Leptopilina boulardi: 127277234
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Entry
127277234 CDS
T08910
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6-like isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
lbd
Leptopilina boulardi
Pathway
lbd03015
mRNA surveillance pathway
lbd03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
lbd00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127277234
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
127277234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbd03019
]
127277234
Messenger RNA biogenesis [BR:
lbd03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
127277234
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
Motif
Other DBs
NCBI-GeneID:
127277234
NCBI-ProteinID:
XP_051154118
LinkDB
All DBs
Position
Unknown
AA seq
759 aa
AA seq
DB search
MADGDIDLYADDLEQDFAQDEFAGDGVDLYDDVIAAPPGGNGGVPNSERDRDNASPGEEA
NGNSAYHHGNNVQSGGGGRRHQLYVGNLTWWTSDQDISDSIQGVGVTDFIEVKFFENRAN
GQSKGFCVVSLGSEQSVRLCMDRLPKKELHGQSPVVTYPTKQALIQFESQCKTRPAPAPQ
QNQNQRSHSQHPPQMPPHQQHPQHQQHPQQNHGSRGVMMGPPPPGGPRQGQRMPPPGMGP
PGPQGPQGPPRMHGPSMGPCTININVNDPIPGHLNQGPPPPGYQQGPRYGPRPNGPPRGP
NGPGVPPQQGMPGHGQRPPPGMPFHGGPPGPPGQGPPRVPHGHPGPPPGDPRGAPPRGPE
WNRPPGMHPGAQGPPGFPQHQHMQGPPQRGPPPGSMGGEHHTNRMMPGPGGIPPGHGLPP
QGPPQGPPGGPAPHVNPAFFQQGPPHQQGPPGPIHGPPHGPSHGPPHGPPHPQPHGPPHG
PPHNYGPPAAQPAYGAPAPDHRADVAPPLSEQEFEEIMGRNRTVSSSAIARAVSDAAAGE
YASAIETLVTAISLIKQSKVAADDRCKILISSLQDTLRGLETKGYGSSRRERSRSRERER
SHRRRRERTRSRDREYRERSRERDRDRERDRDRERDRDRDRERYYNETYPRERSRSRERD
RERDREREYRERSREDATTHATTRPRVKEEPTETPSVSSSKTSRYYDDRYRERDRERERE
RESTRRPAEREREREPERERERERDRRDERADSSHRSRH
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atggctgatggtgacattgatttgtatgccgacgatcttgagcaagattttgcacaggat
gagtttgctggagatggtgtcgatttatacgacgatgtgatagcagctcctccaggtgga
aatggcggcgtaccgaacagtgagagagatagagataacgcctcaccgggcgaggaagct
aatggtaattccgcttatcaccatggaaacaatgttcaatccggtggtggtggaaggcgt
catcaattatatgtcggaaatttgacctggtggaccagtgatcaagatatctcagattca
atacaaggcgttggtgtcactgatttcattgaagtaaaattctttgaaaacagagctaat
ggacaatctaaaggcttttgtgttgtttctttgggctctgagcaaagcgtaagattatgt
atggatcgattgccaaagaaagaattacatggacaaagtccagttgtaacgtatcccact
aaacaagcattaatccagtttgaatcgcagtgtaaaacaagaccagcgcctgcacctcaa
caaaatcaaaatcaacgttcacatagtcaacatccaccacaaatgccaccgcatcaacag
catccacaacatcagcaacatccgcaacaaaatcatggatcaagaggtgtaatgatgggt
ccaccacctccaggtggtccaagacaaggccaaagaatgccaccgccaggaatgggacca
ccaggtcctcagggaccacagggtccaccaagaatgcatggtccatcaatgggaccatgc
acaattaacatcaatgtcaatgatcctattcctggtcatcttaatcaaggaccacctccg
cctggttatcagcagggtcctagatatggtccaagaccaaatggacctcctcgtggacct
aatggaccaggagtaccaccgcaacaaggaatgcccggtcatggtcaacgtccaccacca
ggaatgccattccatggaggcccaccaggacctccaggtcaaggacctcctcgtgtacca
catggacatccaggacctcctccaggtgacccgagaggagctccacctcgaggacctgaa
tggaatcgtccaccaggaatgcatcctggagctcagggaccacctggtttccctcaacat
caacatatgcaaggtccaccacaaagaggacctccaccaggttctatgggtggtgagcat
cacactaatagaatgatgccaggacctggaggaattccacctggtcatggattaccaccg
caaggaccaccacaaggaccacctggtggaccagctcctcatgttaatcctgcatttttc
caacaaggacctccacatcaacaaggtccacctggaccaattcatgggcctcctcacgga
ccctcacacggtccacctcatggtcctccacatcctcaacctcatggaccaccgcatgga
cctcctcacaattatggtccacctgcagctcagccagcatatggtgcgccggctcctgat
catcgagctgatgttgctccacctctcagcgaacaagaatttgaagagattatgggacgt
aatcgaacagtttcatcgtcggcaatagccagggctgtttcggatgctgctgcaggagaa
tatgcaagtgcgattgaaacattagtcactgccatatcgttgataaaacaatctaaagtc
gctgctgatgatcgatgtaaaattctcatcagttctcttcaagatacattaagaggattg
gaaacaaagggctacggatcatccagaagagaacggtcaagatcccgtgaacgtgaaaga
agtcatagaagacgtcgtgaacgaacaagaagtcgcgatcgagaatatcgggaacgaagt
cgtgaacgagatcgagatcgtgaaagagatcgtgatcgtgaacgcgatagagatcgtgac
agggagcgttattataatgaaacttatcccagagagagatcacgtagcagagaacgtgat
cgtgaacgtgatcgtgaacgggaatatagagagagaagcagagaggatgctacaacacat
gcaactacaaggccgagagtaaaggaagaaccaacagagacgccatccgtctcatcttct
aagacatctaggtattacgacgatagatacagagaacgagatcgtgaaagagaacgtgaa
agagaatcaactcgaagaccagcggaaagagaacgtgaacgtgaacctgaacgggaaaga
gaacgagaacgcgatcgccgtgacgagagagcagattcatcacatcggtctcgacactga
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