Laccaria bicolor: LACBIDRAFT_313788
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Entry
LACBIDRAFT_313788 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
lbc
Laccaria bicolor
Pathway
lbc03022
Basal transcription factors
lbc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
LACBIDRAFT_313788
09124 Replication and repair
03420 Nucleotide excision repair
LACBIDRAFT_313788
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbc03021
]
LACBIDRAFT_313788
03400 DNA repair and recombination proteins [BR:
lbc03400
]
LACBIDRAFT_313788
Transcription machinery [BR:
lbc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
LACBIDRAFT_313788
DNA repair and recombination proteins [BR:
lbc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
LACBIDRAFT_313788
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
6073111
NCBI-ProteinID:
XP_001877780
JGI:
313788
UniProt:
B0D0U6
LinkDB
All DBs
AA seq
360 aa
AA seq
DB search
MDLSDAPQLSDASHLSVVLDLSPTQWHLSGLLSNKYPLSLNSFLSHVLAFLNAHLASQHE
NTLAVFGAFPGKSLMLYSSTLHNPELQSIDSNSYAPFKLVDSTIINRISDELDAIDQSEE
EAPCALVGALTKALCYVNRISLPPPSNSSTSPNTRDSTVLPDPRILILSVSPDLSTSYIP
IMNSIFSAQKLKVTIDACQVYGPDAVFLQQAAHLTGGSYLFLERRDALLQYLIMSFLSAP
SIRQVLAVPTQDRIDFRAACFCHKNIIDIGFVCSVCLSIFCQPVPVCSTCRTKFPIKTLQ
RLNASRPNVPSLSKSGPPSVVGTPQSRTPASTRNLPFPGEQPLSTTPGNGNTPATNGSNH
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggatctctccgatgccccccagttatccgatgcctcacatctctccgtcgtcctcgac
ctttctccaacccaatggcatctctcaggtttattatcaaataaatatccactctctctc
aactcttttttgtctcatgtcctcgcttttctcaacgctcacttggcttcccaacatgaa
aacaccctcgccgtctttggcgcatttccaggcaagagcctgatgctctattcatccaca
cttcacaaccccgagctccaatccatcgattcaaactcatatgcaccattcaaactagta
gattccaccatcataaaccgcatttccgacgagctggacgccattgatcaatccgaagaa
gaagccccgtgtgcactcgtcggtgcgttgaccaaagcattgtgctatgtgaacagaata
tccttgccacccccatccaactcttcgacttcgccaaacacacgtgattcgactgttctg
ccagatccaaggatcctgatcttatccgtttcccccgatctatccacctcttacattcct
atcatgaactcaatcttttccgcgcagaaacttaaagtcactatcgatgcctgtcaagtt
tatggtcctgatgctgtctttctgcagcaggccgcccatctaaccggtggttcctacctc
ttcctggaacggagagatgctctcctccaataccttatcatgtctttcttgtcggccccc
tcaatccgccaagtccttgctgtgccaacccaagaccgaatagacttccgtgcagcatgc
ttttgtcataaaaacatcattgacattggctttgtgtgctccgtctgtttatccattttc
tgtcaacctgtgcctgtttgctcaacgtgccggacaaaattccccatcaagactctccag
cgtctcaatgcgtcccgtccaaacgtgccatcattgagtaagtcaggacccccgtcagtg
gtgggcacaccccaaagtcgtacgccagcgtctacacggaacttgcctttccctggagaa
caacctctcagcacaacacccggaaatgggaatacaccagcaaccaacggctcaaaccat
tga
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