Leptopilina boulardi: 127288087
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Entry
127288087 CDS
T08910
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
lbd
Leptopilina boulardi
Pathway
lbd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lbd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127288087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lbd03041
]
127288087
Enzymes [BR:
lbd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
127288087
Spliceosome [BR:
lbd03041
]
Complex C
Other components
Step II factors
127288087
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
AAA_16
AAA_30
PhoH
Motif
Other DBs
NCBI-GeneID:
127288087
NCBI-ProteinID:
XP_051171286
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MEIDEVAKLEHLSLVSKICTELENHLGVNDKDLAEFIIHLSEKNGTFENFKRVLIENGAE
FSDSFVQNLLRIIKHMKPIPTQASPPATSKKDELSTKFPALALPNERQDKKLANDDDIIN
EAMASLEAFAPSSLKTNSNESNEIKHERKRSHSRDLHRNRSRSPHQRHKRHKGRSRSRHR
SRSNSRSRRRSNSRSRRRSRSRDHKRENTSRDRRRYRSRERKRSRSGTRKSRVDDRKDSR
RTRKESERSRSRSTEELSIDPEIGKIYPGKVANIVPFGCFVQLESLKRRWEGLVHISQLR
REGRVASASDVVSRGQKVLVKVLSISGQKVSLSMKDVDQETGRDLNPVINVTRTEEDEKH
LRNPDRPTSLLELQANDDEDETYSRKRVQRLSSPEKWEIKQMLAANCIDRSELPEFDMET
GLLPRDDDEDEDIEIELVEEEPPFLQGHGRSLGDLSPVRIVKNPDGSLAQAAMMQSALAK
ERREQKMLQREQEIDSAPTGSHKNWIDPLPDVESRSMAANARGIGLQTQDLPEWKKHVIG
GKKSSFGKKTNLTLLEQRQSLPIYKLRDDLVKAVTDNQILIVIGETGSGKTTQITQYLAE
AGFTSRGKIGCTQPRRIAAVSVAKRVAEEFGCRMGQEVGYTIRFEDCTGPETKIKYMTDG
MLLRECLMDLDLKTYSVIMLDEAHERTIHTDVLFGLLKQAVGRRPELKLIVTSATLDAVK
FSQYFFEAPIFTIPGRTFDVEIMYTKEAETDYLDASLITVMQIHLREPPGDILLFLTGQE
EIDTACEILYERMKSLGKDVPELIILPVYSALPSEMQTRIFEPAPPGSRKVVIATNIAET
SLTVDGIYYVVDPGFVKQKVYNSKTGMDSLNVTPISQAAAKQRAGRAGRTGPGKCYRLYT
ERAYRDEMLPTPVPEIQRTNLATTVLQLKTMGINDLLHFDFMDAPPVESLIMALESLHSL
SALDNEGLLTRLGRRMAEFPLEPNLSKMLIMSVHLQCSEEILTIVSMLSVQNVFYRPKDK
QALADQKKAKFNQAEGDHLTLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLG
IMDRHKLDVVSASKNTVRVQKAICSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNR
QPEWVIYHELVQTTKEYMREVTTIDPKWLVEYAPAFFKFSDPAKLSKFKKNQRLEPLYNK
YEEPNAWRISRVRRRRN
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atggaaatagacgaagtagcaaaattagagcatttgtctcttgtatcaaaaatatgtaca
gaattagaaaatcatttaggagtaaacgataaagatttagctgaatttataattcattta
tcagaaaaaaatggtaccttcgaaaactttaaaagagtattaattgaaaatggagcggaa
ttttctgattcttttgttcaaaatctcttgagaattataaaacacatgaaaccaatacct
acacaagcatcaccaccagcaacgtcaaaaaaagatgaattatcaacaaaatttcccgca
ttagctctaccaaatgaaagacaagataaaaaattagctaatgacgatgatattattaat
gaagcaatggcctcgttagaagcctttgcaccatccagcttgaagactaatagtaatgaa
tcaaatgaaattaaacacgaaagaaaaagaagtcattcacgtgaccttcatagaaataga
tcaagatcacctcatcaaaggcataagagacataaaggtagatctcgttctcgacatcgt
tcaagatcaaattcacgttctcgacgtcgttcaaattcccgttcacgcaggcgctccaga
tcacgggatcataaacgtgaaaatacatctcgagacagaagaagatacagatcacgagaa
cgtaaacgatcacggtctggtaccagaaaatcaagagtcgacgatcgtaaagattcaaga
cgtacgcgaaaggaaagcgaaagatcaagatcacgttccactgaggaattgtcaattgat
cctgaaattggtaaaatttatcctggtaaagtggcgaatattgtgccatttggttgtttc
