Leptopilina boulardi: 127278264
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Entry
127278264 CDS
T08910
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
lbd
Leptopilina boulardi
Pathway
lbd03020
RNA polymerase
lbd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lbd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
127278264
09124 Replication and repair
03420 Nucleotide excision repair
127278264
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbd03021
]
127278264
03400 DNA repair and recombination proteins [BR:
lbd03400
]
127278264
Enzymes [BR:
lbd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
127278264
Transcription machinery [BR:
lbd03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
127278264
DNA repair and recombination proteins [BR:
lbd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
127278264
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
DUF3137
NTF2
Motif
Other DBs
NCBI-GeneID:
127278264
NCBI-ProteinID:
XP_051155839
LinkDB
All DBs
Position
Unknown
AA seq
1907 aa
AA seq
DB search
MTTFESKMPVRFVKRVQFGILSPDEIRRMSVTDGGIRFSETMEGGRPKQGGLMDPRQGVI
DRNSRCQTCAGNLTECPGHFGHITLAKPVFHIGFITKSMKILRCVCFFCSKLLVSPNNPK
IKEIVMKTKGQPRKRLTFVYDLCKSKNICEGGDEMDINKDGTEIPLADRKPGHGGCGRYQ
PSLRRSGLDITAEWKQINEDSQEKKMPLTAERAHEILKQITDEESFILGMDPSYARPDWM
IVTVLPVPPLSVRPAVIMYGSARNQDDLTHKLSDIIKTNNELIRSEEKGAATHIVSEIIK
MLQFHVATLVDNDLPGLPRAMQKSGKPLKAVKARLKGKEGRIRGNLMGKRVDFSARTVIT
PDPNLRIDQVGVPRSIAQNLTFPEIVTPFNIDKMQELVRRGNSQYPGAKYIVRDSGERID
LRFHPKASDLHLQCGYKVERHIRDGDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSC
TSPYNADFDGDEMNLHVPQSMETRAEVENIHVTPRQIITPQANKPVMGIVQDTLMAVRKM
TKRDVFIEKEQMMNILMFLPSWDGKMPQPCILKPKPLWTGKQIFSLIIPGNVNMIRTHST
HPDEEDDGPYKWISPGDTKVMVEHGELIMGILCKKTLGSSAGSLLHICMLELGHEVCGRF
YGNIQTVINNWLLLEGHSIGIGDTIADPQTYLEIQKAIKKAKEDVIEVIQKAHNMELEPT
PGNTLRQTFENQVNRILNDARDKTGGSAKKSLTEYNNLKAMVVSGSKGSNINISQVIACV
GQQNVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFYFHAMGGREGLI
DTAVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGEDGLCGEAVEFQNLPT
IKLSNKAFEKKFKFDPTNERYLRRIFNEDIVREMMGSGEVISELEKEWEQLSRDRSALRE
IFPSGESKVVLPCNLQRMIWNVQKIFHINKRSPTDLSPMRVIQGVKDLLEKCVIVAGEDR
LSKQANENATLLFQCLVRSTLCTKCVSEDFRLSSEAFEWLIGEIEARFHQAQVSPGEMVG
ALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGAAA
RDAEKAKNVLCRLEHTTLKKVTANTAIYYDPDPQNTVIAEDQEFVNVYYEMPDFDPTRIS
PWLLRIELDRKRMTDKKLSMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIMNSDDNK
FQDNDKESIDKMEDDTFLRCIESNMLSEMTLQGVEAIGKVYMHLPQTDAKKRIVVTDTGE
FKAIAEWLLETDGTSLMKVLSERDVDPVRTFSNDICETFEVLGIEAVRKSIEKEMNTVLQ
FYGLYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLLDAASHAE
TDPMRGVSENIIMGQLPRIGTGCFDLLLDAEKCKSGMEIPMATGANLMGGTGMFYGTAAT
SSMSPRMTPWNQIGATPAYGASSMSPALESGMTPGAGCFSPSGASDASGMSPAYSAYSPQ
PGSPGSPGPSMSPYPMSPAGGASPSYSPTSPAYLPTSPSMTPSSPNYSPTSPSYSPTSPN
YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT
SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNY
TPASPSYSPTSPSYSPSSPQYSPASPSYSPSSPKYSPTSPSYSPTSPSFAGTSPRYTPAS
PTYSPTSPSYSPTSPSYSPSSPQHTPGGSTRYSPSSPNYSPTSPTYSPSSPQYSPSSTKY
