Leptopilina boulardi: 127280077
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Entry
127280077 CDS
T08910
Name
(RefSeq) collagen alpha-1(I) chain
KO
K06237
collagen type IV alpha
Organism
lbd
Leptopilina boulardi
Pathway
lbd04382
Cornified envelope formation
lbd04512
ECM-receptor interaction
lbd04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lbd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127280077
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
127280077
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
127280077
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lbd04147
]
127280077
00536 Glycosaminoglycan binding proteins [BR:
lbd00536
]
127280077
Exosome [BR:
lbd04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
127280077
Glycosaminoglycan binding proteins [BR:
lbd00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
127280077
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
127280077
NCBI-ProteinID:
XP_051158802
LinkDB
All DBs
Position
Unknown
AA seq
1846 aa
AA seq
DB search
MRPKGRILIFKVLDFLWIIGGVFFILSTGWINGVESVICRDGEKCNCTGIKGEPGHFGIP
GGIGPQGLPGEVGPDGPAGPKGEKGAAGEHGSTGEKGYRGDTGARGFVGDAGRPGMIGNA
GLSGPDGLEGCNGTDGTMGGPGRSGHYGERGLPGAPGSYGPRGEPGEGGVNSKGSKGIRG
EFGTDGLKGFPGQIGYTGDIGLPGERGDPGYDGFPGEQGPIGEPGEPGIGIQGFQGDMGD
TGEPGQDFLPWTIINQTVLQGKRGPPGPKGDSGSYGRPGLPGVKGPQGRSGLHGFKGVKG
EQGDDGPRGKQGVTGPEGPAGEKGEKGAPGFEGRPGSDGFDGEAGEDGNAGPPGKQGAEG
EKGAYIPELDEMVPGSIGPQGDLGPHGEQGESGTPGLAGNVGYIGPAGPPGPPGMPGIPG
KKGTSEKGERGDDAPSGPRGPIGPPGYQGLPGIVGDKGFPGLAIVGPPGQEGKRGFDGYH
GLPGDRGDPGPPGEKGFPGKGVRIRGPPGESGLPGIPGSAGKPGIPGLPGFKGGRGFRGD
DCGVCTPGLPGLKGEQGESGRQGFAGTPGYPGFPGPRGQKGVHGNSGVVGPPGLEGTSGR
TGIAGVTGPKGEPGRIIWPPQNKTEILYAMGDKGDKGLPGPEGLMGPVGRPGLPGDEGMQ
GPNGAKGEHGMPGLPGRDGVPGKFGRDGEKGDSASVEIYLLRGDAGLPGLPGRKGERGIV
GVKGERGISASAIFENIKGLRGYKGENGEAGFDGYKGFKGRVGDVGFVGLPGPPGPPGFS
FQGPHGLKGYPGMPGEEGPRGTPGQPGLMGPEGYPGFLGQKGERGDPGSNLIYGDIGEMG
VYGEKGEYGEAGPRGYSGRAGYDGPKGMRGAKGAPGFTGLSGLQGSKGSRGDSIQGSRGM
PGIPGAPGFRGIPGDVGYKGSDGAPGFSGMKGLKGDTGYPGRRGEDGATGIIGFRGMNGA
PGLPGLPGMEGDVGLRGESGPPGRQGLDGADGEVGIKGERGDTGPEGLMGPDGPPGFKGV
IGDIGPDGPDGPRGENAFSGPQGDKGEPGFMGEVGSPGRPGIDGRPGLPGEPGMAKDGFD
GLKGEQGEPGFDGIDGLRGLKGEIGDMGLDGDKGERGDDGIKGWPGKPGLHGRYGEKGKR
GPMGPAGFEGLKGKRGLDGDPGLMGRPGMPGDIGPVGYPGVSGPRGRKGQIGEPGIAPYL
IGTKGDFGIPGMHGFPGRKGERGEAGYPGYAGLKGMEGDIGFRGADGFPGLEGLPGLPGD
QGMPGMPGLSGQFAEPGEPGRDGLDGQPGIPGRPGQKGAPGEYGPNGPKGIHGDEGEIIP
GPKGIRGDVGHRGYVGFPGEPGLPGQPGFPGPVGPKGYRGEPGTSEFSHKGERGDAGLLG
LDGLHGPKGMRGDTGYAGRPGIPGAKGERGIDGHHGLPGPPGPPGPQGMKGHRGLLPFPA
VPRPGLPGDDGPPGLPGLSGRKGESGEPGEDGLPGRIGERGMDGPIGPPGQPGRDGPNGF
QGPPGTDGRPGSPGYPGEAGEPAPRPRGPQNRGFFFARHSQSEMIPTCPKNTVKLWDGFS
LLHIMGNGHPWAQDLGQAGSCLRKFSTMPFSVCNLNDVCDYAQRNDYSYWLSSTEPMPMM
MTPIPAPEVGRYISRCSVCEAPTRLIAIHSQTMDIPQCPGGWEEAWVGYSFLMHRDSGAA
GGGQSLVSPGSCLEEFRTRPFIECRGLGTCNYFGTAISYWLATVKDYEQFRKPLQQTLKA
DHTSRVSRCAVCRRRLVNEDYSHTYPLNTLRENRYPQSVYPESREESDRTFISNNNIPPR
