KEGG   Laccaria bicolor: LACBIDRAFT_313788
Entry
LACBIDRAFT_313788 CDS       T01044                                 
Name
(RefSeq) hypothetical protein
  KO
K03143  transcription initiation factor TFIIH subunit 3
Organism
lbc  Laccaria bicolor
Pathway
lbc03022  Basal transcription factors
lbc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lbc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    LACBIDRAFT_313788
  09124 Replication and repair
   03420 Nucleotide excision repair
    LACBIDRAFT_313788
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lbc03021]
    LACBIDRAFT_313788
   03400 DNA repair and recombination proteins [BR:lbc03400]
    LACBIDRAFT_313788
Transcription machinery [BR:lbc03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     LACBIDRAFT_313788
DNA repair and recombination proteins [BR:lbc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     LACBIDRAFT_313788
SSDB
Motif
Pfam: Tfb4
Other DBs
NCBI-GeneID: 6073111
NCBI-ProteinID: XP_001877780
JGI: 313788
UniProt: B0D0U6
LinkDB
AA seq 360 aa
MDLSDAPQLSDASHLSVVLDLSPTQWHLSGLLSNKYPLSLNSFLSHVLAFLNAHLASQHE
NTLAVFGAFPGKSLMLYSSTLHNPELQSIDSNSYAPFKLVDSTIINRISDELDAIDQSEE
EAPCALVGALTKALCYVNRISLPPPSNSSTSPNTRDSTVLPDPRILILSVSPDLSTSYIP
IMNSIFSAQKLKVTIDACQVYGPDAVFLQQAAHLTGGSYLFLERRDALLQYLIMSFLSAP
SIRQVLAVPTQDRIDFRAACFCHKNIIDIGFVCSVCLSIFCQPVPVCSTCRTKFPIKTLQ
RLNASRPNVPSLSKSGPPSVVGTPQSRTPASTRNLPFPGEQPLSTTPGNGNTPATNGSNH
NT seq 1083 nt   +upstreamnt  +downstreamnt
atggatctctccgatgccccccagttatccgatgcctcacatctctccgtcgtcctcgac
ctttctccaacccaatggcatctctcaggtttattatcaaataaatatccactctctctc
aactcttttttgtctcatgtcctcgcttttctcaacgctcacttggcttcccaacatgaa
aacaccctcgccgtctttggcgcatttccaggcaagagcctgatgctctattcatccaca
cttcacaaccccgagctccaatccatcgattcaaactcatatgcaccattcaaactagta
gattccaccatcataaaccgcatttccgacgagctggacgccattgatcaatccgaagaa
gaagccccgtgtgcactcgtcggtgcgttgaccaaagcattgtgctatgtgaacagaata
tccttgccacccccatccaactcttcgacttcgccaaacacacgtgattcgactgttctg
ccagatccaaggatcctgatcttatccgtttcccccgatctatccacctcttacattcct
atcatgaactcaatcttttccgcgcagaaacttaaagtcactatcgatgcctgtcaagtt
tatggtcctgatgctgtctttctgcagcaggccgcccatctaaccggtggttcctacctc
ttcctggaacggagagatgctctcctccaataccttatcatgtctttcttgtcggccccc
tcaatccgccaagtccttgctgtgccaacccaagaccgaatagacttccgtgcagcatgc
ttttgtcataaaaacatcattgacattggctttgtgtgctccgtctgtttatccattttc
tgtcaacctgtgcctgtttgctcaacgtgccggacaaaattccccatcaagactctccag
cgtctcaatgcgtcccgtccaaacgtgccatcattgagtaagtcaggacccccgtcagtg
gtgggcacaccccaaagtcgtacgccagcgtctacacggaacttgcctttccctggagaa
caacctctcagcacaacacccggaaatgggaatacaccagcaaccaacggctcaaaccat
tga

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