Laccaria bicolor: LACBIDRAFT_315989
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Entry
LACBIDRAFT_315989 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
lbc
Laccaria bicolor
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lbc03016
]
LACBIDRAFT_315989
Enzymes [BR:
lbc01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
LACBIDRAFT_315989
Transfer RNA biogenesis [BR:
lbc03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
LACBIDRAFT_315989
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_endo
Activator_LAG-3
DUF6444
Rrn6_K-rich
Motif
Other DBs
NCBI-GeneID:
6074132
NCBI-ProteinID:
XP_001878603
JGI:
315989
UniProt:
B0D3N2
LinkDB
All DBs
AA seq
326 aa
AA seq
DB search
MSSDRQRIPLRIAGKRAYVWDVDDIATIRAQYRLCGVLTGTLPHLSQQNAFLGVPLVLMP
EEVALLLEIDAAVLIDDPKSHIQPTMPELQRWNAGQQESIRAQVAFTETKSARESANAGR
AMSEDALRKRKEREERKKAEASRLAEIAARSDGDLLALSEPTPAQAPPIHSDPAVSAAGN
QTEPLSSIPYAVVVSAPSSSFEWYNPSGRFYSSLEDARAAGVWDYPSTLEERARCGVFSG
LWKQGFFMGGGIKFGGDYLVYPGDPLRYHSHFAASVLVSPISALRPMEIVAHGRLGTATK
KAHLLCGWDDEKQEVSYLSIEWAGFG
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgagctcggacagacaacggataccgctgagaatagcgggtaagagggcatatgtgtgg
gatgtagacgacatcgccacaattcgtgcacaatatcgcctctgcggagttctgactggt
actctgccgcatctatctcaacaaaatgccttccttggtgtaccattagttttaatgccc
gaggaggttgcgctcctactagaaatcgacgctgccgttctcattgacgaccctaaatca
cacattcagcctacaatgccagaattacaacgctggaatgcaggacaacaagaatcaatt
cgtgctcaagtcgccttcacggaaacaaagtctgcaagggagagtgccaacgctggccga
gcgatgtctgaagatgcgcttcgcaagcggaaagaaagagaggaacgcaaaaaagcagag
gcttcgaggcttgccgaaattgctgctaggtctgacggagaccttttggcgctgtctgaa
ccaacaccagctcaagctccgccaatacattcagatcctgctgtttctgcagcaggtaat
caaaccgaacctttgtcttccataccgtatgcggtcgttgtgtctgcgccatcctcttca
tttgagtggtataacccgagcgggcgcttttattcatcgctcgaggatgcaagagctgct
ggagtctgggattatccttccactttggaagaacgtgcaaggtgtggggtatttagtggg
ttatggaagcaaggcttttttatgggcggtgggatcaaatttggtggcgattacttggtg
tatccaggtgacccactgcgctatcattcacacttcgcggcctccgttttggtatcacct
atctctgctttgagaccgatggaaatcgttgcacatgggcggttgggaactgccacgaaa
aaggcccatcttctctgtggatgggacgatgagaagcaagaagtctcctatttgtctatc
gaatgggctggatttgggtag
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