IQNRPYEWQRNQRPAQQRHPYRQRHHQNPRRNRIHTSETDPQSNYT
NT seq
5541 nt
NT seq
+upstream
nt +downstream
nt
atgcggccaaagggtcgcatcttaatattcaaagttctggattttttatggatcattgga
ggtgtgtttttcattctatcaacgggatggattaatggtgttgagagtgtgatatgcaga
gacggtgaaaaatgtaattgtacgggaataaaaggtgagcctggacattttggaattcca
ggaggaattggacctcaaggattgccgggagaagttggtccagatgggccagcgggacca
aaaggcgaaaaaggagctgccggagaacatggaagcacaggagaaaaaggttaccgagga
gacactggagcgagaggatttgtcggagacgctggaagacctggaatgattggaaacgct
ggattaagtggtccagatggtttagaaggttgtaatggaactgatggaacaatgggagga
cccggaagatcaggacattatggagaacgaggtcttcctggtgctccaggaagttatgga
ccacgtggtgaacccggtgaaggtggtgtcaattcaaagggaagcaaaggaataagaggc
gaatttggaaccgatggtctaaaaggttttccaggacagattggctatacgggcgatatt
ggacttccaggagagagaggtgatccgggttatgatggatttcctggagaacagggacca
attggagaaccaggtgaaccgggtattggaatacagggatttcaaggtgacatgggagac
accggagagcctggacaagattttttaccatggacaataataaatcagacagtattgcaa
ggaaaacgaggacctccaggaccaaaaggtgatagtggcagttacggtcgtcctggttta
ccaggtgttaaaggaccgcagggtcgttcgggtctacatggttttaaaggagtaaaggga
gaacaaggagacgatggaccaagaggcaagcaaggtgttaccggtccagaaggtcctgcc
ggtgaaaaaggagaaaaaggagctccaggttttgaaggacgaccgggatccgatggtttt
gatggagaagcgggagaagatggtaatgctggaccacctggaaaacaaggagcagaaggt
gaaaaaggcgcgtacattccagaactcgatgaaatggttcccggaagtattggacctcaa
ggagatttaggaccgcacggtgaacaaggagaatcaggaactccaggattagcgggaaat
gtgggatatattggaccagcaggacctccgggacctccaggtatgcctggaattccggga
aaaaagggaacatctgagaaaggagaacgaggcgacgatgctccatctggaccaagggga
ccaataggtcctccaggttatcaaggactacccggaattgttggagataaaggatttcct
ggtttagcaattgttggaccacctggacaagagggaaaacgaggttttgatggttatcat
ggacttcctggagatcgtggcgatcctggtccaccgggcgagaaaggttttccgggtaaa
ggtgttagaattcgaggaccgcctggcgaaagtggtcttccaggaattccaggttctgca
ggaaaaccaggtattccaggacttccgggatttaaaggcggaagaggttttcgaggagac
gactgtggcgtttgtacaccaggattacctggactaaaaggtgagcagggtgaaagtgga
aggcaaggatttgctggaactccgggctatccaggatttccaggaccaagaggacaaaaa
ggtgttcatggaaattctggcgttgtgggtccaccaggtttggaaggtaccagcggaaga
actggaatcgctggtgttactggtcccaaaggtgaaccgggaagaattatttggccaccg
caaaataaaactgaaattttatacgcaatgggcgacaaaggtgataagggtcttcctgga
cctgaaggtctcatgggtcctgttggtcgtcctggtttacctggtgacgagggtatgcaa
ggacccaacggcgccaagggtgaacatggaatgcctggattaccgggtagagatggagta
ccaggaaaatttggccgtgacggtgaaaagggagattctgcttctgttgaaatttatcta
ttgcgaggtgatgcaggtttacctggtttaccaggtcgcaaaggtgaacgtggtatcgtt
ggcgttaaaggtgaacggggaatttcagcatcggcaattttcgaaaatatcaaagggctt
agaggctataagggagaaaatggagaagcaggatttgatggctacaaaggttttaaggga
cgagtgggcgacgtaggatttgtaggattaccaggacctcctggaccacctggtttctca
tttcaaggtccacatggtctaaagggctatcctggaatgccaggcgaagaaggaccacgt
ggtacacctggacaaccgggtctcatgggtcctgaaggatatccaggttttctgggacag
aagggagaacgtggtgatccaggctcaaatttaatatacggtgatattggagaaatgggt
gtttatggagaaaagggagaatacggtgaagctggtccacgtggatattcaggaagagct
ggttacgatggaccaaaaggaatgagaggtgctaaaggggcaccgggttttactggacta
agtggactacagggatcaaagggatcgagaggtgacagtattcaaggatcaagaggaatg
cccggaattccaggtgcacctggatttagaggaattccaggagacgttggttataaagga
