Leptopilina boulardi: 127287479 Help Entry 127287479         CDS       T08910                                  Name (RefSeq) helicase SKI2W   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism lbd  Leptopilina boulardi Pathway lbd03018   RNA degradation Brite KEGG Orthology (KO) [BR:lbd00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     127287479  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:lbd03019]     127287479 Enzymes [BR:lbd01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      127287479 Messenger RNA biogenesis [BR:lbd03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      127287479   mRNA degradation factors    3'-5' decay     Ski complex      127287479 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DSHCT Ski2_N DEAD Helicase_C DEXQc_Suv3 ResIII MTR4_beta-barrel MTR4-like_stalk ATPase_2 Motif Other DBs NCBI-GeneID:  127287479 NCBI-ProteinID:  XP_051170387 LinkDB All DBs Position Unknown AA seq 1252 aa AA seqDB search MTSEETKSLFCFVEELFLPFGPPPILADIKSELKEFIEYPDNLPIYNIDNAQCYWPRKPD ILALLNADLAPVGTCIKFKRDPITGKIGDMLEVNVQGTGETARNSMSMTRAPGPPAEGVR GNTSNFLFWPGGFDEAKIPEESELTNVHFETNLRTLAKGFKCGMDFEPDNFTPKNVQSGD VSQMRIHESFEKENNLDLMLIVDEEANSLDFLAKPILQSKPDVKCEEKLETDIENMLLSI DTITESVSESKIPVLKITEEGKSFLHAEWAEQLDVTVTVTDFEKRVPNPAINFKYELDNF QKQAIIKLEEDCNVFVAAHTSAGKTTVAEYAIALSQRHMTRTIYTSPIKALSNQKFREFK EKFDSVGLITGDLQINQTASCLIMTTEILQSMLYCASEVLRDLEYVIFDEVHYINNEDRG HVWEEIVILLPRTVNIVMLSATVPNPLKFANWVGQIKKRKMYVISTVKRPVPLQHYLYIG SNMKTKDSCYLILDTDGQFSMEDWRQANAQRQRELKLSLDKKGTKKFKESKKQNKISIEP DVTSQDSEQTEEIKPSMISSKERATWIAFLKYLQQEDKLPVVVFALSRSRCDKTADSLQH QNVSLITNNEKDNVTDFFKKSIKRLKGSDAQLPQVRRMQILLEHGIGIHHSGILPILKEI VELLFQQGLVKMLFATETFAMGVNMPARTVVFDAVRKYDGSKFRALHPTEYIQMAGRAGR RGHDTTGTVMLLCKGEVPNFIDLQAMMCGEPQSLESQFKITYSMVLHLRRLSETVSVRDM MRRSFKEASTLVREKQVKADLQEIEETLAKTPALSANQEMLAEFYEIAIDYLRIWKKLRP EMLAAKKASKNLSEGRILLVSYKNHYNKLALLLDKRKQNDNIMYKVLILKDNEEMCDEDK PENWYRIIALTKKQLYSVNQMPSHEVLLIDESSILEITNCTIKTDYRCVIADWEKRQIPR FKDCSPGPTFSAVVQELLELSQSAVSNPEVLLPHTEMIINKIDLKPEEKKLNNLKRIINS SSVTQVNNFEQQFGDAFYRKELEEKKKELMIKLSDEQLRDYPDYINRVNILKELGYIDQN ERVTLKGRVALEMGMYELFLTELVFKNILTDWSPAEIAALLSSLVFQQRTEESDKNLSTR LKDLQKIVSDEYEILKAKEVKYNLTPAPPLNFGLVKVVYQWARAESFASIMNLTDVQEGI IVRCIQQLNETLRDVKNAAIIIGNPILKEKMDEASSAIKRDIVFTASLYTQD NT seq 3759 nt NT seq  +upstreamnt  +downstreamnt atgacatcagaagaaacaaaaagtttgttttgttttgttgaagagttatttttgccattt gggccacctcctatattagccgatattaaaagtgaattgaaagaatttattgaatatcct gataatcttccgatttataatatcgataatgcacaatgctattggccaagaaaaccagat attttggctttattaaatgccgatttggcaccagttggaacatgtattaagttcaagaga gatccaattactggaaaaattggagatatgttagaagttaatgttcaaggaactggtgaa actgctagaaattccatgtccatgacaagagcacctggacctccagcggaaggtgttaga ggcaacacaagcaatttcttattttggcctggtggtttcgatgaagccaaaattcctgaa gagtctgaattaaccaatgttcactttgaaactaatcttcgaaccttagctaaaggtttt aaatgtggcatggattttgagcctgacaattttactccaaagaatgttcaatctggagat gtttctcaaatgcgcattcatgaatcttttgaaaaagagaacaatttagatttaatgtta atcgttgatgaagaagctaattccctggattttttggctaaacccatattacaaagtaaa ccagatgttaaatgtgaagaaaaacttgaaactgacattgaaaatatgttactttcgata gacacaattactgaatcagtctcagaatctaaaattcctgtattaaaaattactgaagag