Leptopilina boulardi: 127285244
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Entry
127285244 CDS
T08910
Name
(RefSeq) pre-mRNA-splicing factor syf1 homolog
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
lbd
Leptopilina boulardi
Pathway
lbd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lbd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127285244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbd03019
]
127285244
03041 Spliceosome [BR:
lbd03041
]
127285244
Messenger RNA biogenesis [BR:
lbd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
127285244
Spliceosome [BR:
lbd03041
]
Complex B
Other components
Prp19-related factors
127285244
Complex C
127285244
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_2
TPR_12
TPR_8
TPR_10
TPR_15
NRDE-2
DHR-2_Lobe_A
TPR_7
PPR
HTH_psq
Motif
Other DBs
NCBI-GeneID:
127285244
NCBI-ProteinID:
XP_051167101
LinkDB
All DBs
Position
Unknown
AA seq
859 aa
AA seq
DB search
MADSSENSLALLQNEEDLPYEEEILRNPFSVKHWQRYIDHLKATKSPNLNIVYERALKEL
PGSYKLWNNYLRLRLKKLKDQVKGNIQHPLYEDVGNAFERALVWMHKMPRIWINYCIFMT
EQGFITQTRHVFDKALRALPITQHHRIWPLYLNFVKMHNIPETAVRVFRRYLKMAPEDTE
DYIEYLISIDRLDESATQLAHIVNQDDFVSKHGKSKHQLWSELCDLISKHPTQIKTLNVD
AIIRGGLRRYTDSLGSLWNSLADYYIRSGLFERARDIYEEAIQTVKTVRDFTQVFDAYAQ
FEELSYKKVLEENVNNLNLTEEDEIEEELRLARYENLLERRLLLLNSVMLRQNPHNVQEW
HKRVTLYEGEPHEIINTYTEAVSTVQPELAVGKLHTLWVEFAKFYENNSQIPDARVVFEK
ATLVQYLKVDDLASVWCEWAEMEIRHNNIAEALRLMQRATAMPSRKVAYHDENESVQMRL
YKSLKVWSMYADLEESFGTFKMCKAVYDKIIDLKIATPQIIINYGVFLEENNYFEEAFRA
YEKGIALFKWPNVYDIWNTYLQKFKKRYEGTKLERMRDLFEQCLEHCPPKYAKNLYLLYA
KLEEDYGLARHAMSVYERATDAVLPEEKFEMFNVYIQKAANIYGVPQTRTIYEKAIEVLN
EENSREMCLRFAEMETKLGEVDRSRAIYAFCSQMCDPRTTSNFWQVWKEFEVRHGNEDTM
REMLRIKRSVQAKYNTNVNMMAAQIQNSATNQITEPMDAMRLLDSKVSEMPPPPGPKNTI
KFIRGATEGGKTTEPQVTNPDEIDIDMDMDNDDDDDNDNDEGDENGPETEDIPVEKQIIP
SEVFGSLRKKDDDDDDDNS
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggctgattctagtgaaaattccttagcacttttacaaaatgaagaggatttaccatat
gaggaggaaatattacgaaatcctttttcggtgaaacattggcagagatatattgatcat
ttaaaagcaacaaagagtccaaatttgaatattgtttacgaacgagccctcaaagaacta
ccaggaagttataaattgtggaataattatcttcgactaagactaaaaaaattgaaggat
caagttaaaggaaatatacaacatccactttacgaggatgttggcaatgcttttgaacga
gcattggtgtggatgcataaaatgccacgaatatggataaattattgtatttttatgact
gaacagggttttataacacaaactcgtcatgtttttgataaagcactaagggcattgccc
attacccaacatcatagaatttggccactttatttaaattttgtgaaaatgcataatatt
cccgagactgctgtaagagtttttcgaagatatctaaagatggcaccagaagatacggag
gattatatcgaatatttaatatcaatagatcgattggacgaatcagcaactcaacttgct
catattgttaatcaagatgattttgtttcaaagcatggaaaatcaaaacatcaattatgg
tccgaattgtgcgatttaatatcaaaacatccaacgcaaataaaaacactaaatgttgat
gcaataattagaggtggtcttcgacgttatacagattcattgggttcattatggaattcc
cttgctgattattatattcgtagtggactttttgaaagggcgagagatatttacgaggag
gctatacaaacagtaaaaacagtgagagatttcactcaagttttcgatgcatacgcacaa
tttgaagaattaagttacaaaaaagttttagaagaaaatgtcaataatttgaatctaact
gaagaagacgaaatagaagaagaattaagacttgctcgttatgaaaatctacttgagaga
cgattattgttacttaattcggtaatgttgagacaaaatcctcacaatgtacaagaatgg
cataaacgtgttacactttacgagggagaaccgcacgagattatcaatacatatacagag
gcagtgagtacagttcaaccagaattggctgttggaaaattacacacattatgggtggaa
tttgcaaagttttatgagaataattctcaaataccggacgcgagagttgtatttgaaaaa
gcaactctcgtacaatatttaaaagtcgacgatctcgcttccgtttggtgtgaatgggca
gaaatggaaattagacacaacaatatagcagaagccttgaggctcatgcaacgcgctact
gcaatgccatcacgaaaagttgcctatcacgacgaaaatgaatcggttcaaatgagatta
tataaatcattaaaagtttggtccatgtatgcggatcttgaagagagctttggaacattt
aaaatgtgtaaagcggtttatgacaaaataatcgatttaaaaatagcaacccctcaaatt
attataaactacggtgtctttttggaggaaaacaattatttcgaagaagctttcagagct
tacgaaaaaggaattgctctctttaaatggccgaatgtttacgatatatggaacacatat
cttcaaaagtttaaaaaacgttacgagggcacaaaattggaacgtatgcgagatttattt
gaacaatgtctcgaacattgtccacctaaatatgccaaaaatttgtatttactttatgca
aaattggaggaagattatggtctcgcaagacacgcaatgtcagtttatgaacgtgcaaca
gatgctgttcttcctgaggaaaaattcgagatgttcaacgtttatattcagaaagcggca
aatatttatggtgttcctcaaacaagaacaatttacgagaaagctattgaagttctaaat
gaagaaaattcaagagaaatgtgtttacgttttgctgaaatggaaacaaaattaggcgaa
gtcgatcgttcgagagcaatttatgcattttgttcacaaatgtgcgatcctcggacaaca
tcgaacttttggcaagtctggaaggaatttgaggttcgtcatggaaatgaggacacaatg
cgtgaaatgttgagaataaaacgtagcgttcaagctaaatacaatacaaatgtgaatatg
atggctgcacaaatacaaaatagtgccacgaatcaaatcactgaaccaatggatgcaatg
cgtttattagacagcaaagtatcggaaatgcctccaccaccgggacctaagaatacaatt
aaatttatacgcggcgcaacagaaggtggaaaaacaacagaaccacaagttacgaatcct
gatgaaattgatattgacatggatatggacaatgatgatgatgatgacaatgataatgac
gagggagatgaaaatggtcccgaaacggaagatattccagtagaaaaacaaattatacca
tctgaagtgtttggcagtctacgaaaaaaagatgatgatgacgatgacgataattcataa
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