Laccaria bicolor: LACBIDRAFT_396054
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Entry
LACBIDRAFT_396054 CDS
T01044
Symbol
CHR16213
Name
(RefSeq) SWR1 complex protein, SNF2 family DNA-dependent ATPase
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
lbc
Laccaria bicolor
Pathway
lbc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
LACBIDRAFT_396054 (CHR16213)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lbc03036
]
LACBIDRAFT_396054 (CHR16213)
Chromosome and associated proteins [BR:
lbc03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
LACBIDRAFT_396054 (CHR16213)
SWR1 complex
LACBIDRAFT_396054 (CHR16213)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
HSA
Motif
Other DBs
NCBI-GeneID:
6084418
NCBI-ProteinID:
XP_001888778
JGI:
396054
UniProt:
B0DXZ3
LinkDB
All DBs
AA seq
1767 aa
AA seq
DB search
MAGKAVNGTSDDGERTGSVTRSVRGHGKKGSAASASVNGSGKSRSRYAKKAAAPSPIVTQ
EMIEAERALLLAEKQAQLEEVLDRHDDLIRECFHMEHFRLMASFNPVESKQDNSPVFREY
KSKYDLVQHAAPIAGPSRQTRRAHNERQKALTATPSISAPPALSTSKKQKKKLKPKAPNT
AAIWDILSAAREQARGRGKGKGKEKELEPEPEPKSESESTPTPESTRPPESEPPPESASA
PESTQVPKTLPELERGLTPKTPPEPEQPPAPEITPEFALEPESKLLESQAVSDDLPTTEL
DHAEEVLEESISIVATPRNGRRPSPFTTESGAEEVPEESISILATRRNGKRPASALESTT
QVAKRHKADRKVVFDDKEQPCPPVEESISVGLARRSGRLKDIAVVQPPLAKKSRSAPAFR
PSEIPPPQTPQETKVAPTSLTPTYNVKRIKLIVRRPPYQVTNPLQRPIPPKFNNSLYGFL
SSYNILDDKEVSVQKINKLALAEAAVHERVEKFRKDGRFIPGTDALFGTRPEKLVYITPK
RVSRDAWDDVVEAVIAYGKSRSKKSSGRTVAGQVANKIQGYWDGQEARKDKARVQEERRL
RALAKSTIRQVIGEWKKAVFHIREQERMKLEAEELKRGHAHLDAILHQSGHILETQQGDL
ARGEMLASRSRSSSVSDRFRDWGSDEEEEEEEADDGQEEQGEEEEEEEKGPEPVLEGEED
VVMGGSDDEAQSSMLLPSQKVTRTLTPSSTTSGPPEEEDASTGQLLPDEQHRTTPSDDES
SIASLDDLMIPDPESSPRQIHSNLVLNLTDYPDSDSSPSTPRPLPSEEGGEMLDEPELPR
ATSVSSSRRTPTSFVAETPADEPDVPMNKPDVEIPSPSSPGVGPSVALDNQDQDVETLDR
NEPLPFAGEEIPDLQPEAKAEIFEEIQEDELDAEAPELQIPAYLKPYAVAPVDWDPSAKI
LPPLLLRGTLRPYQQSGLEWLVSLHTRNHNGILADEMGLGKTIQTIALLAHLACDRGIWG
PHLIIVPTSVLLNWEMEFKKFLPGFRILSYHGSTKRRKELRQGWNDKSHFNVCITSYTLA
SKDAHIFKRKAWYYMILDEAHMIKNFKSQRWNILLMFRSFRRLLLTGTPLQNNLTELWAL
LQFLMSGSNFANVKEFALWFSAPLEAAIERGGALDADTTERILKLHTVLRPYLLRRMKRD
VEKELPSKYEHLLLCPLSKRQRFLYDEFMSRAQTRESLQSGVYQKIANILMQLRKVCNHP
DLFEVRPIVTSFAMPRSAIADFEIKELLIRKRLLANDDDENINLDSLGFRFIDRQDEPLL
TALETKRLDATSHLPHFLDTPGEPPPKDTRTIAGFRRYSEYLQRANTIARWSQIGHLNRL
RCNQFPIYGQECITTVQKMCRPIIPLSDLDVRFNHLDTVYSVNAAVKSYVSRGQEMAGLI
ERFAFVTPPVVALDMPQIVLSGHEELLVSQPPSFDDLLHHASVKLQIAFPHPSLLQYDCG
KLQELANLLRDKKAGGHRVLIFTQMTKILDILEIFLNFHGYLYLRLDGATKIEDRQYITE
RFNADPRVFCFIASSRSGGVGINLTGADTVVFYDSDFNPQMDRQCEDRAHRIGQIRDVHI
YRFVSQHTVEEAMLRKANQKRSLDDIVIQKGEFDWRSLFNDEGALTAALGDFEDAEDAHA
AAVAAKEENAMEGADEEDFADTADAAPPVPAPDTATVSPPENEPNQDGTVNAEGEEDQEE
EEEGGTVVDYLLTFAQRDWEFFKEWRL
NT seq
5304 nt
NT seq
+upstream
nt +downstream
nt
