Leptopilina boulardi: 127284120
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Entry
127284120 CDS
T08910
Name
(RefSeq) fibril-forming collagen alpha chain-like
KO
K06236
collagen type I alpha
Organism
lbd
Leptopilina boulardi
Pathway
lbd04512
ECM-receptor interaction
lbd04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lbd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127284120
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
127284120
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lbd00536
]
127284120
Glycosaminoglycan binding proteins [BR:
lbd00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
127284120
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
127284120
NCBI-ProteinID:
XP_051165375
LinkDB
All DBs
Position
Unknown
AA seq
1528 aa
AA seq
DB search
MGKRVTILLVAGFLVVQNLAQLESAKAKRHRPKPTQQPNVHSDLYSEYEDYYEEYDESNE
TSTIESQTERSQYAEPGSYGRSRFSESTPLPVTSRPVYSSTSFDHSNTENENLICEYDGI
FRRPGEEWKPNNCTLCICNRGKSDCTQLIPCTINDSESSENIDSRTEEPENDQSSEIVPG
ESNRVSSVYSGLHDDSMSTARPSRSDIPVPSPDVSMYYQQLAIAQASDDKGPSGPDPFAY
IHAQTGPSGPRGPPGPQGIPGPQGFPGPRGEPGDTGPPGVPGSLGSRGLPGFPGKDGESG
EDGDTGAQGPPGNPGPRGSTGLPGLPGMKGHRGFPGVDGAKGDQGPFGEKGPLGPSGPMG
PIGPMGSPGPRGERGREGLPGSPGLRGIDGISGPPGQSGPVGKSGAPGFPGQPGVKGDQG
TQGTKGSQGSPGPRGETGRTGLVGEAGPQGPPGKDGQQGEKGNAGNAGAVGLPGFPGSRG
LPGMSGNPGTPGEKGINGEPGEKGFKGETGVKGDSGIPGPRGLPGVVGSEGKKGKRGMRG
PPGSAGPPGERGTSGPRGLPGSEGPIGPKGLTGEKGGIGPAGPKGSPGEIGRQGLPGLQG
VRGGTGRAGPAGKQGLPGERGVSGPEGKVGEQGPIGPQGIPGPLGPPGEKGYHGDSGKDG
EPGLPGQPGIKGDTGKPGPSGVQGLTGLTGNTGDKGPPGPIGARGFQGLPGAPGNSGTPG
KDGEVGPRGQAGSPGSTGNRGERGVPGERGPVGAAGPTGAKGEIGAPGVDGLNGLPGPKG
ERGISGVSGLLGLPGLKGPSGDAGPKGDKGVIGPLGPEGPQGRMGDRGPQGLSGPAGPPG
EPAERGDPGAPGPMGENGPPGGPGERGLQGPQGNQGFPGPPGLIGLPGAKGDSGHSGLKG
ERGSPGVTGAPGEMGPQGRHGPQGVKGSRGEPGARGETGPLGPPGNPGLVGSIGPQGQIG
PPGNPGIQGVKGAPGEAGRQGNPGSIGSPGSPGSDGAKGESGNEGPSGSPGAVGPPGVQG
DRGLPGLPGLSGPTGGRGSRGVPGEVGPIGKQGPEGLPGPSGITGPVGPPGPVGEAGIEG
PPGKPGLPGFTGKQGEKGPPGLSGPSGIPGAPGLQGAPGSIGNPGSPGEKGPKGDTGFPG
LEGIPGLRGKPGLAGPDGVKGERGVEGAKGLKGHRGLIGLQGLPGIQGLPGDKGSAGPPG
LPGKDGEHGIRGNPGRDGSPGLLGPIGNPGPRGPSGEGRQGPAGPPGPPGPPGPPGDGSL
GYDAASLAAYFNMGQQQGSSKGPDSPLGDEPARYFGNEMTIDEKKEFMSKMQNRLEEYVK
KLTKPNGEKNSPAKTCSDLFATYPNKKSGEYWIDPNGGDTQDSILVHCDAERRATCLFSN
PSRTAEINHIGEEQEVWLSEVKPSIKVTYKADGNQISFLQMLSKHAEQNITYHCKNSIAY
FDSERKNYRRGLRLLAWNDVELAPRGNRRLKYDVITDECQSRAKNWAKTIITYKTEKPLR
LPILDVAMRDIGKEDQSFWIEIGLACFQ
NT seq
