Leptopilina boulardi: 127280077
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Entry
127280077 CDS
T08910
Name
(RefSeq) collagen alpha-1(I) chain
KO
K06237
collagen type IV alpha
Organism
lbd
Leptopilina boulardi
Pathway
lbd04512
ECM-receptor interaction
lbd04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lbd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127280077
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
127280077
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lbd04147
]
127280077
00536 Glycosaminoglycan binding proteins [BR:
lbd00536
]
127280077
Exosome [BR:
lbd04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
127280077
Glycosaminoglycan binding proteins [BR:
lbd00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
127280077
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
127280077
NCBI-ProteinID:
XP_051158802
LinkDB
All DBs
Position
Unknown
AA seq
1846 aa
AA seq
DB search
MRPKGRILIFKVLDFLWIIGGVFFILSTGWINGVESVICRDGEKCNCTGIKGEPGHFGIP
GGIGPQGLPGEVGPDGPAGPKGEKGAAGEHGSTGEKGYRGDTGARGFVGDAGRPGMIGNA
GLSGPDGLEGCNGTDGTMGGPGRSGHYGERGLPGAPGSYGPRGEPGEGGVNSKGSKGIRG
EFGTDGLKGFPGQIGYTGDIGLPGERGDPGYDGFPGEQGPIGEPGEPGIGIQGFQGDMGD
TGEPGQDFLPWTIINQTVLQGKRGPPGPKGDSGSYGRPGLPGVKGPQGRSGLHGFKGVKG
EQGDDGPRGKQGVTGPEGPAGEKGEKGAPGFEGRPGSDGFDGEAGEDGNAGPPGKQGAEG
EKGAYIPELDEMVPGSIGPQGDLGPHGEQGESGTPGLAGNVGYIGPAGPPGPPGMPGIPG
KKGTSEKGERGDDAPSGPRGPIGPPGYQGLPGIVGDKGFPGLAIVGPPGQEGKRGFDGYH
GLPGDRGDPGPPGEKGFPGKGVRIRGPPGESGLPGIPGSAGKPGIPGLPGFKGGRGFRGD
DCGVCTPGLPGLKGEQGESGRQGFAGTPGYPGFPGPRGQKGVHGNSGVVGPPGLEGTSGR
TGIAGVTGPKGEPGRIIWPPQNKTEILYAMGDKGDKGLPGPEGLMGPVGRPGLPGDEGMQ
GPNGAKGEHGMPGLPGRDGVPGKFGRDGEKGDSASVEIYLLRGDAGLPGLPGRKGERGIV
GVKGERGISASAIFENIKGLRGYKGENGEAGFDGYKGFKGRVGDVGFVGLPGPPGPPGFS
FQGPHGLKGYPGMPGEEGPRGTPGQPGLMGPEGYPGFLGQKGERGDPGSNLIYGDIGEMG
VYGEKGEYGEAGPRGYSGRAGYDGPKGMRGAKGAPGFTGLSGLQGSKGSRGDSIQGSRGM
PGIPGAPGFRGIPGDVGYKGSDGAPGFSGMKGLKGDTGYPGRRGEDGATGIIGFRGMNGA
PGLPGLPGMEGDVGLRGESGPPGRQGLDGADGEVGIKGERGDTGPEGLMGPDGPPGFKGV
IGDIGPDGPDGPRGENAFSGPQGDKGEPGFMGEVGSPGRPGIDGRPGLPGEPGMAKDGFD
GLKGEQGEPGFDGIDGLRGLKGEIGDMGLDGDKGERGDDGIKGWPGKPGLHGRYGEKGKR
GPMGPAGFEGLKGKRGLDGDPGLMGRPGMPGDIGPVGYPGVSGPRGRKGQIGEPGIAPYL
IGTKGDFGIPGMHGFPGRKGERGEAGYPGYAGLKGMEGDIGFRGADGFPGLEGLPGLPGD
QGMPGMPGLSGQFAEPGEPGRDGLDGQPGIPGRPGQKGAPGEYGPNGPKGIHGDEGEIIP
GPKGIRGDVGHRGYVGFPGEPGLPGQPGFPGPVGPKGYRGEPGTSEFSHKGERGDAGLLG
LDGLHGPKGMRGDTGYAGRPGIPGAKGERGIDGHHGLPGPPGPPGPQGMKGHRGLLPFPA
VPRPGLPGDDGPPGLPGLSGRKGESGEPGEDGLPGRIGERGMDGPIGPPGQPGRDGPNGF
QGPPGTDGRPGSPGYPGEAGEPAPRPRGPQNRGFFFARHSQSEMIPTCPKNTVKLWDGFS
LLHIMGNGHPWAQDLGQAGSCLRKFSTMPFSVCNLNDVCDYAQRNDYSYWLSSTEPMPMM
MTPIPAPEVGRYISRCSVCEAPTRLIAIHSQTMDIPQCPGGWEEAWVGYSFLMHRDSGAA
GGGQSLVSPGSCLEEFRTRPFIECRGLGTCNYFGTAISYWLATVKDYEQFRKPLQQTLKA
DHTSRVSRCAVCRRRLVNEDYSHTYPLNTLRENRYPQSVYPESREESDRTFISNNNIPPR
IQNRPYEWQRNQRPAQQRHPYRQRHHQNPRRNRIHTSETDPQSNYT
NT seq
5541 nt
NT seq
+upstream
nt +downstream