gttcaacttgaatcattaaaacgtcgatgggagggtcttgttcatatttcacaattacga
agagaaggtcgcgttgcaagtgcaagtgatgttgtttcacgtggacaaaaagttctcgtt
aaagttctcagtataagcggtcaaaaagtttcattgagtatgaaggatgtcgatcaagaa
acaggacgtgatctcaatccagttataaatgtaacaagaaccgaggaggatgagaaacat
ttgaggaatcctgatcgtccaacgtcattattggaacttcaagcaaatgacgatgaggac
gagacatattctaggaaacgagtacaaagactatcatcgcctgagaaatgggaaattaaa
caaatgcttgcagcgaattgtatagataggagtgaactaccagaatttgacatggaaacg
ggacttttaccacgtgacgatgatgaagatgaggacatagaaatagaattagtagaagag
gaacctccctttttacaaggacatggcagaagtttgggagacttgagtccagtgagaatt
gtcaaaaatcctgatgggtcattagctcaagctgcgatgatgcaaagtgcattagcaaaa
gaaagaagggaacaaaaaatgctgcaaagagaacaagaaatagattcagcaccaacggga
agtcataaaaattggattgatcccttgccagatgttgaaagtcgttcgatggcagcgaat
gctcgaggcattggtcttcaaacgcaagatttacctgaatggaagaagcacgtaattggc
ggtaaaaaatcatcatttggaaagaaaacgaatttaacacttttagagcaacgtcaatca
ttgccaatttataaattacgagacgatttagttaaggccgttaccgataatcaaattctc
atagttattggagaaactggttcgggaaaaacaacgcaaataacacaatatttagcagaa
gctggtttcacatctcggggaaaaattggctgcacacaaccaaggcgtatagcagctgtt
tcagtagcaaaaagagtggctgaagaatttggttgtcgtatgggtcaggaagttggttat
acaattcgatttgaagattgcactggtccagaaacgaaaataaaatacatgacagacggt
atgttattacgagaatgtctcatggaccttgatttaaaaacatattccgttattatgttg
gatgaggctcatgagagaacaattcataccgatgttttatttggacttttaaaacaagct
gtaggccgaagaccagaattaaaacttattgttaccagcgctactttggatgctgtgaaa
ttttctcaatatttctttgaggcgccaatttttaccattccaggcagaacttttgatgtt
gagattatgtacacaaaggaggctgagactgattatttagacgcatcattaataacagtt
atgcaaatacatttacgtgagccaccaggcgatattcttctatttttaactggtcaagag
gagattgatactgcttgtgaaattctttatgagcgaatgaaatcattgggcaaagatgta
cctgaattaattattttacccgtttattcagcattaccatcagaaatgcagacaagaatt
tttgagcctgcaccacctggttcacgtaaagttgttattgcgacaaatattgccgagaca
agtttaactgtcgatggaatttattatgttgttgatcctggatttgtgaagcaaaaagtc
tataattctaaaactggaatggacagtcttaatgtaacaccaattagtcaagcggcagca
aaacaacgtgcaggcagagccggaagaactggccctggaaaatgttatcgtttatataca
gaaagagcttatagagatgaaatgttaccgacaccagtgccggaaattcaacgtacaaat
cttgctacaactgttttacaattaaaaacaatgggtattaatgatttgcttcattttgat
tttatggatgcaccgccagttgaatcgcttataatggcattggaatcattgcacagttta
agtgcacttgataatgagggacttttaacgagattgggtaggcgaatggctgaatttccc
ttggaaccaaatttatcaaaaatgttaatcatgagcgttcatttacaatgttctgaagaa
attttaacaattgtcagtatgttgtctgtacaaaatgttttttacaggccaaaagataag
caagcgttagctgatcagaaaaaagcaaaatttaatcaggctgaaggagatcacttaact
ctattagcggtttataattcatggagaaacaataaatttagtaatgcgtggtgttatgaa
aatttcgtacaaatacgaacacttaaacgtgcacaagatgtgcgtaaacaacttttagga
attatggataggcataaattagacgtcgtctcagcaagtaaaaatacggttcgagttcaa
aaggctatttgttctggattctttagaaatgctgcgaaaaaagatccacaagagggatat
agaactttagtcgatagccaagtcgtttacattcatcctagcagtgctctgttcaacaga
caaccagaatgggtaatttatcatgaattagttcaaacgacaaaagaatatatgcgtgag
gtcacaacaattgatccaaaatggctagtggaatatgcgccggcattttttaaatttagc
gatccagcgaaattaagtaaatttaagaagaaccagagacttgaaccattatataataaa
tacgaagaaccgaatgcctggagaatatcaagagtacgacgtcgacgtaattaa
DBGET
integrated database retrieval system