tctgacggtgcgccaggatttagtggaatgaaaggattgaagggcgacacaggttatcct
ggacgtcgtggtgaggatggagcaacgggaataataggattcagaggaatgaatggtgca
ccaggtttacctggtcttcctggaatggaaggcgatgttggattgcgaggggaatctgga
ccaccaggaagacaaggtttagatggcgccgatggtgaagtgggaattaaaggagaacgt
ggtgacactggacccgaaggacttatgggacctgatggtccacctggttttaagggtgtt
attggtgatatcggacccgatggaccggatggaccgagaggagagaatgcgtttagtgga
cctcagggcgataagggtgagcctggattcatgggcgaagttggatcgccaggtcgtccg
ggaattgacggtcgacctggtcttccaggtgagccaggaatggcaaaggacggtttcgat
ggtttgaagggagaacaaggagagccgggttttgatggtatcgatggacttcgaggactt
aaaggggaaattggagatatgggtttggatggtgataaaggagaaagaggcgatgatgga
attaaaggttggccaggaaagcctggattacacggaagatatggagagaaaggtaaacgg
ggaccaatgggaccagcaggttttgaaggtttgaaaggtaaacgcggcttggatggagat
ccgggtctaatgggacgaccgggaatgcccggagatattggtcctgtaggatatccaggt
gtttcaggtcctcgcggtcgtaaaggtcaaattggtgaacctggaatagctccatatttg
ataggtacgaaaggcgattttggtattcctggaatgcatggattccccggaagaaaagga
gaaagaggagaagccggttatcctggatatgctggtctaaagggaatggaaggtgacata
ggattccgaggagctgatggatttccaggacttgaaggacttcctggtcttcctggagat
caaggaatgccaggaatgccaggtttatctggtcaattcgccgaacctggagaaccaggt
cgtgatggattagacggtcaaccgggaatacctggacggccaggacaaaagggagcacct
ggagaatatggtcctaatggcccgaagggaattcatggagatgaaggggaaattattcca
ggtcccaagggaataagaggcgatgttggacatagaggatatgtcggatttccgggagaa
ccaggtcttccaggacaacctggtttcccaggacctgttggtccaaaaggttatagagga
gagccaggaacttcggaatttagtcacaaaggagagagaggagatgctggtctattggga
cttgatggtcttcatggtccaaaaggcatgcgaggtgatacgggatatgcaggaagacca
ggaattcccggtgctaaaggggaaagaggaatagatggacatcatggacttccaggaccg
ccaggacctccaggtccgcagggaatgaaaggacatcgtggattgcttccattccccgca
gtaccaagaccaggattaccaggagatgatggaccacctggattaccaggtttatcggga
agaaaaggagaatctggtgaaccaggagaggatggtttgccgggacgcattggagaaagg
ggaatggatggtccaattggtccacctggtcagccaggaagagatggaccaaatggattc
caaggtcctcctggaactgacggacgtcctggatcaccaggatatcctggagaagctgga
gaaccggcgccaaggcctcgaggtcctcaaaatcgaggatttttcttcgctaggcactcg
cagtctgaaatgattcctacctgtccaaagaacactgtcaaactatgggacggattctct
cttttgcacatcatgggcaatggtcatccatgggctcaggacttaggtcaagctggaagt
tgtcttcgaaagttttccactatgccgttctcggtttgtaatttgaacgacgtttgtgat
tatgcacagagaaacgattacagttattggttaagttcaacggaaccaatgccaatgatg
atgacaccaattcctgcgcccgaagttggtagatacatatcgcgatgttccgtttgcgaa
gctccgacaagattaattgccattcacagtcaaactatggacattccacaatgtcccggt
ggttgggaagaagcatgggttggctacagtttcttaatgcatagagattcgggagcagcg
ggtggtggacaatcattagtatcacctggatcatgtctcgaggaatttagaacgcgacca
ttcattgaatgtcgtggtcttggtacttgtaattactttggaacagcaatttcctattgg
cttgcaactgtgaaagattacgagcaatttagaaaacctctacagcaaacactaaaggct
gatcatacatcgcgtgtcagtcgttgcgctgtttgtcgtcgacgtcttgtcaatgaagat
tatagtcatacatatccattgaatacactcagagaaaatcgttatccacaaagtgtatat
cctgaaagtcgtgaagaatcagatcgcacatttatcagtaataataatattccgccacgt
attcaaaatcgaccatacgaatggcaacgaaatcaaagacccgcacagcaacgtcatcct
tataggcaacgtcatcatcaaaatccaagaagaaatcgtattcacacttctgaaacagat
ccacaatcaaattatacatga
DBGET
integrated database retrieval system