nt
atgcggccaaagggtcgcatcttaatattcaaagttctggattttttatggatcattgga
ggtgtgtttttcattctatcaacgggatggattaatggtgttgagagtgtgatatgcaga
gacggtgaaaaatgtaattgtacgggaataaaaggtgagcctggacattttggaattcca
ggaggaattggacctcaaggattgccgggagaagttggtccagatgggccagcgggacca
aaaggcgaaaaaggagctgccggagaacatggaagcacaggagaaaaaggttaccgagga
gacactggagcgagaggatttgtcggagacgctggaagacctggaatgattggaaacgct
ggattaagtggtccagatggtttagaaggttgtaatggaactgatggaacaatgggagga
cccggaagatcaggacattatggagaacgaggtcttcctggtgctccaggaagttatgga
ccacgtggtgaacccggtgaaggtggtgtcaattcaaagggaagcaaaggaataagaggc
gaatttggaaccgatggtctaaaaggttttccaggacagattggctatacgggcgatatt
ggacttccaggagagagaggtgatccgggttatgatggatttcctggagaacagggacca
attggagaaccaggtgaaccgggtattggaatacagggatttcaaggtgacatgggagac
accggagagcctggacaagattttttaccatggacaataataaatcagacagtattgcaa
ggaaaacgaggacctccaggaccaaaaggtgatagtggcagttacggtcgtcctggttta
ccaggtgttaaaggaccgcagggtcgttcgggtctacatggttttaaaggagtaaaggga
gaacaaggagacgatggaccaagaggcaagcaaggtgttaccggtccagaaggtcctgcc
ggtgaaaaaggagaaaaaggagctccaggttttgaaggacgaccgggatccgatggtttt
gatggagaagcgggagaagatggtaatgctggaccacctggaaaacaaggagcagaaggt
gaaaaaggcgcgtacattccagaactcgatgaaatggttcccggaagtattggacctcaa
ggagatttaggaccgcacggtgaacaaggagaatcaggaactccaggattagcgggaaat
gtgggatatattggaccagcaggacctccgggacctccaggtatgcctggaattccggga
aaaaagggaacatctgagaaaggagaacgaggcgacgatgctccatctggaccaagggga
ccaataggtcctccaggttatcaaggactacccggaattgttggagataaaggatttcct
ggtttagcaattgttggaccacctggacaagagggaaaacgaggttttgatggttatcat
ggacttcctggagatcgtggcgatcctggtccaccgggcgagaaaggttttccgggtaaa
ggtgttagaattcgaggaccgcctggcgaaagtggtcttccaggaattccaggttctgca
ggaaaaccaggtattccaggacttccgggatttaaaggcggaagaggttttcgaggagac
gactgtggcgtttgtacaccaggattacctggactaaaaggtgagcagggtgaaagtgga
aggcaaggatttgctggaactccgggctatccaggatttccaggaccaagaggacaaaaa
ggtgttcatggaaattctggcgttgtgggtccaccaggtttggaaggtaccagcggaaga
actggaatcgctggtgttactggtcccaaaggtgaaccgggaagaattatttggccaccg
caaaataaaactgaaattttatacgcaatgggcgacaaaggtgataagggtcttcctgga
cctgaaggtctcatgggtcctgttggtcgtcctggtttacctggtgacgagggtatgcaa
ggacccaacggcgccaagggtgaacatggaatgcctggattaccgggtagagatggagta
ccaggaaaatttggccgtgacggtgaaaagggagattctgcttctgttgaaatttatcta
ttgcgaggtgatgcaggtttacctggtttaccaggtcgcaaaggtgaacgtggtatcgtt
ggcgttaaaggtgaacggggaatttcagcatcggcaattttcgaaaatatcaaagggctt
agaggctataagggagaaaatggagaagcaggatttgatggctacaaaggttttaaggga
cgagtgggcgacgtaggatttgtaggattaccaggacctcctggaccacctggtttctca
tttcaaggtccacatggtctaaagggctatcctggaatgccaggcgaagaaggaccacgt
ggtacacctggacaaccgggtctcatgggtcctgaaggatatccaggttttctgggacag
aagggagaacgtggtgatccaggctcaaatttaatatacggtgatattggagaaatgggt
gtttatggagaaaagggagaatacggtgaagctggtccacgtggatattcaggaagagct
ggttacgatggaccaaaaggaatgagaggtgctaaaggggcaccgggttttactggacta
agtggactacagggatcaaagggatcgagaggtgacagtattcaaggatcaagaggaatg
cccggaattccaggtgcacctggatttagaggaattccaggagacgttggttataaagga
tctgacggtgcgccaggatttagtggaatgaaaggattgaagggcgacacaggttatcct