ggaaaaagtttcttacatgcagaatgggctgagcaattagatgtgacagtaaccgttaca gattttgaaaaaagagttccaaacccagctattaattttaaatatgaattagataacttt caaaaacaagctattatcaaattggaagaggactgtaatgtttttgttgctgctcataca tctgctggtaagacgactgtcgcggaatatgcaattgcattaagtcaaaggcatatgact aggactatttacacttcacctataaaagcattatcgaatcaaaagtttcgcgaattcaaa gaaaaatttgatagtgttggacttatcactggagatttacagataaatcaaacagcttca tgtcttataatgactacagaaattttacagtcaatgttatattgcgcctctgaagttctc agagacttggaatacgttatttttgatgaagtgcattatataaataacgaggatagaggg catgtttgggaggaaattgtgattctactacctcggactgtaaatattgttatgttgtct gcaaccgtacctaatcctctaaaattcgccaactgggttggtcagataaagaaaaggaag atgtacgtgatcagtacagtgaaaagaccagtgccattgcaacattatttatatatagga agcaatatgaaaacgaaagacagttgttacctaattcttgacaccgatggtcaattttct atggaagattggcgacaggcgaacgcgcaacgacagcgtgaacttaaactgagtttagac aagaaaggtacgaaaaaattcaaagaaagcaagaaacagaataagatttcaattgagcca gatgtgacatcgcaggacagtgaacaaactgaagaaataaaaccttcaatgatttcgtca aaggaacgagcaacgtggattgcttttcttaaatacctacaacaagaggataaattgcca gttgttgttttcgcactttcccgaagtcgatgtgacaaaacagcagattctttgcaacat caaaacgtgtcattgatcacgaataatgaaaaggataatgtaactgatttctttaagaaa tcaattaaaaggctaaaaggttcagatgcacagttgcctcaagttcgaagaatgcaaata cttttagaacatggaattggtattcatcacagtggaattttacctattttgaaagaaatt gttgagttattatttcaacaagggttagtaaagatgctctttgccactgaaacgttcgcc atgggcgttaacatgccagcaagaacagttgttttcgatgctgttagaaaatatgatggt tctaaatttcgtgcacttcatcctactgagtatattcaaatggctggaagagctggacga aggggtcacgataccacgggaaccgttatgttgttgtgcaaaggagaggttccaaatttc attgacttgcaagcaatgatgtgcggcgaaccgcagagtttggagtcccagttcaagata acatactcgatggttttacatttgagaagactcagcgaaacggtctcagtgagagatatg atgcgtagatctttcaaagaagcaagtacactggtaagagaaaagcaggtgaaagccgac ttgcaagagattgaagaaaccttggcaaaaacaccggccctatctgcgaatcaggaaatg ttggcagagttttatgaaattgctatagattatttgcgaatttggaagaaacttcgaccc gagatgcttgctgcgaaaaaggcatcgaagaacctttcggaaggtcgtattttgcttgtg tcgtataaaaatcactacaacaaacttgccctcttgcttgacaaaagaaaacagaatgac aatattatgtacaaagtattgatacttaaagataatgaggaaatgtgtgatgaagataaa cctgagaactggtatagaataatagctctcacaaagaaacagttatactctgtgaatcaa atgccttcgcacgaagttctcctgatagacgagtcaagtattttggaaatcactaattgc actattaaaactgactatcgctgtgtgatagcagattgggaaaaacgacaaattccaaga ttcaaagactgttctcctggtccaacgtttagtgcagttgttcaagaattattggaatta tctcaaagtgctgtatcaaatccagaagtcttattgccgcacacagaaatgataataaat aagatagatctaaagccagaagaaaagaagcttaataatttgaaacgtattattaattct agttccgttactcaagttaacaattttgaacaacaattcggtgatgctttttatagaaag gaacttgaggagaagaaaaaggaattaatgattaaattaagtgacgagcaattaagagac tatccagattatataaatcgagttaatattttaaaggaacttggctatatcgatcaaaat gaaagagtcacattgaaaggaagagtagcactcgaaatgggaatgtatgaattattttta accgaactggtgtttaaaaatatccttactgattggagtccagctgaaattgcagcttta ctttcatctttagttttccaacaacgcacagaagaatctgacaagaatctcagtacaagg ctaaaagatttgcaaaaaatagtgtcagatgagtacgaaatcttaaaagcgaaggaagtg aagtataacttaacaccggctccacctcttaattttggcctcgtaaaagttgtataccaa tgggctcgagcagaatcatttgccagtattatgaatttaactgacgtccaagagggtatt atcgtcagatgcattcaacaactgaatgagactcttcgcgacgtaaagaacgctgctatc attataggaaatccaattttgaaagaaaaaatggacgaagcgtcgagtgccattaaacga gacattgttttcacagcttcactttatacccaagattga

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