SPTSPTYTPTSPSYSPTSPTYSPPVPGYSPTSPTYSPASPAYETDDS
NT seq
5724 nt
NT seq
+upstream
nt +downstream
nt
atgactacttttgaatctaaaatgcctgtacgctttgtaaagcgagtacagtttggtatt
ctttcacctgatgaaatacgacgtatgtctgtcactgatggtggaattcgtttttctgaa
actatggaaggtggccgacctaaacaaggtggtctcatggatccaagacaaggtgtaatt
gataggaattcacgttgtcaaacatgtgctggcaatcttacagaatgtcctggacacttt
ggtcatatcactttagcaaaaccagtatttcacattggttttatcacaaaatctatgaaa
attctcagatgcgtgtgttttttctgttcaaaacttttagttagtccaaataatccaaaa
atcaaagaaatcgtcatgaagacaaaaggacagccacgaaaacgtctcacatttgtctac
gatttatgtaaaagtaaaaatatttgcgaaggtggcgacgaaatggacattaacaaagat
ggcactgaaattccattagccgatagaaaaccaggacacggtggttgtggtcgttatcaa
ccgagtttaagaagatctggcctcgacataacagccgaatggaaacaaattaatgaagac
tcacaggagaaaaaaatgccattaactgccgaaagagcacatgaaattctcaaacaaatt
actgacgaagaatcatttattcttggtatggatccaagttatgcgcgtcccgattggatg
attgtcactgttcttccagtgccaccattatctgtacgaccagctgtcattatgtacgga
tcagcgagaaatcaagatgatttaacgcataaattgtctgatataataaaaacaaataat
gaattgatacgaagcgaagagaaaggtgccgcaacacatattgtttcggaaataataaaa
atgttacaatttcacgttgctacattggttgataacgatttgcctggattgccgcgtgca
atgcaaaaatcaggaaaaccactcaaggccgtcaaggcacgactcaaaggcaaggaagga
cgaattcgtggtaatttgatgggtaaacgtgttgatttctcagcgagaactgtcatcaca
ccggatccaaatcttcgtattgatcaagttggtgttccacgaagtattgcacaaaattta
acattccccgaaatagtgacaccgtttaatattgataaaatgcaagaacttgtaagaaga
ggtaattcacaatatcctggtgcaaaatatattgtgagagacagcggcgaacgaatagat
cttcgatttcatccaaaggcatctgatcttcatcttcagtgtggttataaagttgagagg
cacattagagatggtgatttggttatatttaatcgtcagccaactcttcataaaatgagt
atgatgggacatagagtgaaagttttaccatggagtacatttcgtatgaatctcagttgt
acatctccctacaatgccgattttgatggcgatgaaatgaacttacacgttccacaatca
atggaaacaagagctgaagtggaaaatattcacgttacaccacgtcaaattattacaccg
caagctaataaaccagtaatgggtattgtgcaggacacattgatggctgtgagaaaaatg
acaaaaagagatgttttcattgagaaggaacaaatgatgaacattttaatgtttttgcca
agttgggatggaaaaatgcctcaaccttgtatacttaaaccaaaacctctatggacggga
aagcaaatattttcattgattattccaggcaatgtgaatatgatacgtacccacagtaca
catccggatgaagaggatgatggaccatataaatggatttcgcctggtgatacaaaagta
atggtcgagcatggtgagcttatcatgggaattttgtgtaaaaaaacacttggttcatcg
gctggttcacttttgcatatttgcatgttggaattaggtcacgaggtgtgtggtcgattt
tacggaaatattcaaactgtcattaataattggttattattggagggtcattcaattggt
attggtgatacaattgccgatcctcaaacatatttggaaattcaaaaagcaattaagaaa
gcaaaagaggatgtcattgaagttattcaaaaagctcacaatatggaattggaaccaacg
cctggtaatacattgaggcaaacttttgaaaatcaagtaaacagaattttaaatgacgct
cgtgataaaactggaggttcagcgaaaaaatcattgactgaatataataatttaaaggct
atggtggtctcaggatcaaagggttcgaatattaatatctcgcaagttattgcttgtgtg
ggacaacagaacgttgagggtaagcgtataccatttggttttcgtaaacgaacattacca
catttcatcaaggacgattatggtcccgaatcgagaggattcgtcgaaaattcgtatctt
gctggtcttacgccttcggaattttattttcacgctatgggaggtcgtgaaggtcttatt
gatacggctgtaaaaactgctgaaactggatacattcagcgtcgtttaatcaaggctatg
gagtccgtaatggtgcattatgatggaactgtgagaaattctgttggacagttaattcag
ttacgttatggagaagatggtttgtgtggagaagctgttgaatttcaaaatttgcctaca
attaaattgagtaacaaagcatttgaaaagaaattcaaattcgatccaacaaacgaaaga
tatttgcgtcgtattttcaatgaagacattgttcgtgagatgatgggctccggtgaagtg