ggacgtcgtggtgaggatggagcaacgggaataataggattcagaggaatgaatggtgca
ccaggtttacctggtcttcctggaatggaaggcgatgttggattgcgaggggaatctgga
ccaccaggaagacaaggtttagatggcgccgatggtgaagtgggaattaaaggagaacgt
ggtgacactggacccgaaggacttatgggacctgatggtccacctggttttaagggtgtt
attggtgatatcggacccgatggaccggatggaccgagaggagagaatgcgtttagtgga
cctcagggcgataagggtgagcctggattcatgggcgaagttggatcgccaggtcgtccg
ggaattgacggtcgacctggtcttccaggtgagccaggaatggcaaaggacggtttcgat
ggtttgaagggagaacaaggagagccgggttttgatggtatcgatggacttcgaggactt
aaaggggaaattggagatatgggtttggatggtgataaaggagaaagaggcgatgatgga
attaaaggttggccaggaaagcctggattacacggaagatatggagagaaaggtaaacgg
ggaccaatgggaccagcaggttttgaaggtttgaaaggtaaacgcggcttggatggagat
ccgggtctaatgggacgaccgggaatgcccggagatattggtcctgtaggatatccaggt
gtttcaggtcctcgcggtcgtaaaggtcaaattggtgaacctggaatagctccatatttg
ataggtacgaaaggcgattttggtattcctggaatgcatggattccccggaagaaaagga
gaaagaggagaagccggttatcctggatatgctggtctaaagggaatggaaggtgacata
ggattccgaggagctgatggatttccaggacttgaaggacttcctggtcttcctggagat
caaggaatgccaggaatgccaggtttatctggtcaattcgccgaacctggagaaccaggt
cgtgatggattagacggtcaaccgggaatacctggacggccaggacaaaagggagcacct
ggagaatatggtcctaatggcccgaagggaattcatggagatgaaggggaaattattcca
ggtcccaagggaataagaggcgatgttggacatagaggatatgtcggatttccgggagaa
ccaggtcttccaggacaacctggtttcccaggacctgttggtccaaaaggttatagagga
gagccaggaacttcggaatttagtcacaaaggagagagaggagatgctggtctattggga
cttgatggtcttcatggtccaaaaggcatgcgaggtgatacgggatatgcaggaagacca
ggaattcccggtgctaaaggggaaagaggaatagatggacatcatggacttccaggaccg
ccaggacctccaggtccgcagggaatgaaaggacatcgtggattgcttccattccccgca
gtaccaagaccaggattaccaggagatgatggaccacctggattaccaggtttatcggga
agaaaaggagaatctggtgaaccaggagaggatggtttgccgggacgcattggagaaagg
ggaatggatggtccaattggtccacctggtcagccaggaagagatggaccaaatggattc
caaggtcctcctggaactgacggacgtcctggatcaccaggatatcctggagaagctgga
gaaccggcgccaaggcctcgaggtcctcaaaatcgaggatttttcttcgctaggcactcg
cagtctgaaatgattcctacctgtccaaagaacactgtcaaactatgggacggattctct
cttttgcacatcatgggcaatggtcatccatgggctcaggacttaggtcaagctggaagt
tgtcttcgaaagttttccactatgccgttctcggtttgtaatttgaacgacgtttgtgat
tatgcacagagaaacgattacagttattggttaagttcaacggaaccaatgccaatgatg
atgacaccaattcctgcgcccgaagttggtagatacatatcgcgatgttccgtttgcgaa
gctccgacaagattaattgccattcacagtcaaactatggacattccacaatgtcccggt
ggttgggaagaagcatgggttggctacagtttcttaatgcatagagattcgggagcagcg
ggtggtggacaatcattagtatcacctggatcatgtctcgaggaatttagaacgcgacca
ttcattgaatgtcgtggtcttggtacttgtaattactttggaacagcaatttcctattgg
cttgcaactgtgaaagattacgagcaatttagaaaacctctacagcaaacactaaaggct
gatcatacatcgcgtgtcagtcgttgcgctgtttgtcgtcgacgtcttgtcaatgaagat
tatagtcatacatatccattgaatacactcagagaaaatcgttatccacaaagtgtatat
cctgaaagtcgtgaagaatcagatcgcacatttatcagtaataataatattccgccacgt
attcaaaatcgaccatacgaatggcaacgaaatcaaagacccgcacagcaacgtcatcct
tataggcaacgtcatcatcaaaatccaagaagaaatcgtattcacacttctgaaacagat
ccacaatcaaattatacatga
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integrated database retrieval system
