Laccaria bicolor: LACBIDRAFT_320441
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Entry
LACBIDRAFT_320441 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K12830
splicing factor 3B subunit 3
Organism
lbc
Laccaria bicolor
Pathway
lbc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LACBIDRAFT_320441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbc03021
]
LACBIDRAFT_320441
03041 Spliceosome [BR:
lbc03041
]
LACBIDRAFT_320441
03036 Chromosome and associated proteins [BR:
lbc03036
]
LACBIDRAFT_320441
Transcription machinery [BR:
lbc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
LACBIDRAFT_320441
Spliceosome [BR:
lbc03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
LACBIDRAFT_320441
Complex B
LACBIDRAFT_320441
Complex C
U2 SnRNP specific factors
LACBIDRAFT_320441
Chromosome and associated proteins [BR:
lbc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
LACBIDRAFT_320441
TFTC complex
LACBIDRAFT_320441
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_RSE1_2nd
Beta-prop_THOC3
Beta-prop_BBS7
Methyltransf_36
Motif
Other DBs
NCBI-GeneID:
6069153
NCBI-ProteinID:
XP_001873153
JGI:
320441
UniProt:
B0CPE1
LinkDB
All DBs
AA seq
1213 aa
AA seq
DB search
MHLYNLTLQPPTAITQAIVGNFSGARQQEIIVSHGTRLELLRPDVQTGKISTVIATDVFG
SIRSLAAFRLTGGTKDYAIVGSDSGRIIILDYDPKTSSFVKLHQETYGKSGARRIVPGQY
LATDPKGRSVMISAMEKAKLVYILNRDAAANLTISSPLEAHKNSAIIHHIVGLDVGFENP
MFAALEVDYAESDQDPTGDAFKNAEKMLTYYELDLGLNHVVRKWSEPTDPRANLLVQVPG
GQLASSERFDGPSGVLVCCENHIIYRHADVPQHRVPIPRRRHPLEDLNRGLIITAAVMHK
MKGAFFFLLQSEDGDLYKVTIEHEDEEVKSLKIKYFDTVPVASNLCILKSGFLFVASEFG
NHYLYQFQKLGDDDDEPEFSSTSYPSFGMADPSVPLPHAFFRLHPLDNLVVADELESLDP
ILDSKVMNLLPNSDTPQIFAACGRGARSTFRTLRHGLEVEESVSSDLPGIPNAVWTTKRT
EDDPFDSYIILSFVNGTLVLSIGETIEEVQDTGFLSSAPTLAVQQIGADALLQVHPHGIR
HVLADRRVNEWRVPQGKTIVSATTNKRQVVVALSSAELVYFELDLDGQLNEYQDRKAMGS
TVLALSIGDVPEGRQRTPYLAVGCEDQTVRIISLDPETTLETISLQALTAPPSAICIADM
LDASINKSQPTMFVNIGLQNGVLLRTVLDPINGQLTDTRTRFLGTRPIKLVRVQIQRNPG
ILALSSRSWLNYTHQNLMHFTPLIYDNLDYAWSFSAELSPEGLIGIAGSVLRIFQVPKLG
TKLKQDSIPLSYTPRKFITHPGNNYFYLIEGDHRTLGEEAASTKLDEFRRQGKSFDDGEI
NIPPEVFGRPKAPAGTWASCIRIIDPVEAKTVAVIPMDSNEAAFSLAIVPFSARNGELHL
VVGTAADTIVSPRSCTSGYLRTYKFTNEGAGLEFQHKTEVDDVPLALLAFQGRLVAGVGK
ALRIYDIGKKKLLRKVENKTFSSAIVTLSTQGSRIIVGDMQESIQFAVYKPPENRLLVFA
DDSQPRWITASSMVDYNTIVAGDRFGNIFVNRLDPKVSEQVDDDPTGAGILHEKGILMGA
PHKTKMLAHFHLGDLVTSIHKVSLVAGGREVLMYTGLHGTIGILVPFVSKEDVDFISTLE
QHMRTEQSSLVGRDQLSWRGYYAPVKAVVDGDLCETYARLPAAKQSSIAGELDRTVGEVL
KKLEQLRVTTSGF
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgcacttgtacaatttgacacttcagcctcctaccgcaataacacaggcaattgttggc
aatttctcgggcgcccggcagcaggaaatcattgtttctcatggaacgcgtctcgaactc
ctacgtcccgacgtacagactggaaaaatatcgactgtcattgcaaccgacgtctttggg
tccattcgttccctcgctgcgtttcgtttgactggcgggaccaaggattacgccatagta
ggctctgattcgggacgtatcattatcctggattatgaccccaaaaccagcagcttcgtc
aaacttcaccaggaaacatacgggaaatcgggtgctcgtcgtattgttcctggccaatat
cttgccacagatccaaagggacgcagtgtcatgatatctgctatggaaaaggcaaagctg
gtttacatcctcaaccgcgacgccgcggccaacttaacaatctcatcaccacttgaggcg
cataaaaactccgccatcattcaccacatcgtcggtttagatgttggattcgaaaatcca
atgttcgcagcgttagaggttgattatgcagaatcggatcaagacccaacaggtgatgca
