Laccaria bicolor: LACBIDRAFT_327221
Help
Entry
LACBIDRAFT_327221 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K13126
polyadenylate-binding protein
Organism
lbc
Laccaria bicolor
Pathway
lbc03015
mRNA surveillance pathway
lbc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
LACBIDRAFT_327221
09123 Folding, sorting and degradation
03018 RNA degradation
LACBIDRAFT_327221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbc03019
]
LACBIDRAFT_327221
03041 Spliceosome [BR:
lbc03041
]
LACBIDRAFT_327221
Messenger RNA biogenesis [BR:
lbc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
LACBIDRAFT_327221
mRNA cycle factors
Stress granule specific factors
LACBIDRAFT_327221
Spliceosome [BR:
lbc03041
]
Complex C
Other components
Complex C specific factors
LACBIDRAFT_327221
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
6076883
NCBI-ProteinID:
XP_001881076
JGI:
327221
UniProt:
B0DBJ1
LinkDB
All DBs
AA seq
870 aa
AA seq
DB search
MFSWRKSVLIIILVATSVAAAPSPKDTRHVRDGSLDNPSFANHAPVWNEGAASEPLIAIE
GETPQYEWDLPAMTTLKEERFQELMRIFIGTPQPPKSGVQPARPTNEFLRTRRRIGRRRH
PMDPDYQHPQDSDFQGPQPHPYLHDPLLHITNLPSYVSDENLAVAFMTCGPFRPKIPRDS
ASGLLSGTIEFKFLEKAEKALATLQSRLIPNLQPPVPLVLSPYPPTNPPTPLPPPSALPR
LVKHLPPGYTDSQLFDLFRPFGALASARTQTHFGADTGMVEFWNENDARQAEDSLHCADI
EGQNIAVQVYQPRRTSGGAIPEFNASAPTFVPSGSMYSPYPTQNLDPDIDSNGLFTHFRQ
FGMIVSARVMRNENGESRGFGFVSYQTPDQANAAMHAMNGAQLGSKQVVVRLHEPKQLRQ
EKLAQRFGHNGHPRSSSGATSPTASEVGDYSGWGSPRLLPTSLGSPKGSIYERPERGRRG
SGSYYNAALTGTLNLPMRYDDLASLSPVVRKEVLTGELSRRVKKLDIVPAKEINSIVESL
VNVSLSEVLQYVEDPGRLQEQVEIIKAKRFKASTPEKSPSRSASASQDSRLLDPNALNAT
ASAPEHPSTPISVSESSSPPRTSSPSGSVPPISERDRIIAAVGKLESTRHSELTDLLMSL
PKRDRALCLFNAEYLRTKIADAKMVLDSEDGDEEEDRNPPDSQSTKSAPHTVPVTPQPKK
TAPRVVDSPQTPDLSSRGPSANASPLPPTPGSASSTHTLASLSKLPAAEIIRLSNSSSAT
GLPLPKADPLVVQATDEFIDSLLGKPPQVQKQQLGDKLFKVVKSFGIKGAPKVTIALLDQ
EDLRALAHLMNSFPSVLKDKALRVAASLAK
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgttctcctggcgcaaatctgttttgattatcatcctggttgcgacttccgttgctgcg
gcgccttcacctaaagacacccgacacgttcgcgacgggtccctggataatccctcattc
gcaaatcatgcgccagtttggaatgaaggagctgcttccgaacctctcatcgcgatagag
ggagagacacctcagtacgagtgggatttgcctgcaatgacgacactgaaggaagaacgg
ttccaggagcttatgagaatatttattggaactccacaaccaccaaaatcgggtgtgcaa
ccagctagacctacaaacgagtttcttagaacgcgccgccggattggtcgtcggcgacac
ccaatggacccagactatcagcatcctcaagactccgacttccaggggccccaacctcac
ccatacctccacgaccccctcctacacatcactaatctcccttcatatgtctctgatgaa
aatttagccgtcgccttcatgacttgtggtccatttagacctaagattccccgcgacagt
gcatccggtctgttgtcgggcaccattgaattcaaattcctcgagaaggccgagaaggca
ctggcaactctccaatcgcgtctcatccctaacctccaacctcctgtgcctttggtgctt
tcaccttatcctccaaccaatccaccaacgcctctgccgcccccatcagcgttgccgcgt
ctcgtaaaacacttaccgccaggttacaccgattcccagttgttcgaccttttcaggcct
tttggtgcactcgcgtccgcacgtactcagactcattttggcgcggacactggcatggtc
gaattctggaacgaaaatgatgcacgccaggctgaagactcgctgcactgtgcagacata
gagggccagaatatcgcagttcaggtttatcaacctagacggaccagtggaggagcaatt
cctgagttcaacgcgagcgctccgacattcgtgccctctggttcaatgtactcaccatac
ccaacccagaatttggatcctgacatcgactctaacggcctattcacccatttccgacag
tttggcatgatcgtcagtgcgcgtgtcatgcgcaatgaaaatggagagagtcgaggtttt
ggttttgtatcttatcaaacacccgatcaagccaacgcagctatgcatgcaatgaatgga
gcccaacttggctcaaaacaagttgtcgttcgactccacgagccgaagcaattgcgacaa
gagaaacttgctcagcgatttggtcacaacggccatcccaggagctcaagtggtgctaca
agccccacggctagtgaagttggcgactattctggctggggcagtccacgactcctcccg
acatctttgggttctcccaaaggaagcatttatgagcgacctgaaaggggaagaagagga
tctggcagctactacaatgctgctctcactggtactctcaatttgcccatgcgatatgat
gacctcgcaagcttgtcacctgttgtccgaaaagaggtgcttactggcgagctcagccgt
cgtgtcaagaaactggatattgtccctgccaaagagattaactccattgttgaatccctt
gtcaatgtctctctcagtgaggtcttacaatatgtggaagatcctggaagactccaggag
caagtggagataatcaaggccaaacgctttaaggcctctactcctgagaaatctccttct
aggtctgcgtcggcttcacaggattcgcgacttcttgatccaaatgctctcaatgctacg
gcgagcgctcccgagcacccatcaactccaatctcagtcagcgagtcgtcaagtcctcct
cgtacctcctcgccctctggctcagttccacccatatcagaacgcgatcgcataatcgca
gccgtcggaaaacttgagtccacacgacactctgaactaaccgacctgttgatgagcctc
ccgaagcgcgatcgtgctctgtgtctcttcaatgctgaatatctgcgtaccaaaatagct
gatgcaaaaatggtattggatagcgaagatggagatgaagaagaagataggaatccccct
gattcacagtcaaccaagtctgcgccccatacggtgcctgtgacgcctcaacccaagaag
acagcccccagagttgtagattcgccgcagactccagatttgtcttctcgcggtccttca
gcgaatgcgtctccattgccaccaacacctggcagcgccagctccacgcatactttggcg
tctctctcaaagctacctgcggccgaaatcattcggctttccaactcctcttcagctact
ggactacctttacccaaggcagatcccctcgtagttcaggctactgatgaattcattgat
agcctcttgggtaagccaccccaagtgcagaagcaacaacttggagacaaactcttcaaa
gtcgtcaaatcatttggtatcaagggggctccaaaggttacgattgcccttctggaccaa
gaggatctccgggcccttgcccacctgatgaatagcttcccgtccgtgctcaaggacaaa
gcactacgagtcgctgccagcctcgccaagtaa
DBGET
integrated database retrieval system