Leptopilina boulardi: 127278372
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Entry
127278372 CDS
T08910
Name
(RefSeq) pre-piRNA 3'-exonuclease trimmer-like
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
lbd
Leptopilina boulardi
Pathway
lbd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lbd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127278372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbd03019
]
127278372
Enzymes [BR:
lbd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
127278372
Messenger RNA biogenesis [BR:
lbd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
127278372
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
RNA_bind
Motif
Other DBs
NCBI-GeneID:
127278372
NCBI-ProteinID:
XP_051156034
LinkDB
All DBs
Position
Unknown
AA seq
533 aa
AA seq
DB search
MIEVTDQNFEILYPKIEETLKNATFFSMDTEFSGIKTDFFVKESLFDSPNERYAKLKNNI
KPFIIIQFGLTAFQHVREQNTYNAQTFSFYLLPRSIPSKNRHFLWQITSLEFLSIYKFDF
NKFAYDGISYLNEVDEIDLKNNLQEDILMQNLERLLCNRDADELKNSRNVVADWLIQKIE
PPAVLEIVSESQFLQYLMEKELRNQFPDIWTYSGKKTVTVMRIGKDERQELELKEKGRLE
EKLLNYYIGFSKVFKLLVKLKKPIVGHNSLVDLMYMHQQFYKPLPKKYTIFKKNIHELFP
TVFDTKFLSYEIRNFLKKEEKFSSNSLNTLYYYFKNEKGRFLSLHSPKICSETYLKNDED
KFHDAGWDSYCAGYCFIRLAHIFAAKKRGEGSNYKPMTNIEILNGVKSFSNRINIIRGNV
PYLNFGGPDPVSERPQWLVVQPKGSKTFCVSEIAELLSSYGSVDVKPFNSRYALVAVSNH
RSARDILQHFKSHAEIQILFYNPVRHSTKVKIFCWSSLIISGCIISLILHRRS
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagtaactgatcaaaatttcgagatactatatcctaaaatagaagaaacttta
aagaatgctacatttttttctatggacacagaatttagcggcattaagacagatttcttc
gtgaaagagagcctatttgattcgccaaatgaacgatatgcaaaattaaagaacaatatt
aaaccatttattataattcaatttggtctcacagcatttcaacatgttcgggaacaaaat
acatataatgcccaaacatttagcttctatctcttaccacgatcgattccatcaaaaaat
agacattttctttggcaaattacgtcccttgaatttttatccatttataaatttgatttc
aacaaatttgcttacgatgggatctcatacttaaatgaagtagatgaaattgatttaaaa
aataatttacaagaagatattttaatgcaaaatttagaacgattactttgcaatcgagat
gcagacgaattgaaaaattctcgtaatgttgttgctgattggttgattcaaaaaattgaa
cctcccgctgtattggaaattgtttcagaatcacaatttttacagtatcttatggaaaaa
gaacttagaaatcaatttccagatatttggacatattctggaaagaagacagtgactgtt
atgagaattggaaaggatgaacgacaagaattggaattaaaagaaaaaggaagacttgag
gaaaaactattaaattactatattggattttctaaagtttttaaacttctagtcaagtta
aaaaaaccaattgttggacataatagtttagtagatttaatgtatatgcatcaacaattt
tataaacctttaccaaagaaatatacaattttcaagaagaatattcatgaactttttcca
actgtttttgatacaaaatttcttagttacgagataagaaattttttaaaaaaggaagag
aaattttcttctaattcactcaacactttgtattattatttcaaaaatgagaagggaaga
tttttgtctttacactcgccgaaaatatgctcagaaacatatttaaaaaatgatgaggat
aaatttcatgatgcaggatgggattcatattgtgctggatattgttttatacgattggca
catatatttgctgcaaagaaacgtggagaaggaagcaattacaaaccaatgactaatatt
gaaattttaaatggagtaaagtcttttagcaatcgtataaatattattcgaggaaatgta
ccttatttgaatttcggtggacctgatccagtttcagagagacctcaatggctagttgta
cagccaaaaggttcaaaaacattttgcgtttctgagatcgcagaattattatcatcctat
ggtagtgttgatgttaaaccatttaattcgcgctatgctctagtcgctgtctctaatcat
cgaagtgctcgagatattttacaacactttaagtcacatgcagaaattcagattttattt
tacaatccagttcgacattccacaaaagtgaaaatcttctgttggtccagcttaattatt
tctggatgtattatctctttaatattgcatcggagaagttaa
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