tttaagaatgccgaaaagatgttgacctactatgaactggatcttggtcttaaccacgtt
gtacgcaaatggagcgaaccaaccgaccctcgcgctaacctgctcgtgcaagttcctggc
ggtcaactcgcttcatccgagcgcttcgatggcccctctggtgttcttgtttgctgtgaa
aatcatattatttatcgacatgctgatgttcctcaacatcgtgttcccatacctcgccga
agacatcctctagaggaccttaaccgtgggctaatcattacggctgccgtcatgcacaaa
atgaagggagcctttttttttctgctacaaagcgaagatggtgacctgtacaaggtcacc
attgagcatgaagacgaagaagtgaaatcactcaaaatcaaatattttgatactgtacct
gtcgcctctaatctttgtattctcaaatctggtttcctttttgtcgcgagcgaatttgga
aatcattacctttaccaatttcagaaacttggtgacgacgatgacgagccagaatttagt
tcaacatcatatccatcctttggcatggctgacccatcggttccgctaccgcacgcattt
tttcgactacaccctttggacaaccttgtggttgctgatgaattggaatccttggatccg
attttagactccaaggtcatgaaccttctcccaaactcagacactccccagatcttcgca
gcttgcggacgcggcgcacgcagtactttcaggacactacgtcatggccttgaagtcgag
gaatcggttagttctgatcttccaggcattccgaatgctgtttggacgacgaaacggact
gaagatgaccccttcgattcttatatcatcttatcattcgtcaacggcaccctggtgctc
tctatcggagaaacgattgaagaagtgcaggatacgggatttttgtcatccgccccgaca
cttgcagttcagcaaatcggtgcagacgcgctcttgcaggttcacccccacggtattcgt
cacgtcctcgccgatcgccgtgtaaatgaatggagggtgccacagggaaaaacaattgtt
agtgcaacaacgaacaaaaggcaagttgtggttgctttgagctctgcggagctggtttat
tttgagttggatctggatggtcagctaaatgaatatcaagatcgaaaggcgatgggcagt
acagttcttgcgctgagcatcggtgacgttcctgaaggcagacagagaactccctatctc
gcggtaggctgcgaggatcagactgttcgaatcatctcgctggacccagaaactactctg
gagaccatcagtttacaagctttgactgctcctccttccgctatatgcatcgcagatatg
ctagatgcgagcatcaacaaatcgcagcccacgatgtttgtcaacattggtctccagaat
ggcgttctactacgtacggttcttgatcctatcaatggccagttgacggatacacggact
cgcttcttggggaccaggcctatcaaattagtccgagtgcagattcagcgcaatcctggg
atacttgctttgtcctcgaggtcctggctaaactacacacatcaaaatcttatgcacttc
acgcctctaatttatgataacctcgactatgcgtggagcttctccgcagagctaagcccg
gaaggtctgatcggtatcgcaggcagtgttcttcggatattccaggtccctaaattggga
acgaagttgaaacaagattcgatccccctctcatacacaccccgcaaattcatcacacat
ccaggaaataattatttttatctcatcgagggtgatcacaggacgttgggagaggaagct
gcgagcacaaaacttgatgaatttcgtcggcaaggtaaaagtttcgatgatggggaaatt
aacatccccccagaagtattcggccgaccaaaagcccccgccggaacttgggcttcctgc
atccgtatcatagatcctgttgaagcgaagacggttgctgtgattccaatggatagcaac
gaagctgccttctccctcgcaatcgtaccattctctgctcgaaacggagaacttcacctc
gtcgttggcactgctgcagataccattgtttctccccgctcatgtacaagcggctatctg
cgaacgtacaagttcacgaacgagggtgcaggtcttgagttccaacacaagaccgaggtt
gacgatgtcccactggccttgttagcattccaggggcgacttgttgccggtgttggcaag
gcactaagaatttatgatattggcaagaaaaaactgcttcgaaaagttgagaacaagacg
ttttcttccgcgattgttaccctgtctacccaaggttcaagaattatagttggcgatatg
caagaatcgatacaatttgccgtgtacaaacctcctgaaaaccggttgctagtattcgca
gatgacagtcaaccccgatggataacagcatcatcaatggtggattacaatacaatcgtt
gcgggtgaccgattcggaaatatctttgtcaatcgactcgatccaaaagtttctgaacaa
gtcgacgatgatcccactggtgctggcatcctccacgaaaagggcattttaatgggtgca
ccacacaagacaaaaatgcttgcccactttcaccttggagacctggtcacatcgattcac
aaagtgtcgcttgtcgcaggaggtcgggaggtcttgatgtacactgggcttcatggaacg
atcggcattctcgtgccatttgtttctaaagaagacgtggattttatctcaacgctcgag
caacatatgcgcactgaacaaagcagcttagttggcagagatcagctcagctggagggga
tactatgcccctgtgaaggcagttgttgatggtgatttgtgtgagacttatgcaaggctc
ccagcagctaagcagagctccattgctggcgaactcgataggaccgtcggtgaggtgctc
aaaaagcttgaacaactgagggtgacaacaagtggattctag
DBGET
integrated database retrieval system