4587 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaagggtgaccattcttttggtcgcaggtttcctcgtggtccaaaatttggcc
caattggaatctgccaaagccaaaagacatcgacccaaaccaactcaacagccaaatgtt
cattcagatttatactcggaatatgaagattattacgaggagtacgacgaaagtaatgaa
acatctacaattgaatcacaaacggaacgatcgcaatatgcagaaccaggaagttatggg
cgatcgagattttcggaatcaacgccacttccggtaacatcgagacctgtttattcatca
acatcatttgaccattcaaatacagaaaatgaaaacttaatctgcgaatatgatggaata
tttcgaagacctggagaggaatggaaaccaaataattgcacactttgcatatgcaatcga
ggaaaatctgattgtactcaactaattccatgcacaattaacgattcagagtcttcagaa
aatatagattcaagaacagaagagccagaaaatgaccaatcatcggaaatcgttcctggt
gaaagtaatcgagtcagttctgtatattctggattgcacgatgattctatgtcgactgca
cgaccgtcacgttcggatattcctgttccttctcctgatgtttctatgtattatcaacaa
ttagcaatagctcaagcaagtgacgataaaggaccttcaggaccagatccttttgcttac
atacatgcacaaactggaccttctggtccgcgtggtcctccaggaccgcaagggattcct
gggcctcaaggatttcctggtccaagaggagaaccaggagatactggacctccaggagtt
cctggatcgcttggaagtagaggcttaccgggatttcccggaaaagatggagaatctgga
gaggacggggatacgggagctcaaggacctccaggaaatccaggtccaagaggttccaca
ggtctgccaggacttcctggaatgaaaggacatcgaggatttcccggtgttgacggagct
aaaggggatcaaggtcctttcggtgaaaagggtccactaggtccatcgggtccaatggga
ccaattggaccaatgggatctcctggtcctcgtggcgagaggggaagagaaggacttcct
ggatcacctggacttagaggaatcgatggaataagcggacctccaggacaatctggtcct
gttggaaaatctggagcacctggatttcctggtcaaccgggagtaaaaggtgatcaagga
actcaaggaacaaagggaagtcaaggttctcctggtccaagaggagaaacgggacgtact
ggtcttgtgggcgaggcgggtccgcaaggaccaccaggaaaagacggtcaacaaggagag
aaaggaaatgctggtaatgcaggcgcagttggacttcctggttttcctggatcaagagga
ttaccaggtatgtctggaaatcctggaacacctggcgagaaagggattaatggagaacca
ggagaaaaaggattcaaaggtgaaacgggcgtgaaaggtgattcaggaattccaggacct
cgtggtttaccgggtgtcgttggttcagagggcaaaaagggcaaaagaggaatgcgaggt
ccaccaggttctgctggtccacctggagaacgaggaacatctggaccaagaggacttccc
ggcagtgaaggtcccattggtcccaaaggtctaactggagagaagggaggaattggtccc
gctggacctaaaggaagtcctggagaaattggacgtcaaggtcttccaggattgcaggga
gtgcgaggtggaacaggaagagctggtcctgctggaaaacaaggacttcctggagaacgt
ggagtttctggaccagagggaaaagtcggagaacaaggaccaattggtccacaaggaata
cctggtccacttggaccaccgggagaaaaaggatatcatggcgattcaggaaaagatgga
gaacctggacttcctggacaaccgggtataaaaggtgacacgggtaaaccgggtccttca
ggagttcaaggcttaacaggattaacaggaaatacaggtgataaaggacctccaggtcca
attggtgctcgaggatttcagggcttaccaggagcgccgggaaattcgggaacgccagga
aaagatggtgaagtaggaccgcgaggacaagcgggatcaccaggaagtactggtaataga
ggagaacgaggagttcctggagaaagaggtcctgttggagctgcaggacccactggtgct
