KEGG   Laccaria bicolor: LACBIDRAFT_327221
Entry
LACBIDRAFT_327221 CDS       T01044                                 
Name
(RefSeq) hypothetical protein
  KO
K13126  polyadenylate-binding protein
Organism
lbc  Laccaria bicolor
Pathway
lbc03015  mRNA surveillance pathway
lbc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lbc00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    LACBIDRAFT_327221
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LACBIDRAFT_327221
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lbc03019]
    LACBIDRAFT_327221
   03041 Spliceosome [BR:lbc03041]
    LACBIDRAFT_327221
Messenger RNA biogenesis [BR:lbc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     LACBIDRAFT_327221
   mRNA cycle factors
    Stress granule specific factors
     LACBIDRAFT_327221
Spliceosome [BR:lbc03041]
 Complex C
  Other components
   Complex C specific factors
    LACBIDRAFT_327221
SSDB
Motif
Pfam: RRM_1 MLLE Nup35_RRM_2
Other DBs
NCBI-GeneID: 6076883
NCBI-ProteinID: XP_001881076
JGI: 327221
UniProt: B0DBJ1
LinkDB
AA seq 870 aa
MFSWRKSVLIIILVATSVAAAPSPKDTRHVRDGSLDNPSFANHAPVWNEGAASEPLIAIE
GETPQYEWDLPAMTTLKEERFQELMRIFIGTPQPPKSGVQPARPTNEFLRTRRRIGRRRH
PMDPDYQHPQDSDFQGPQPHPYLHDPLLHITNLPSYVSDENLAVAFMTCGPFRPKIPRDS
ASGLLSGTIEFKFLEKAEKALATLQSRLIPNLQPPVPLVLSPYPPTNPPTPLPPPSALPR
LVKHLPPGYTDSQLFDLFRPFGALASARTQTHFGADTGMVEFWNENDARQAEDSLHCADI
EGQNIAVQVYQPRRTSGGAIPEFNASAPTFVPSGSMYSPYPTQNLDPDIDSNGLFTHFRQ
FGMIVSARVMRNENGESRGFGFVSYQTPDQANAAMHAMNGAQLGSKQVVVRLHEPKQLRQ
EKLAQRFGHNGHPRSSSGATSPTASEVGDYSGWGSPRLLPTSLGSPKGSIYERPERGRRG
SGSYYNAALTGTLNLPMRYDDLASLSPVVRKEVLTGELSRRVKKLDIVPAKEINSIVESL
VNVSLSEVLQYVEDPGRLQEQVEIIKAKRFKASTPEKSPSRSASASQDSRLLDPNALNAT
ASAPEHPSTPISVSESSSPPRTSSPSGSVPPISERDRIIAAVGKLESTRHSELTDLLMSL
PKRDRALCLFNAEYLRTKIADAKMVLDSEDGDEEEDRNPPDSQSTKSAPHTVPVTPQPKK
TAPRVVDSPQTPDLSSRGPSANASPLPPTPGSASSTHTLASLSKLPAAEIIRLSNSSSAT
GLPLPKADPLVVQATDEFIDSLLGKPPQVQKQQLGDKLFKVVKSFGIKGAPKVTIALLDQ
EDLRALAHLMNSFPSVLKDKALRVAASLAK
NT seq 2613 nt   +upstreamnt  +downstreamnt
atgttctcctggcgcaaatctgttttgattatcatcctggttgcgacttccgttgctgcg
gcgccttcacctaaagacacccgacacgttcgcgacgggtccctggataatccctcattc
gcaaatcatgcgccagtttggaatgaaggagctgcttccgaacctctcatcgcgatagag
ggagagacacctcagtacgagtgggatttgcctgcaatgacgacactgaaggaagaacgg
ttccaggagcttatgagaatatttattggaactccacaaccaccaaaatcgggtgtgcaa
ccagctagacctacaaacgagtttcttagaacgcgccgccggattggtcgtcggcgacac
ccaatggacccagactatcagcatcctcaagactccgacttccaggggccccaacctcac
ccatacctccacgaccccctcctacacatcactaatctcccttcatatgtctctgatgaa
aatttagccgtcgccttcatgacttgtggtccatttagacctaagattccccgcgacagt
gcatccggtctgttgtcgggcaccattgaattcaaattcctcgagaaggccgagaaggca
ctggcaactctccaatcgcgtctcatccctaacctccaacctcctgtgcctttggtgctt
tcaccttatcctccaaccaatccaccaacgcctctgccgcccccatcagcgttgccgcgt
ctcgtaaaacacttaccgccaggttacaccgattcccagttgttcgaccttttcaggcct
tttggtgcactcgcgtccgcacgtactcagactcattttggcgcggacactggcatggtc
gaattctggaacgaaaatgatgcacgccaggctgaagactcgctgcactgtgcagacata
gagggccagaatatcgcagttcaggtttatcaacctagacggaccagtggaggagcaatt
cctgagttcaacgcgagcgctccgacattcgtgccctctggttcaatgtactcaccatac
ccaacccagaatttggatcctgacatcgactctaacggcctattcacccatttccgacag
tttggcatgatcgtcagtgcgcgtgtcatgcgcaatgaaaatggagagagtcgaggtttt
ggttttgtatcttatcaaacacccgatcaagccaacgcagctatgcatgcaatgaatgga
gcccaacttggctcaaaacaagttgtcgttcgactccacgagccgaagcaattgcgacaa
gagaaacttgctcagcgatttggtcacaacggccatcccaggagctcaagtggtgctaca
agccccacggctagtgaagttggcgactattctggctggggcagtccacgactcctcccg
acatctttgggttctcccaaaggaagcatttatgagcgacctgaaaggggaagaagagga
tctggcagctactacaatgctgctctcactggtactctcaatttgcccatgcgatatgat
gacctcgcaagcttgtcacctgttgtccgaaaagaggtgcttactggcgagctcagccgt
cgtgtcaagaaactggatattgtccctgccaaagagattaactccattgttgaatccctt
gtcaatgtctctctcagtgaggtcttacaatatgtggaagatcctggaagactccaggag
caagtggagataatcaaggccaaacgctttaaggcctctactcctgagaaatctccttct
aggtctgcgtcggcttcacaggattcgcgacttcttgatccaaatgctctcaatgctacg
gcgagcgctcccgagcacccatcaactccaatctcagtcagcgagtcgtcaagtcctcct
cgtacctcctcgccctctggctcagttccacccatatcagaacgcgatcgcataatcgca
gccgtcggaaaacttgagtccacacgacactctgaactaaccgacctgttgatgagcctc
ccgaagcgcgatcgtgctctgtgtctcttcaatgctgaatatctgcgtaccaaaatagct
gatgcaaaaatggtattggatagcgaagatggagatgaagaagaagataggaatccccct
gattcacagtcaaccaagtctgcgccccatacggtgcctgtgacgcctcaacccaagaag
acagcccccagagttgtagattcgccgcagactccagatttgtcttctcgcggtccttca
gcgaatgcgtctccattgccaccaacacctggcagcgccagctccacgcatactttggcg
tctctctcaaagctacctgcggccgaaatcattcggctttccaactcctcttcagctact
ggactacctttacccaaggcagatcccctcgtagttcaggctactgatgaattcattgat
agcctcttgggtaagccaccccaagtgcagaagcaacaacttggagacaaactcttcaaa
gtcgtcaaatcatttggtatcaagggggctccaaaggttacgattgcccttctggaccaa
gaggatctccgggcccttgcccacctgatgaatagcttcccgtccgtgctcaaggacaaa
gcactacgagtcgctgccagcctcgccaagtaa

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