Leptopilina boulardi: 127284704
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Entry
127284704 CDS
T08910
Name
(RefSeq) collagen alpha-1(XXII) chain isoform X1
Organism
lbd
Leptopilina boulardi
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
Laminin_G_3
DUF1554
Motif
Other DBs
NCBI-GeneID:
127284704
NCBI-ProteinID:
XP_051166268
LinkDB
All DBs
Position
Unknown
AA seq
1181 aa
AA seq
DB search
MLSSFSALLLLIFTVLNVTYAQADIFGEKKELVHDLLQAAVSVIDDRFQYFEEGLDGFPA
FGFRPGSEVKQPYRIYLPEKLPAEFTLVATFKPKSTRPSYLFAVLNPFDTVVQLGIRISD
GPASNQNVSLVYTNSDEHSHSEDIVKFTLPKLTKKWSQIVIKVTTTDITLYLNCHEMSSQ
KVIRIPQELVFDTASTLYIAQAGPHIQGKYDGLLQTLKLYAGHPQDLVKCNADFDFPSGS
GSGDIEPIEGSGEIDLDNVFIATDDDDEPSEEFNPPPLITPPPPNVDARGIKGEKGDKGD
KGESVRGPPGPPGPPGDGFDLNDEEFHENMPRGPPGPKGEQGECSCNATSLLTSFTMPKM
IQGPKGESGVVGKEGKQGQMGLTGVAGPPGERGQQGAFGQKGDRGEIGAMGPEGPQGQKG
EPGRDGIPGEKGALGPPGPPGKGEFSGYDPSWKPRSGYRGEGTPMRPGLPGQKGDPGMTG
NTGPKGEMGIVGSKGAKGEVGHKGSKGEHGKEGHKGNQGFKGEPGAPGVPGLPGAPGENG
RPAEKGAKGDAGPEGKLGPAGPPGPPGTGGINVGDTAAGVKGEKGELGSFGYKGEIGLKG
EKGDKGDFGPAGIPGVNGVQGPQGEKGEPGRDGIPGSSGIPGSKGDRGERGPPGPTTIAG
SGDYITIKGEKGSEGKKGRRGKPGNPGSPGPPGPTGPPGKPGSIGDIGLPGYMGRQGNPG
IPGSQGSVGPKGDKGEPGAPSPYGVPLGLKGEKGDDGFPGIPGQPGRDGQRGPPGSTGPP
GPAGPMGPAPQGNYIPVPGPPGPPGPPGTPGLSFVGQKGEPGIGKSHFFAERDYYGARQD
TRFKSSLDELKALRELKQLKELKEHLGTGTVSTRGPLESTTKIVPGAVTFQNTEAMTKMS
GVSPVGTLAYIIDEEALLVRVNSGWQYIALGSLLPITTPAPPTTVPPPANPPFEASNLIN
QIPIKADGTGWYPRMLRMAALNEPFTGDMHGVRGADYTCYRQAKRAGLRGTFRAFLSSRV
QNVDSIVRLGDRDLPIVNIKGDVLFNSWKEMFNGNGAYFSQNPRIYSFNGKNILTDFAWP
DKVAWHGSHTLGDRAMDTYCDAWHSSSSDRFGLGSPLTDGRLLEQIRYSCDNKFALLCIE
VTSELARRRKRSDDLFELLDNEDNELTELEYQEHLEQVMNN
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgttgtctagtttcagtgcattgttgctgttgatcttcacggtcctgaatgtgacatac
gctcaagcggacatattcggcgagaagaaggaattggtacatgatttactacaagcggct
gtctcagttattgacgacagatttcaatatttcgaagaaggcttggatggttttccagcc
ttcggatttcgtccaggttccgaagtcaagcaaccatatagaatttaccttcctgagaaa
cttccggccgaattcaccttggttgcgacttttaagcccaagtctactaggccaagctat
ctttttgcagttctcaatcctttcgataccgtcgttcagcttggtattcgtatttcggat
ggaccagcatccaatcaaaatgtttctctcgtctacacaaattcagatgagcattcacat
tccgaagatattgttaaatttacattgccaaaattaacgaagaaatggtcacaaattgtg
attaaagtaacgacaacggacatcacactttatctaaattgtcatgagatgtcaagtcaa
aaagtcatcaggataccgcaggaattggttttcgacactgcaagcacactttatatcgct
caagctggaccacatatccaggggaaatacgatggtcttctacaaacgttgaaattgtac
gcaggacatcctcaggatcttgtcaaatgtaatgccgattttgattttccttcgggctct
ggctcgggtgatatcgaaccaattgaaggttcaggagagattgatttagacaacgtcttc
attgcaactgacgatgacgatgaaccaagtgaggaatttaatccaccgccgctaattaca
ccaccaccaccaaatgtcgatgctcgtggtataaaaggtgaaaagggtgacaaaggagac
aagggtgagagtgtgagaggacctccgggaccaccaggtcctccaggagacggcttcgac
