Leptopilina boulardi: 127287194
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Entry
127287194 CDS
T08910
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
lbd
Leptopilina boulardi
Pathway
lbd03013
Nucleocytoplasmic transport
lbd03015
mRNA surveillance pathway
lbd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lbd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127287194
09122 Translation
03013 Nucleocytoplasmic transport
127287194
03015 mRNA surveillance pathway
127287194
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbd03019
]
127287194
03041 Spliceosome [BR:
lbd03041
]
127287194
Enzymes [BR:
lbd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127287194
Messenger RNA biogenesis [BR:
lbd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
127287194
Spliceosome [BR:
lbd03041
]
Complex C
Other components
EJC/TREX
127287194
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
127287194
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
127287194
NCBI-ProteinID:
XP_051169960
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MADNDDLLDYEDEEQTEQVVDGSGDAPAKKEVKGTYVSIHSSGFRDFLLKPEILRAIVDC
GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLELTENQVYVLVMCHTR
ELAFQISKEYERFSKYMPAVKVAVFFGGLPIQKDEEVLKSSCPHIVVGTPGRILALVRSK
KLNLKHLKHFILDECDKMLELLDMRRDVQEIFRSTPHGKQVMMFSATLSKEIRPVCKKFM
QDPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCMAL
ATLLTDQNFPAIGIHRGMTQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYD
MPEDSDTYLHRVARAGRFGTKGLAITFVSDESDAKILNDVQERFDVNITELPDEIDLASY
IEGR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggccgataacgacgatcttttggattacgaggatgaggaacaaaccgagcaggttgtc
gatggaagtggtgatgctcctgcaaagaaggaagttaaaggtacctacgtgtcaatccat
agcagtggattcagagacttccttcttaagccggaaatcctgcgagccatcgtcgattgc
ggttttgaacatccttctgaagttcagcatgaatgcattccacaggcagttcttggcatg
gatattctttgccaagccaaatccggtatgggaaaaactgccgtgtttgttctcgcgaca
cttcaacaactcgaactcacagaaaatcaagtctatgtacttgtaatgtgtcacacacga
gaacttgcattccaaattagcaaagaatacgagaggttcagtaaatacatgccggcagtg
aaggtggctgtattctttggaggtttgcctattcagaaggatgaagaggttttaaaaagt
tcatgtcctcatatcgtagttggaacaccaggtcgtattttggcgctagtccggagcaag
aaactcaatttgaagcatttgaaacattttattctggacgaatgtgacaaaatgctcgaa
ctgttagatatgagaagagacgtacaagaaatattccgaagtacaccacatggcaaacaa
gtgatgatgttcagcgccactttatcaaaggagatacgaccagtctgcaagaaattcatg
caagatcccatggaagtctacgtggatgatgaagcgaaactcacgttacatggtttgcag
cagcattacgtgaaattgaaagaaaatgaaaagaacaaaaaattgtttgaacttcttgat
gttcttgaattcaatcaggttgtgatctttgttaaatctgtacaaaggtgtatggcattg
gcaacattattgactgatcaaaatttcccagctattggaattcatcgtggaatgacacaa
gaagaaagattgtcacgttatcaacaatttaaagattttcagaagagaattttagtagca
actaatttattcggaagaggaatggatattgaacgagtgaatattgttttcaattatgat
atgccagaggattcggatacatatttacatagagtagcgagagccggacgttttggcaca
aagggattggcgattactttcgtgagtgacgagagtgatgctaaaatattgaacgacgtt
caagaacgatttgacgtcaatattacggaattaccagatgaaattgatctcgcctcttat
attgagggacgatag
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