atttctgaattggaaaaagaatgggaacaattgagtagagatcgatcggctttgagagaa
attttccccagtggagagtcaaaagttgtattaccttgtaatttgcaacgtatgatttgg
aatgtacagaaaatctttcatattaataaacgatcgccaactgatttgagtccaatgaga
gttattcaaggtgtgaaggatcttttggaaaaatgtgtaattgtcgctggtgaggataga
ttgagtaagcaagccaatgaaaatgccacactacttttccaatgtctcgtcagatcaact
ttgtgtaccaagtgtgtgtctgaagatttccgattatcgagtgaagcattcgaatggtta
attggagaaattgaggcaagattccatcaggcacaagtgtcaccgggtgaaatggtggga
gcattggctgcacaatctcttggtgaacctgccactcagatgacgttgaacactttccat
tttgctggtgtatcatcaaagaacgtaaccctgggagtgccgcgtctaaaggaaattatt
aacataagtaaaaagccaaaagctccttctctaactgtttttctaactggagcggcagca
agagatgcagagaaagcaaagaatgttctctgtcgcttggaacatacaacattgaagaaa
gtaacggcaaacacggcaatttattatgatcctgatccacaaaatactgtcattgccgag
gatcaagaattcgtaaatgtctattacgaaatgcccgactttgatccaacaagaatttca
ccttggctacttcgcattgaattggatagaaagagaatgactgacaagaaacttagcatg
gaacaaattgctgaaaaaatcaatgctggatttggtgatgatttaaattgtatatttaat
gacgataatgccgaaaaattggttctacgaattcgaataatgaatagtgatgacaacaaa
tttcaagacaacgacaaggagtctatagacaaaatggaagatgacacattcctgagatgt
attgaatcgaacatgttgagtgaaatgacactgcaaggagttgaagcaattggtaaagtt
tacatgcatttgcctcagacagacgcaaagaagaggattgtcgtgactgatactggagag
tttaaggcgattgctgaatggttactggaaactgatggtacaagtttgatgaaggtattg
agtgagagagatgtagatcctgtgaggacatttagtaacgatatttgtgagactttcgaa
gtattgggtattgaggctgttagaaagtcaatagagaaggaaatgaacactgtattgcag
ttttatggactttacgtcaattatcgacatcttgcgttactttgtgacgttatgacagcc
aaaggtcatcttatggccatcactcgtcacggtattaacagacaggatactggagcactt
atgagatgttccttcgaagaaactgtggatgttttgcttgacgctgcttctcacgcagaa
accgatcctatgagaggtgtttctgaaaatattattatgggacaattacctcgaattggc
acaggttgttttgatttattactcgacgctgagaagtgtaaatcaggcatggaaattccc
atggctactggagcaaatctaatgggcggaacgggaatgttctacggaactgcagcgaca
tcgagtatgagtccacgtatgacaccttggaatcaaataggagcaactccagcttacggt
gcttccagtatgtcacctgcacttgaaagtggaatgacacctggagctggatgtttctca
ccctccggagcgtcagatgcatcaggaatgtcgcccgcttattctgcttattctccacaa
cctggcagtcctggtagtccaggaccaagtatgagtccgtatccaatgtcgccagcgggt
ggtgcatcgccaagttattcaccaacatcgccagcatatttgccaacatcaccaagtatg
acaccgtcaagtccaaattattctccaacaagtccaagttattcgccaacaagtccaaat
tattcaccaactagtccaagttattcgccgacgagtccaagttactcgccaacgagtcca
agttattcacccacgagtcccagttactcgcccacaagtccaagttactcgcctacgagt
ccaagttattcacccacgagtcccagttactcgcccacaagtccaagttactcgcctacg
agtccaagttactcacctacgagtccaagttactcgccgacgagtccaagttactcacca
acgagtcccagttattcaccgacaagtccaagttactcgcctacgagtccaagttattca
ccgacgagtccaagttactcgccaacaagtccgagctattcgcccagttctccaaattac
acacctgcatctccatcatattctccgacaagtccttcttattcgccaagttcaccacaa
tattcaccggcgagtccaagctactctccaagtagtccaaaatattcaccaacaagtccc
agttattcacccacatcaccatcattcgctggtacatcaccacgctatacaccagcgagt
cccacttattcaccgacaagtccatcatattctccaacgagtccaagttattcaccaagt
tcaccgcaacatacaccaggtggtagtacaagatattcgcccagcagtccaaattattcg
ccaacgtcaccaacttattctccatcgagtcctcaatactcgccatcaagcaccaaatat
tctccaacaagtccaacttacactcccacaagtcccagttattcaccaacgagtccaact
tattctcctcctgtcccaggatattcacccacaagtcctacttattcaccagcatcgcca
gcttacgaaaccgatgactcttaa
DBGET
integrated database retrieval system
