Leptopilina boulardi: 127283401
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Entry
127283401 CDS
T08910
Name
(RefSeq) U3 small nucleolar RNA-associated protein 4 homolog
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
lbd
Leptopilina boulardi
Pathway
lbd03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lbd00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
127283401
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lbd03009
]
127283401
Ribosome biogenesis [BR:
lbd03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
127283401
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_EML
WD40_Prp19
ANAPC4_WD40
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_Vps41
Mcl1_mid
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_IP5PC_F
Beta-prop_DCAF4
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
127283401
NCBI-ProteinID:
XP_051164198
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MSTCRIHNVRFYNLEPKAVTCLCYGQDVKKLALTRDDNTIEIWHVENAPFILSTIPGHCD
YSIEAILWVGSRLFSTGLRGMIVEYDLIKLGSKYEIAVTGGAAWCMDVNRDKTRMAIGTE
DGYINTFFITSDSLLYERIFDKQKGRILCLKWDNSGDMIFTGSSDTVRVWNSITGHAIHK
MTTSRKEAKKETIVWCLEVTDENTIVSGDSRGVICIWDPNVGTLIESYESHTADILALSM
SNDMNMFYCAGVDPVIRIFSKVISKGRTQWVRGTERRLHVHDVRALIEANGKLYSAGVDG
YLAQSSYPPKFLVKYPPLLQTPCVSVCKKSRCILLRYSNFLELWRLGESKNSQDLVPIGT
LHQLKEEPVKLLTLKTKDEENIVTCAVNKTSKIIVYSTDSHLRIFNFDVVDGNASLCRND
TDVPLNKVQKILFSPDSKRIVTIDNNGNVNTVTFYEIEKKSRLRYFGAFQTDSEFIHRVG
LVCFSPDRRYLICSDESRIVVYHVDGDLTRESLKPWSLPKYSCPVTAMSVQEDTLNLVVV
YADHKIIEYNIPSRKYTEFSKNLQNCLPLQWLSRPFPITNIIFNPKNENVIIMHDDTSVF
VLNKKNELPNNKVKIAKLENGDSRDDSNSGLSTQSHHMFQIIKKYKHLVHLDWLNDEEMV
AVEVNPISLTEKLPPTLKKKSFGI
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtctacttgtagaattcacaacgttagattttataatctagaaccaaaagcagtaaca
tgtttgtgttatggtcaggatgttaagaagttagcactcacgagagatgacaacactata
gagatatggcacgtggaaaatgcgccttttattttatcaacaattccaggacattgtgac
tattcaatagaagcaattctctgggttggttcacgtctattttcgactggtctccgtgga
atgattgtagaatatgatttaataaaattaggctcaaaatatgaaatagctgtaactgga
ggtgctgcatggtgtatggacgttaatcgtgataaaacacgaatggcaattggtacagaa
gatggttatataaatacatttttcataacatcggattctttactttatgaaagaattttc
gataagcagaaaggaagaattctctgtttaaaatgggataattcaggtgatatgatattt
actggatcttccgatacagtgagagtttggaattcaataactggacatgcaattcataaa
atgacgacatcgagaaaagaagcgaaaaaggaaactattgtctggtgtttagaagtgact
gatgaaaatacaattgtctcaggtgattctcgtggtgttatttgtatatgggatcctaat
gttggtacattaattgaatcatacgaaagtcatacggccgatattcttgctcttagtatg
tcaaacgatatgaatatgttttattgtgcgggtgttgatcctgttattagaattttttca
aaagtcatttctaaaggtagaacacaatgggtacgaggtactgagagacgattacatgta
cacgatgttcgagcattaattgaagctaatggaaaattatattcagctggtgttgatggt
tatttggcacaatcgagttatccgcctaaatttcttgttaaatatccaccattattgcaa
acgccttgcgtgagtgtgtgtaaaaaatcacgatgcattctcttaagatatagtaatttt
ctagaattatggcgattgggtgagagtaaaaattcacaagatttagtgccaattggtact
ttacatcaattgaaagaggagcctgttaaattactcacgttaaaaacaaaagatgaggaa
aatattgtcacttgtgctgtgaataaaacatcgaaaattattgtctactcaactgatagt
catttgagaatttttaattttgacgttgtcgatggaaatgccagtttgtgtagaaatgat
acggatgttccattaaataaggtacaaaaaattctcttcagtccggattcaaaacgaatt
gtaactattgataacaatggtaatgtaaatactgtaacattttatgagattgaaaagaaa
agtcgattaagatattttggtgcatttcaaactgatagtgaatttattcatcgtgttgga
ttagtttgcttctcaccagatagaagatatctcatttgctctgatgagagtcgaatcgtc
gtttatcacgtggatggagatctcacgagggaatcacttaaaccctggtcattacctaaa
tacagttgtcctgttactgctatgtctgttcaagaagatactctcaatttagttgtcgtc
tatgccgatcacaagattattgaatacaacattccatctcgaaagtatacggaattttcc
aagaatttacaaaattgtctaccattacaatggctttcgagaccctttccaatcaccaat
ataatttttaatcctaaaaatgaaaatgttataattatgcatgacgatacttcagttttt
gttctcaataaaaagaatgaattgcctaataataaggtgaaaattgcaaaattagaaaat
ggtgattcacgagatgactcaaattctggtcttagtacacagtctcatcatatgtttcaa
atcattaaaaaatataagcatttggtccatttggattggttgaatgatgaagaaatggtt
gctgtagaggttaatccgatatcattgactgaaaaattgccaccaactttaaagaaaaag
agttttggcatttaa
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