aagggagaaattggagccccaggggttgacggtcttaatggtttaccgggtcctaaaggt
gaaagaggaatttccggagtttctggtttgcttggcttgccaggattaaagggaccttca
ggagacgctggaccaaaaggtgacaagggtgtaattggtcctcttggccctgaaggtcca
caaggacgtatgggtgatcgtggtccacaaggattgtcaggaccagctggaccacccggt
gaaccagcagagaggggagatcctggtgcaccgggtcctatgggcgaaaatggacctcct
ggaggtcctggcgagagaggtttacaaggccctcaaggtaatcaaggatttccaggacct
ccaggtttaattggacttcccggtgctaagggagattctggacattcgggattgaagggt
gaaaggggaagtcccggtgtaaccggcgctcctggtgaaatgggtcctcaagggagacac
ggacctcaaggtgtaaaaggatctcgtggtgaacctggtgcaagaggagaaactggacct
cttggtccacctggaaatcccggattggttggatcaattggacctcaaggtcaaattgga
ccaccaggaaatcctggaattcaaggtgtgaagggagctccaggcgaggcaggtcgtcag
ggaaatcctggatcaattggtagtccaggatcaccaggatctgatggtgcaaaaggagaa
agtggcaatgaaggcccatcaggatcacctggagcagttggccctccaggagtgcaaggc
gatagagggttaccaggattaccaggcctctctggacccacaggaggcagaggatcccgc
ggagttccgggagaagttggtccaattggaaaacaaggtcctgagggacttcctggtcct
tcaggaataacaggtcccgttggtccgcctggtcctgtgggcgaagcgggaatagaagga
ccacccggaaagccaggattgcccggatttactggaaaacaaggagaaaaaggacctcct
ggtttaagtggaccttcaggaattcctggtgctcctggattacaaggtgcaccgggtagt
atcggaaatcctggatctcctggagaaaagggaccgaaaggtgacactggatttccgggt
ttagaaggaattccgggtctcagaggaaaaccaggacttgctggtcccgatggtgtaaaa
ggagaaagaggagtggaaggagcaaaaggattgaaaggacatcgaggtctcattggtttg
caaggattgcctggaatacagggactacctggtgataaaggatctgcaggaccaccgggt
ttgccaggaaaagatggcgagcatggtattagaggaaatccgggtcgagatggaagtcca
ggtcttttgggaccaattggaaatccaggaccaagaggaccttctggagaaggacgtcaa
ggacctgcaggtcctccgggcccacctggaccaccaggacctcctggagatggaagttta
ggatacgatgcggcttcacttgccgcctattttaatatgggtcaacaacagggttcaagt
aaagggccagattcacctcttggcgatgagccagcgagatattttggcaatgaaatgacg
attgatgagaaaaaagaatttatgtcaaaaatgcaaaatcgtttagaggaatatgtgaaa
aaattgacaaagcccaatggtgagaaaaattcaccggccaaaacgtgtagtgatcttttt
gctacatatcctaataaaaaatcaggtgagtattggattgatccgaatggaggagataca
caagattcaattttggttcattgtgatgctgagagacgtgcaacttgtttattctcaaat
ccaagtcgaactgcagaaattaatcacattggagaagaacaagaagtttggctcagtgaa
gtaaaacccagtattaaggtgacatataaagccgacggcaatcaaataagtttcttgcaa
atgttatcgaaacatgccgagcaaaatatcacttatcattgtaaaaatagcattgcatat
tttgattctgaacggaaaaactatagacgaggattaagacttttggcctggaatgacgtc
gaattggcaccaagaggaaatagacgactcaaatatgatgtcatcacggacgaatgtcag
tctcgagcaaaaaattgggccaagacaataattacatataaaacggaaaagccgctcaga
cttccgattttggatgtggcaatgagagacattggaaaggaagatcaaagcttttggata
gaaataggactcgcttgctttcaataa
DBGET
integrated database retrieval system
