Laccaria bicolor: LACBIDRAFT_313827
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Entry
LACBIDRAFT_313827 CDS
T01044
Name
(RefSeq) rRNA processing protein RRP12
KO
K14794
ribosomal RNA-processing protein 12
Organism
lbc
Laccaria bicolor
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lbc03009
]
LACBIDRAFT_313827
Ribosome biogenesis [BR:
lbc03009
]
Eukaryotic type
90S particles
Other 90S particles
LACBIDRAFT_313827
Pre-60S particles
Other pre-60S particles
LACBIDRAFT_313827
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
MMS19_C
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
6073297
NCBI-ProteinID:
XP_001877428
JGI:
313827
UniProt:
B0D0X5
LinkDB
All DBs
AA seq
1239 aa
AA seq
DB search
MEEALAKIRPHTSSSLAHQKTPATLLIAIESTLREQKTDLTPTAYFAALLTTLDGSIQKK
DISLNDGDVLPAELYLLALVVPFVPLPVVRNNLNTLLSLTAPLFPSLNQHAPALRSQLSI
YLTIFHSLDRPLLETQGIRQTFASILQLSIDPRPKVRKKAADLVKDVLDNPPAPLARHPY
SDQVAAWLSSALLEANAGPFGKAKPGAESSLHVLALLRPLLPNLPSSALPSITKSLVSLP
RLGNVYLSQSAYSILSEILVLPLEDSASGVGEQLSDILKVILSSPPSKSDATLCAAWVQV
LGDATFAYSVVDSVSCSSELGKVWKSVWNFLDSSDPTTRKSAAKALDVLTRCFSPRLIES
AIADTNEASLIRKVISQVTKAMNSIAFARAMPELLTVVSALFLNLRYKPSKASPTAAEIL
LVPIVSQLGHMRIQKGFDFKEAADATLSAAMRVLGPEVVFKVLPLNLEPGVRQPGQEPRA
FLLPLISQPHPSPLGHFVSYFVPLSERMFDLQQTAATQGRQSEAKVWNVLVGQVWSGLSG
YCFETPDLKEALNPAFSQLLSQLLYSQSELRPAILKALRILVDSNLAISASDATQTSLAS
LTPQEAAANVVFLRTQVESWLAVLFNVFGSIGRDSRGMIGDVITAWASIGEEQEIHNAYD
KVVQLLKTNLAMCQKAPATTAIETNDAGNMTTTSQDILILLLPYLSPADSMSLFDLCLTP
EILNGRNNGIQKRGYKILTKLVDGGIVSVNAETVVRKLDEMVDGLTAAAKKDRFNLLALL
IPLLPPSAMHVIPTLIPEAILGTKEPSEKARGAAFEVILVMGRKMSSGGVVKRSMVDGMD
EDAVDAKASIEEFMTMVVGGLAGASPHMISATITAISRLVFEFKDSISPNMHSEIFMMLL
VFLSSANREIVKSVLGFIKLAIHTLPADLIRPHLKDLVPTLLNWSHDHKNHFKVKVRHIF
ERMLRRFSWDEVYSCAGEEEAAKVLVNIKKRKDRAKRKRANRADEDEDAKEPTFSKPAAG
DAFEDVLYGSESELDDDSEDDRPAPQVQSSKKKAVEYGARLRLDDDEPTDLLQGATSKIT
SSGPNRRRKPGQDAAHFKTDEDTGKMIIDADSDSGASSGAHATAEVAGSAYKESLTSVDG
FTRGPNGRIKFHKDTKKRRRENEGAEQDVEMADGEVQETGKAKKSKKTTEIKLGHEFKAK
KAGGDLKKGGVDPYAYLSLSQAAKKGGRGSGKIGITGKR
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggctcttgcaaaaattcgacctcacacatcgtcgtccttggctcatcaaaaa
acgccggcaacgctcctaattgcaatcgaatctaccttgcgcgagcaaaagacggatttg
acgccaactgcttacttcgctgctctcttgaccacccttgacgggtccatacagaagaaa
gacatctctctgaacgacggtgatgttttaccagcagagttgtatctattggctcttgtt
gtcccgtttgttccccttccagttgtccgcaacaaccttaatactctgctctctctcact
gctcccttatttccatccttgaatcaacatgctccagccttgcgatctcaactatctata
tatctcaccatcttccactctttggatcggccactcttggaaacgcagggcatccgacaa
acatttgcatctatcttacaactatctatagatccacggcccaaggtccgcaaaaaggca
gccgatctcgtaaaagatgtgcttgacaaccctcccgcaccgttagcacgacatccctac
tcggatcaggtcgctgcgtggttgagttctgctcttttggaagccaatgcaggtccgttt
ggaaaggccaagccaggtgcagaaagctcgctacacgttttagcacttctgcgacccctt
cttcccaatttgccatcttcggctctcccatccattaccaaatcccttgtttcgcttcca
cgtttaggcaacgtttatctctctcaatccgcatattccattctatctgaaatcttggta
ctccctctggaagacagtgcaagtggcgttggtgaacaattgtctgatatcttaaaagtc
attctctcttctccaccgtccaagtccgatgcaacactttgtgcagcttgggtccaagta