atggctgggaaagcggtgaatggcacctcggatgatggcgagaggactgggtcggtgacg
aggagtgtgcgtgggcatgggaagaagggcagcgcggcttcggcttctgtgaatgggagt
ggaaaatcgaggtctaggtatgcaaagaaggctgctgcgccgagccctatcgtgacgcaa
gagatgatagaggcggagagggcgctgttgctggcggagaaacaggcgcagttggaggag
gtgctggatagacatgatgacctcatccgagaatgctttcatatggagcatttcagatta
atggcctcgttcaacccagtggaatccaaacaggataattcgcctgttttcagagagtat
aaatccaaatatgacttggtccaacatgctgctcctattgcgggcccatcacgtcaaaca
cgcagggctcacaacgaacgtcaaaaggctctcaccgcaacaccctcgatatctgcgcct
cctgctctcagtacgtcaaagaagcagaagaagaaactaaagcccaaggctcctaataca
gctgcaatatgggatattctcagcgctgctcgtgaacaagcgagagggagaggaaaggga
aaggggaaggaaaaagagcttgaaccagaaccagaaccaaaatccgagtctgagtcaaca
ccaacaccagaatcaacacggccacccgaatcagaaccaccacctgaatcagcgtcggca
cctgaatcgacacaagtgccaaaaacattaccagaactagaacgaggtttaacaccaaaa
acaccaccagaaccagaacaacctccagctccagaaataacaccagaattcgcgctagaa
ccagaatcaaagttattagaatcccaggctgtgtctgatgatcttcctaccaccgaatta
gatcacgctgaagaagtgcttgaagaatccatctctatcgtagctacgccaaggaacggt
agacgcccatctccctttaccaccgaatcaggtgccgaagaagtgcccgaagaatctatc
tctatcttagccacgcgaaggaacggcaaacgcccagcttccgctttagagagtacaact
caagttgcaaaacggcataaggctgataggaaggtcgtgttcgatgacaaggagcagcca
tgtcctcccgttgaagaatctataagtgtggggttggcgcgaaggagcgggagattgaaa
gatattgccgttgtgcaaccgccacttgccaagaaatcacgttctgctccagcatttcgc
ccttctgagataccgcctcctcagaccccgcaggagacaaaagtcgcaccgacctcatta
actccgacatataatgtaaaacgaataaagctcatagttcgacgaccgccctatcaagtc
acaaatcctcttcagcgaccaatccctccaaaattcaacaactcgctatatggcttcctt
tcctcgtataacattcttgacgacaaagaagtcagtgtacaaaagataaataaactagct
ttggcagaggcagcagtccacgaacgtgtcgagaagtttcgaaaagacggccgcttcatc
ccagggacggacgcactctttggcaccagaccagagaagttggtgtacatcacgccaaag
cgtgtctcgcgtgatgcatgggatgatgttgtggaggctgttatagcgtatggcaagtcg
aggtcgaagaaatcttctgggcgaacggtagcagggcaggtggccaataaaatacaaggt
tattgggatgggcaggaggcgaggaaggataaggctcgggttcaggaggaacgtagattg
agggcgttggcaaagtcgacgattaggcaggtgattggggagtggaaaaaggctgttttc
catattcgagaacaagagaggatgaagcttgaagctgaggagctgaaacgagggcatgcg
catctagatgccatcctacatcagtcgggacacattttggaaactcagcagggtgatctc
gcacgaggggagatgcttgcctcgcgaagccgctcaagcagtgtttctgaccgttttcga
gattgggggtcggatgaggaggaagaggaggaggaagccgatgatggtcaagaggagcaa
ggcgaggaagaggaagaggaggagaagggccctgaaccggtgctggagggggaagaagac
gttgtaatgggcggatcggatgatgaggctcagtcctctatgctgctgccaagtcaaaaa
gtcactcgtaccttgacgccctccagtaccacatcaggtcctccagaagaagaagacgca
tcgactggacaacttttgcctgacgaacaacaccgtacaacaccgtcagacgatgagtcg
tcgattgcttcactggacgatctaatgattccagaccctgagagctctccgcgtcagata
cactcaaaccttgtgctcaacctgacggactacccagactccgactcatcgccttcaact
cctcgacccctgccctcagaagaaggaggtgaaatgttggatgagcctgagctcccgcgt
gctacttctgtctcatcatctcgtcgcactcctacctcttttgtagcggaaacccccgcc
gatgagcctgatgtgcctatgaataagccagacgttgagataccttcaccctcgagtcca
ggcgttggtcccagtgtagcgctggacaatcaggatcaggatgtcgaaacgcttgacaga
