Leptopilina boulardi: 127278839
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Entry
127278839 CDS
T08910
Name
(RefSeq) CCR4-NOT transcription complex subunit 2
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
lbd
Leptopilina boulardi
Pathway
lbd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lbd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127278839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbd03019
]
127278839
Messenger RNA biogenesis [BR:
lbd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127278839
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
127278839
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
127278839
NCBI-ProteinID:
XP_051156720
LinkDB
All DBs
Position
Unknown
AA seq
461 aa
AA seq
DB search
MANLNFEQPPRSIANASLATRGGGGGGLSSTTLTGHVTPTSGMFSGSSASTSSTANISVI
GPNVYPGATGSGGVQPAGHQSQQQLSPMGSRGLFSQRAFTDRRTMPALGNSNPMGSMGSF
GIPPSRNYGSQGAINNFHSVFGSGGGGDTSTPPLLDLSEFPSLTNRGQGDSMPQPSPMPG
KQPYVGMVKQPTSEPSEFTMSSEDFPALPGTQSREGPSPGGGVSGDKGMSVGLGPEISQD
ILQVNRAPGSEKLQTSKRGIQTSPDGKVTNIPSSMVKDQFGMVGLLTFIRASETDPNLVS
LALGQDLTALGLNLNSPENLYQNFGGPWAETSCRPQDIDFHVPPEYLINASIRDKLAPVK
LNRYKDDLLFYMFYTNVGDVLQLAAAAELYSREWRYHTEEKVWITQAPGLGLVEKTSTYE
RGTYYYFDAQNWRKVAKEFHLDYSKLESRPHLPPTFHQAQP
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggccaacctgaactttgagcaaccacctcggagtatcgcaaacgcaagtctagctaca
cgtgggggtggtggggggggattaagctcgacgaccctcacgggtcatgtcacacctacc
tcgggcatgttctcaggctcatcagcaagcacctcgagtacagcgaacatctcggttatt
ggtccgaacgtctatcctggagcaactggttcaggaggcgttcagcctgctgggcatcaa
tctcaacagcaactttcgcctatgggaagtaggggactctttagtcaaagggctttcact
gataggcgtacaatgccagctcttggaaattctaatccaatgggtagcatgggcagtttt
ggaatacctccaagccgcaattacggatctcaaggagcgatcaacaatttccattcggta
tttggcagcgggggtggcggcgataccagtacacctccacttttggacctttcagaattt
ccctcattgaccaatcgaggtcagggtgattctatgcctcaacctagtcccatgccaggg
aagcaaccttatgtcggtatggtgaaacaaccaacgtctgaaccgagtgaattcacaatg
agctcggaagattttccagctctaccgggaactcaaagtagggaaggaccgtcccctggt
ggtggcgtgtccggtgataaaggtatgtctgttggtcttggtccagaaattagtcaagac
attttacaagtcaacagagccccaggctcggaaaaattacagacatctaaaagaggaatc
caaacgtctcctgacggtaaagtaacaaatataccatccagtatggtcaaagatcaattt
ggaatggtgggactcttaacgtttattagagcatcagaaacagatccaaatcttgtatct
ttggcgttaggacaagatctcactgcactaggacttaatcttaattcaccggaaaatctt
tatcagaattttggaggtccttgggcagaaacatcttgtcggccacaagacattgacttt
cacgttccaccagagtatctcataaacgcttcgatcagggataaactggctcctgttaaa
ttaaatcggtataaagacgatctcctattttatatgttttatacgaatgttggagatgta
ttacaactagctgcggcagcagaactttacagtagagaatggcggtatcacacggaggaa
aaagtttggataacacaagcacccggtctaggactagtcgaaaaaacgtcgacgtacgag
cgtggtacttattattattttgatgcacaaaactggaggaaggtagctaaagagttccat
ttagattattcgaaattggaaagtagacctcatcttcctccaacgttccatcaagctcag
ccttga
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