Laccaria bicolor: LACBIDRAFT_322930
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Entry
LACBIDRAFT_322930 CDS
T01044
Symbol
CHE16201
Name
(RefSeq) SWI-SNF chromatin remodeling complex, Snf5 subunit
KO
K11770
chromatin structure-remodeling complex subunit SFH1
Organism
lbc
Laccaria bicolor
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbc03021
]
LACBIDRAFT_322930 (CHE16201)
03036 Chromosome and associated proteins [BR:
lbc03036
]
LACBIDRAFT_322930 (CHE16201)
Transcription machinery [BR:
lbc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
RSC complex
LACBIDRAFT_322930 (CHE16201)
Chromosome and associated proteins [BR:
lbc03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
LACBIDRAFT_322930 (CHE16201)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
Motif
Other DBs
NCBI-GeneID:
6071748
NCBI-ProteinID:
XP_001875852
JGI:
322930
UniProt:
B0CVL6
LinkDB
All DBs
AA seq
427 aa
AA seq
DB search
MPAAIPNPPRPPLPTTPQALQSTYASRLRTGATLLIQPILANAAASTTRAATRRGGVINY
ADPGSGDDLPDAGALESDDSDFIASGGTRTSIRQSRGGRMSGATGGASSPHPTAPLRPEK
AELDQSYLGLVPPAKFIKPKLMTPTLHIYPTPDVMESQAQRRSSLVPIRIEFETDTYRVR
DCFVWNLNETIIKPETFARILCNDLDLSPNQWADTVANQIRAQLEEHEGVASMELGLDGA
VDIDAPPTHGEEIAECRVILSIDVQIANHHLMDHIEWDLLSPLTPEAFSQKLCTELGLSG
EAVPLIAHAVHEELIKHKKDAIEWGVIGGDREPADDGSGVRDRSGAGMLKDKTGLGLGWG
RAPRDGRGPKTLKSVWRDWAEAEEFRTTFEELTAEEVERRETERERASRRLRRETSKFQS
STRSRRR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgcccgctgccattccaaatcctcctcgaccaccattaccgacaacgcctcaagctctg
caatctacctatgcatcgcgtctgagaaccggcgcaacgcttcttatccaacctatcctt
gcaaacgctgctgcttcaacaacacgcgctgcaacaaggcggggtggcgtaatcaattat
gcggatccaggttcaggagacgatttaccagacgctggtgctctcgagtccgacgactct
gactttatcgcgagtggtggtacaaggacgtcaataagacaatctagaggaggtagaatg
agtggtgctacgggaggtgcctcttcaccacaccccactgccccgttacgaccagaaaag
gctgaactagaccaaagctacctaggcttggtacctcccgcgaaatttatcaagccaaag
ctaatgacgccaacattacacatataccctacacctgatgtgatggaatcccaagcgcaa
agacggagttccctcgtcccaattcgcatcgaattcgagacggacacgtatagggtacgg
gactgtttcgtgtggaatctgaacgagaccatcatcaaaccagaaacatttgcgagaata
ctttgcaacgatcttgacctttcacccaaccaatgggcagataccgttgcaaatcagatc
cgcgcacagttggaagaacacgaaggagtagcgtctatggaactggggttggacggagca
gtggacatcgacgcgccaccaacgcacggggaggaaattgccgaatgtcgagttatccta
agtattgacgtccaaatcgcgaaccaccatctaatggaccacattgaatgggatctcctc
tcccccctcacccccgaagccttttcacaaaagctatgcacggaacttgggttatccggg
gaagctgtccccttaatcgcacacgccgtccacgaagagcttataaagcacaaaaaagac
gctatcgagtggggagtgatcggcggggacagagagcccgccgacgacgggtcaggcgtt
cgagataggagtggggctggaatgttaaaggacaaaacggggctcggacttggttggggg
agggcgccgagagatgggagagggccgaaaacgctgaagagtgtttggagggattgggca
gaggcggaggagtttaggacgacgtttgaagagttgactgctgaggaggtggagaggagg
gagactgaacgagagagggcgagccgacgtctgaggagagagacgtccaagttccagagt
tcaacacgcagtagacgaagataa
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