cttaatgacgaggaattccatgagaacatgccaagaggaccaccaggaccaaagggagaa
caaggtgaatgcagctgtaacgcgacatcgttgctcacatctttcacgatgccgaaaatg
attcaaggtcctaagggagagtctggagtcgttggaaaagaaggaaaacagggacaaatg
ggactcacgggtgtagctggaccaccgggagaaagaggacagcaaggtgcttttggtcag
aaaggtgatagaggcgaaattggcgcaatgggaccagaaggacctcagggtcaaaagggt
gagcccggaagggatggaattccaggggaaaaaggcgctcttggaccgccgggtcctcct
ggcaaaggggaattttctggttacgatcctagttggaaacctcgcagtggatacaggggt
gaaggtacaccgatgagaccaggattaccaggacaaaaaggcgatccaggaatgacgggc
aatactggaccaaaaggtgaaatgggaattgtaggaagtaaaggagcaaaaggtgaagtt
ggccataagggatcgaagggagaacatggtaaggagggacataaaggaaatcaaggattt
aaaggcgaacctggcgctccgggtgttcctggacttcccggtgctcctggtgaaaatgga
agaccggctgaaaaaggcgcgaaaggtgacgcgggtccagagggaaaattaggccctgct
ggaccacctggacctcctggtactggtggaattaatgttggcgataccgctgcgggtgtc
aaaggggagaaaggagagctaggcagttttggttacaaaggtgaaattggattgaagggt
gagaaaggtgataaaggagattttggaccagctggaattcctggtgtgaatggagttcaa
ggaccgcaaggtgaaaagggtgaaccgggtagggatggaattccgggttcctctgggatt
ccgggatcaaaaggtgatcggggcgagagaggtccaccaggtcctacaacaatcgctggc
tccggcgattatattacaatcaaaggagaaaaaggatctgaaggtaaaaaaggaagacga
ggaaagcccggaaatccaggaagtccaggtccacctggtccaactgggccaccaggtaaa
cctggaagtattggagacatcggtctgcctggatatatgggccggcagggaaatccaggt
attcccggaagtcaaggatctgtgggaccaaaaggtgataaaggagaacctggtgcacca
agtccttatggagttcctcttggtttaaaaggcgaaaagggagatgatggatttcctgga
attcctggtcaacctggtcgagatggacagaggggacctccgggatctacaggaccacct
ggtcccgcaggacctatgggaccagctccccaaggaaattatattccagttccaggacca
ccgggaccaccgggtcctcctggtactcctggactatcgtttgtcggtcaaaaaggagaa
ccaggaataggcaaaagccatttctttgctgaaagagactattatggtgccagacaagat
acaagatttaaaagtagtttggatgagttgaaagcattaagggaattgaaacaactcaaa
gaattgaaagaacatttaggaacaggtacggtctcgacgagaggtcctctagaaagcaca
acgaaaatagtaccaggagctgtgacattccaaaataccgaagccatgacaaaaatgtcc
ggcgttagtcctgtaggaacattagcttacattattgatgaagaggctttattagttagg
gtgaatagtggttggcaatatattgctcttggttctcttttgcctatcacaactccagca
ccaccaactaccgttccaccacctgcaaatccaccatttgaagcgtcaaatcttatcaat
caaattccaataaaagctgacggaacaggatggtatccacgaatgctgcgaatggcagct
ttaaatgagccttttactggagatatgcacggggttcgtggagctgattatacttgttat
cgacaagcaaaacgagcaggcttaagaggcactttccgtgcttttcttagctcgagagtt
cagaatgttgacagtatagttagactaggtgatagagatctacccattgtaaatatcaag
ggagacgttcttttcaattcatggaaggaaatgtttaacggaaatggagcatatttctcc
caaaatccacgaatttatagcttcaatggaaaaaatattcttaccgacttcgcttggcca
gacaaagtggcttggcacggttctcatacactcggtgatcgtgcaatggacacctattgc
gatgcctggcattcgagtagctctgatcgctttggtcttggatctccattaactgacgga
cgattactggaacaaattcgttactcgtgtgacaataaatttgcattgctctgcatagaa
gtcaccagtgaacttgcgcggagacgaaaacgctcggacgatctcttcgaattattggac
aatgaagacaatgaactcacggaattggaatatcaagaacatttagagcaagttatgaac
aattga
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