cttggcgatgctacgtttgcgtacagcgtggttgattctgtttcatgctcttcagagttg
ggaaaagtttggaaaagcgtatggaacttcttggactcttcagacccaacgacaagaaag
tcagcagcaaaagctctggatgttttaacccgatgtttttcgccacgccttatcgaatct
gccattgcagatactaatgaggcctctcttattagaaaagttatcagccaggtcacaaaa
gcaatgaattctatagcattcgctcgagccatgcctgaacttctcaccgttgtttcagcc
ttattcttgaacctccgttacaagccctccaaggcgtctcccactgctgccgaaatcctc
ctggtaccaattgttagtcaactaggtcacatgaggattcaaaaagggttcgatttcaaa
gaggcggcagatgcaactctttccgcagccatgcgtgttctgggccccgaggtagttttc
aaggtgcttccattgaacctagagccaggagtccgccaaccaggtcaagaacctcgagca
ttcttgctgcccctcatttcgcaaccccacccatcgcctctgggtcattttgtgtcctat
tttgtgccactgagtgagcgtatgtttgacctgcagcagacggctgccacacaaggacgg
caatcggaagcaaaggtttggaatgttttagtaggccaagtatggtcaggcctttcaggc
tactgctttgaaacccctgacttgaaagaggcactgaatcctgctttctcccagctactc
tcccagctcctgtatagccagtctgagcttcgacctgccattttgaaggccctcaggatc
ttagtggactcgaatctggctatttctgcgtcagacgccacacagacttcgttggcatca
ttaactccccaggaagctgccgctaatgttgtgttcctccgtacccaagtggagagttgg
ctagccgttctttttaacgtttttgggagtattggaagggattcgcggggtatgattgga
gatgtcattaccgcttgggcgagtattggtgaagaacaagaaattcataacgcgtatgac
aaagtcgtgcagttgttgaagaccaatctcgcgatgtgtcaaaaggcgcccgcaactacc
gccatcgaaaccaatgatgcaggaaatatgaccaccacatcgcaagatatcttaattttg
ctccttccgtacttatcccctgcagactctatgtcactcttcgatctctgcttaaccccc
gaaattctgaatggaagaaacaatggaatacagaagcggggctataagattttgaccaaa
ctcgtcgatggcggtatagtttctgtcaacgctgaaaccgttgttagaaagttagacgag
atggtggatggcttgactgccgccgccaagaaggatcgcttcaatttattggccctatta
atccctctgttgccaccatctgcaatgcacgttatcccgactctcatcccggaggccatt
ttgggaacaaaggaaccttccgagaaagcgcgaggggctgcattcgaggtcattctcgtg
atgggtcggaagatgagttctggaggtgtcgtgaaaaggagcatggttgatggaatggac
gaagacgctgttgatgccaaagcaagcatcgaagaatttatgacaatggtagtgggtggc
ctggctggtgcaagtccacacatgatcagtgccaccattacagctatctcccgccttgtg
tttgagttcaaagactcgatatccccaaatatgcactctgagatcttcatgatgctcctc
gtttttctttcctcggctaaccgagaaatcgtgaaatccgttcttggttttatcaaactg
gcgatccatacgctcccggcggatttaattcggccgcacctcaaggaccttgtcccaacg
cttttgaactggtctcatgatcataaaaatcacttcaaagttaaagttcggcatattttt
gaacgaatgctaagacgattcagctgggacgaggtctactcgtgtgctggcgaggaggaa
gccgcgaaagtactcgtcaatatcaaaaagcggaaagaccgagctaagcgcaagagagcc
aacagggccgacgaagatgaagacgcaaaggagccaaccttttcaaaacctgctgctggg
gatgcttttgaggatgtcctctatggcagcgagagtgaattagacgatgatagcgaggat
gataggcctgcacctcaagtacaatcgtcgaagaagaaagccgtcgagtatggggcgcgc
ttgcggctagacgacgatgaacccacggatctcctccaaggagctacgtcaaaaataact
agttctggtccaaatcgtcggcgcaaacctggacaagatgcagcacatttcaaaacagat
gaagatactgggaagatgattatcgatgccgattctgactctggggcttcctctggagcg
cacgctacagccgaagttgccggttctgcgtataaggagagcttgacgtcggttgatggc
ttcacaagaggtccaaatggtcgaatcaagtttcataaggatacaaaaaagcggagacgg
gagaatgaaggtgccgagcaggatgtggaaatggcagatggagaagttcaagaaactggc
aaggccaaaaaaagtaaaaagacgaccgagatcaagctaggccatgaattcaaggcaaag
aaagcgggaggtgacctcaagaagggtggcgttgacccctacgcgtacctatcattatca
caggcagcaaagaaaggcgggcggggaagtggcaaaattggaataacaggaaaacgttga
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integrated database retrieval system