtaaagagggcgcctctcaggtcaggctc
aagcttggtcttattagcgatgaagcgggtcacaactttactttcacgtcccccatcgca
aacgccgagcgtgaagagttcaaaaaggcactcactcccattataactcgcaataagcta
cctgccgcgcctgttaatcgacctcctgtgacggctgcagccctagtgcccaatggacca
ttgcctgtggtacctaaagcacccctccatcaaccgatagcgccctcgcggccccccgcc
tcccgtgccacatctgtcttgagtgagaggagaacgaccccggtcatcgctggaaccgac
cctgccagcgatttccgacttcgcaagagggttcttatgagcaatcatgaactcgggtcc
ctgcacaaagatcttgtcatgagtggtcaaattacagaagctgagttctgggacggccgt
gagcaccttcttcttgcacaagctgatacagaaagtcaacgaaaaggcaagccgggccag
cttgtggaccctcgtcctgaaactgtcgacggtgaaatcaagataaagattacgccgcag
ctggttcacgatatatttgatgaatatcccgtcgtagcgaaggcttacagcgagcatgta
cccaagaacttgtctgaagaacaattttggagacggtattttcaatccaaactcttcaat
acacaccgtgcatctattcgttcgtctgcaacccagcatgttgtcaaagccgaccccatt
ttcgacaagtatctggaaagggaagatgacgagctggaacctaggcggcaacgttcggac
ccagtggagcttttcgtcaaccttggcgcaactttagaggaccatggagagactggaaac
gaaaaggatgtcactatgcgagcaggccggcaaaagggtgctttgcctctcattcgaaag
tttaacgagcactctgaaaggcttctgaactcagccctgggcgaaattccttcaaagcga
cgtcgtctggatgtaggagaagatgcatactcagaaatagacatcgaggatttacacgac
cccgaggcttcaactggcatcattcttgagatgaagggatatagagaacgatactatgaa
ggtcgcatgtcgaaacccgccgccgaggaagttgcagctgagaagagtgtagacttcagg
accgttgttcgcgaagcaaaagctgacctgcaagaatgggataaacagttgactcaacta
aaaattgatcggaaatctggtgactccgctttgcttgctatgacgcagaacgtctcggta
agattggatgtaaagtcaaaaaaaaacgatataccagacgtccttttcagacaattgaca
acttgtcaaactgccgccaatgaatttctccggcaattctggtccgcctcgtatcctcca
ctttctgaggtacccagcgtgtccacggctacacctgcgcagcgggcagcaaaggccaca
aaaatgataggctacctttcaaaaacgcacgaaaaggtgcaggccctcgtacagagtgca
agtatgcactctgttgagccagcgcgtgttgaaatggctatgaagcccgttctcaatgcg
gttgaccacgccctcgcctttcatcaaagcagaactcgccccaaatag
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