Leptopilina boulardi: 127280276
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Entry
127280276 CDS
T08910
Name
(RefSeq) exosome complex exonuclease RRP44
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
lbd
Leptopilina boulardi
Pathway
lbd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lbd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127280276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbd03019
]
127280276
Messenger RNA biogenesis [BR:
lbd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
127280276
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_CSD1
Rrp44_S1
CSD2
OB_HELZ2
Motif
Other DBs
NCBI-GeneID:
127280276
NCBI-ProteinID:
XP_051159141
LinkDB
All DBs
Position
Unknown
AA seq
984 aa
AA seq
DB search
MLTTKTFFRKTKGGGIFKVVREHYLRDDVWCGSEACKICKNQNNILDETNPGIKSSLFPE
FHYLLLDTNVVLDQINVFEEDLLCNVIILQTVLEEVRHRSSNVHTKLKEIISDPKRNFYV
FVNEHHKDTYVERNPGEKVNDRNDRAIRVATKWFNEHLKIQDIPIRVVLLTDDVQNREKA
ISDSIPVASMQDYISSLENPGFLLDKLSRKSYDVDGESREPLFPCHLPPSQLHDGIKSGK
FMQGTFLASRENFLEGSVNVEGMEQFILVQGRSSLNRAVDGDIVAIELLPEDKWSAPSDI
VLQDEEEEDPGDVLEDEKILMEQTPKKIIEKTPTGVIVGIIRRKWRQYCGILQVSSNKDN
TRHIFVPAEKKIPKVRIETRQYETLSKERIIVAIDSWPRHSRYPSGHFVRALGPIGDKDT
ENEVLLLEHDVPHSRFSDAVLSFLPKLPWIITENDVAQRTDLRHLDVCSVDPPGCTDIDD
ALHCRDLPNGNLEVGVHIADVSHFIRPGTAIDKEAALRATTVYLVDKRIDMVPELLSSNL
CSLRGGEERFAFSCIWEIDHDANIIKTDFCKSIIRSRSAMTYEEAQIKIDDQNQQDALAQ
SLRGLNNLAKKLKAQRLTNGALVLASPEIRFQVDSETHDPIDVEAKKIRETNSMVEEFML
LANISVATKILQEFPECAMLRRHPEPPQSNFDPLIKAGKHQGFVINTNTGKELALSLESA
HKNDNPYFNTMLKILATRCMMQAVYFTSGMLQPSEYFHYGLACPIYTHFTSPIRRYADVI
VHRLLAVCTGADATYPDLLDKKTNHKLCHNLNYRNRMAQYAGRASVALNTHLFFRGKIQD
EDGYILFVRKNALQILIPKFGLEGTLYLSKKGEENPVNFTYDEMEHTQTFGNIVFRSFDR
VTVQLSLDRSNVQREKLVFKLVKPEIPGFSVPASDKAKDASESKDLKSELTEDVVMSDDE
KMTSELPKRKGKISGKKQNKKRKK
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgttgacaacaaaaacttttttccgaaagacaaaaggagggggtatttttaaggttgta
agagaacattatctcagagatgatgtttggtgtggatcagaagcttgcaaaatatgcaaa
aatcaaaataatattcttgacgaaacgaatcctggaattaaaagttctttgtttcctgaa
tttcattatttattacttgatacaaatgttgttctcgatcagataaatgtttttgaagaa
gatttactatgtaatgtaataattttacaaacagttttggaagaagtacgacatagaagc
tctaatgttcatactaaattaaaagaaattatttctgatccaaagagaaatttttatgtc
tttgtcaatgaacatcacaaagacacttatgtagaaaggaatcctggagaaaaagttaat
gacagaaatgatcgtgctattagagtagcaacaaaatggtttaacgagcatttaaaaatt
caagatattccaattcgagttgttcttttaactgatgatgttcaaaatagagaaaaagca
atttcagattcaattcccgttgcttcaatgcaagattatatatcatcgttggaaaatcca