aacgagcccttacccttcgcgggtgaagaaatcccagatttacaacctgaggccaaggct
gaaatatttgaagagattcaggaggatgaactggatgcagaggcgccggagttgcagatt
cctgcgtacctcaagccatacgccgtcgcacctgtggattgggatccgtctgccaagatt
ttgcctcccctcctgcttcgtggcacactacggccgtaccaacaatctggattggaatgg
cttgtcagccttcatacgaggaatcacaatggtatacttgcggacgaaatgggtttgggg
aaaaccattcaaacaattgcgcttcttgcacaccttgcttgtgaccgtggtatttgggga
cctcatcttattattgtgcccaccagtgttctcctgaattgggaaatggagtttaagaaa
tttctgccagggtttagaatcctaagttatcatggatctaccaaaagaagaaaagaactt
cgccaagggtggaacgataaaagccatttcaatgtttgcatcacatcatacacccttgca
agcaaggacgcccatatcttcaaacgcaaagcttggtattatatgattcttgacgaggcg
cacatgatcaagaacttcaaatcgcagcgatggaacattctgctgatgttcagatcattt
cgacgtctcctcttgactggtacacccttgcaaaacaacctcactgagctttgggcgctg
ttgcagtttctaatgtcagggtctaactttgccaatgttaaagagtttgcgctttggttt
tctgcgcctttggaagctgctattgaaagagggggagccttggatgcggacacaacggaa
cgaattttaaagctgcacactgttttgcggccgtatctccttcgtcggatgaagcgagac
gtcgagaaggagcttccaagcaaatacgagcatctgctcctttgcccgctatcgaaacgt
cagagattcttgtacgacgaattcatgtctcgtgcacaaactcgagaatcgctgcaatca
ggagtataccaaaagattgcaaatattctgatgcagctgcgcaaagtttgcaatcatcca
gacctcttcgaagttcgacccattgtgacctcctttgctatgccacggtcggccatagcg
gatttcgaaatcaaagagttgttgattcgtaaacgtctgctcgctaatgatgatgatgag
aacatcaacctggattctctcggttttcgtttcatcgataggcaagacgagcccttgttg
actgccctagagacaaaacgcctcgatgcaacatcccatctaccacacttccttgatact
ccaggagagccacccccaaaggacactcgtactatcgccggattccgccgttactcggaa
tatttgcaacgggctaacaccattgcccgttggtcgcagattggacatctcaaccgcctt
cgctgtaaccaattccccatttatggtcaagagtgtatcacgacggtgcaaaagatgtgc
agaccaatcattcctctatccgacctcgacgttcgcttcaatcatctggatactgtctat
tcagtaaacgcagccgtcaagtcatatgtttcgcggggacaagagatggctggtttgatc
gaaaggtttgcctttgttactccgcctgttgtggcgttggatatgccccagatcgtgctc
tctggtcacgaagagctgcttgtcagccaaccgccatcattcgatgatctccttcatcac
gccagcgtcaaactccaaattgcctttccacatccaagtttgctgcagtatgattgcgga
aagcttcaggagttggcgaatcttttacgtgataagaaggctggcggccaccgtgtccta
atcttcactcaaatgaccaagatattggacatcctggaaatatttctgaatttccatggg
tatttgtatcttcgacttgacggtgctactaagattgaggacaggcagtacattactgag
cgcttcaacgctgatccaagggtattttgtttcatcgcgtcttcaagatcaggtggcgtt
ggcatcaatttaacgggcgctgataccgtggtcttctatgatagtgacttcaatcctcag
atggataggcagtgcgaggatagagctcatcgtattggtcaaatccgtgatgttcacatt
taccgctttgtctcacagcacaccgtcgaggaagcgatgctccgtaaggctaaccagaaa
cgatcattagacgatatcgtcatacagaagggggagtttgattggcgctctcttttcaat
gatgagggcgccttgaccgcagcgcttggtgatttcgaagacgctgaagatgctcatgct
gctgctgttgctgcgaaggaagaaaatgcaatggaaggcgctgatgaggaggattttgcc
gatactgctgatgccgctccaccagttcctgcgcctgacactgcaactgtttcacctcca
gaaaatgaacctaatcaggatggcactgtcaatgctgaaggagaggaggatcaagaggag
gaggaggagggcggtaccgttgtcgattatctcctcacgttcgcccagcgcgattgggaa
tttttcaaagaatggcgactgtag
DBGET
integrated database retrieval system
