Laccaria bicolor: LACBIDRAFT_318813
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Entry
LACBIDRAFT_318813 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
lbc
Laccaria bicolor
Pathway
lbc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
LACBIDRAFT_318813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbc03021
]
LACBIDRAFT_318813
Transcription machinery [BR:
lbc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
LACBIDRAFT_318813
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
Tau95
WHD_2nd_SelB_bact
Motif
Other DBs
NCBI-GeneID:
6075611
NCBI-ProteinID:
XP_001879688
JGI:
318813
UniProt:
B0D756
LinkDB
All DBs
AA seq
351 aa
AA seq
DB search
MDVAQDDERKPFDAETGNDEDAQPDPDEHLMLDQGNGKVWLVKIPKFLMERWASVNVEDA
HLATLRVYTNNDPTTGRPRIILFLPPNINPNTPNAPLPYNPNRPLFQTTTYYPTTGAEPD
CYELDMVHDNVENQIVVAERPKDPSLSVSTSAAAATVNSRARTTVLTGRIKHECNLRPAF
SQTYRKQMKERHKKYNTPVRQIRMIEDAGVPGGRGGVNRLSSGVGVGAGAAFGDLIKVKP
KQPKGTFERMARMPRNQLLDQIFSLFRETPHWGIRPLREKTQQPEAYLKEVLSEVAFLHR
SGEHSGFFELKENYKDEGMKGENVPGPLPGDTKMEDEDDDDDEDEDMEEVS
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggcccaggacgatgaaagaaagcccttcgatgccgagactgggaatgatgaa
gatgctcagcccgacccagatgagcacctcatgctagatcaaggcaatggaaaagtttgg
ctcgtcaagatcccaaagtttctcatggaacgctgggcatctgtaaacgttgaagacgcc
catttggcgacgctgcgagtttacacgaacaacgatccaacaaccggcaggccacgcatt
atcttgttcttaccacccaacatcaaccccaatacccccaacgcgccgctcccgtataac
cctaatcgaccgctttttcagacaacgacatattacccgacaacgggtgcggagccagat
tgctacgagctcgacatggtgcacgacaacgtcgagaaccaaattgtcgttgccgagcgc
ccgaaggacccatctctgagtgtttccaccagcgctgcggctgctacggttaattctcgt
gcgcggacgacggtgctcactggaaggatcaaacatgagtgcaatcttcgaccagcgttt
agccagacatacagaaagcagatgaaggagcgacataagaagtataacaccccggtgcgg
cagatcaggatgattgaggacgctggcgttccaggcggcagaggtggtgttaacagactg
agcagtggggtgggtgttggcgctggtgctgcgtttggtgaccttatcaaagtcaagcct
aaacagccgaaaggaactttcgagcgtatggctcgtatgcctaggaaccaacttttggac
caaatcttctcgctcttccgcgaaacaccacactggggtatacgtcctctgcgagaaaaa
actcaacaaccggaagcgtatctgaaagaagtattgtcagaggtcgcgttccttcatcgg
agtggtgaacatagcggtttctttgaattgaaggagaactacaaggacgaaggcatgaag
ggtgaaaatgttccgggaccacttccgggggatacaaagatggaggacgaagatgacgac
gacgacgaagatgaggatatggaggaagtctcctag
DBGET
integrated database retrieval system