ggatttttattggataaattgagtcgaaaaagttatgatgttgatggtgaatctcgagaa
ccattatttccatgtcatcttcctccttcacaattgcacgatggaataaaaagtggtaaa
tttatgcagggaacatttttggcgtctagggaaaattttctcgaaggatcagtgaatgtt
gaaggcatggaacaatttatactagtgcaaggaagatctagtttaaatcgagcagtcgat
ggtgatattgttgccattgaattattacctgaggataaatggtcagcaccaagtgatatt
gttcttcaagacgaagaggaggaagatccaggcgatgttcttgaggatgagaaaatttta
atggaacaaactcctaaaaaaattatcgaaaaaacaccaactggtgttattgttggtatt
attagacgaaaatggagacaatattgtggaatattacaagtttcatcaaataaagataat
acaagacacatttttgtacctgccgagaaaaaaataccaaaagttcgcattgaaacgaga
caatatgaaactttgagcaaggaaagaattattgttgcaatagattcgtggcctcgtcat
tcgagatatccgagtggtcattttgtacgtgccttgggaccaattggtgacaaagatact
gaaaatgaagtattacttctcgagcatgacgttcctcatagccgattttctgacgctgtt
cttagtttcttgccaaagttgccgtggattatcaccgaaaatgacgttgctcaaaggaca
gatttgagacatttggatgtttgttccgttgatccacctggatgtacagatattgacgat
gctcttcactgtcgagacttgccgaatggtaatctcgaagttggtgtacacatagcggac
gtctcgcattttattagacctggaactgcaattgataaagaagctgctttacgtgcaacg
acagtttatcttgtggacaaaagaatcgacatggttccagaattattaagttcaaattta
tgctcattacgaggaggtgaagaacgatttgcattctcttgtatctgggaaatagatcac
gatgctaatattattaaaacagatttttgtaaatctatcatacgctctagaagtgctatg
acttatgaggaagcacaaataaaaattgatgatcaaaatcaacaagacgctcttgcacaa
tctttaagaggtcttaataatcttgcaaaaaaattaaaagcccaacgtttaacaaatgga
gcattagttttggcttcaccggaaattcgttttcaagttgatagtgaaacgcatgatcca
attgacgtggaggcgaaaaaaatacgagaaacaaattccatggtcgaagaattcatgtta
ctggcaaatatatcagttgccacgaaaatccttcaagaatttccggagtgcgctatgttg
cgacgacatccggaaccacctcaatcgaattttgatcctttgattaaagcaggaaaacat
caaggttttgtaattaatacgaacacaggaaaagaattggctctatctttagaatcggcg
cataaaaatgataatccttactttaatacaatgttgaaaatattagcaactagatgcatg
atgcaggctgtttattttacaagtggaatgcttcaaccttcggaatattttcattatgga
ttggcctgtccaatttacactcatttcacatcaccaattcgaagatatgctgacgtaatt
gtccaccgattattggcagtttgtacaggtgccgacgcaacgtatccggatttattggat
aaaaaaactaatcataaactatgccataatttaaattatcgaaatagaatggctcaatac
gctggaagggcgtctgttgcacttaacactcatctattctttaggggcaaaattcaagat
gaagatggatacattctttttgtacgaaagaatgctttgcaaattttaattcctaaattt
ggattagaaggaacgctttatttaagtaagaaaggcgaagaaaatcctgttaattttaca
tacgacgaaatggagcatactcaaacatttggaaatattgtttttcgctcgtttgatcgt
gtgacagttcaattgagtctcgacagatctaatgtacaacgtgaaaaacttgtttttaaa
ctcgttaaaccagagattccaggcttcagtgttccggcatctgataaagcaaaggacgcg
agtgaatcaaaagatttgaaatctgagttaactgaagatgtagttatgtcagatgatgag
aaaatgacatcggaattaccgaaaagaaaaggaaagatttctggtaaaaagcaaaataaa
aagaggaaaaagtag
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