Leptopilina boulardi: 127289583
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Entry
127289583 CDS
T08910
Name
(RefSeq) ATP-dependent RNA helicase p62-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
lbd
Leptopilina boulardi
Pathway
lbd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lbd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127289583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lbd03041
]
127289583
03009 Ribosome biogenesis [BR:
lbd03009
]
127289583
Enzymes [BR:
lbd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127289583
Spliceosome [BR:
lbd03041
]
Complex A
U1 snRNP components
U1 related factors
127289583
Complex B
127289583
Ribosome biogenesis [BR:
lbd03009
]
Eukaryotic type
Pre-60S particles
Helicases
127289583
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
127289583
NCBI-ProteinID:
XP_051173542
LinkDB
All DBs
Position
Unknown
AA seq
562 aa
AA seq
DB search
MIRTFSGVLGVLRRTYGGYRNGASTNNRMGGGGGGSGGQRNGYHGSGGGSRFGGRGGGGG
GNSYGGNTRNVNNPKLSGGSLRKPNWDYENLKPFKKDFYIPHDNVQSRHVREIEQFRDEN
KITLKGTRVPNPIKYFEEGNFPDYVMQEIRKQGFNEPTPVQAQGWPIAMSGQNMVGIAQT
GSGKTLGYILPAIVHINSQQPLNRGDGPIALVLAPTRELAQQIQSVANDFGSLSYVRNTC
IFGGAPKGPQARDLERGVEICIATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEP
QIRKIIEQIRPDRQVLMWSATWPKEVRNLAEEYLTDYIQLNIGSLTLAANHNILQIVDVC
QEHEKETKLGTLLQEIGNANDDGGKTIIFVETKKKVENITRNIRRYGWPAVCMHGDKSQQ
ERDYVLKEFRNKRGGILVATDVAARGLDVDDVKYVINFDYPQSSEDYIHRIGRTGRSQST
GTSYAFFTPQNCKQAKDLISVLKEANQIINPKLNELASRGGGGGSSYGNKNRWGYGGGRG
RENTFSGSHKRFDSSRNYNNYS
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgatacgcacgtttagtggtgtacttggagttttacgccggacttacggaggataccgt
aatggtgcatcaacaaacaatcgcatgggaggcggtggcggaggaagtggaggacaaagg
aatggatatcatggtagtggaggtggttcacgatttggtggacgcggaggaggtggcggt
ggcaacagctacggtggaaatacacgaaatgttaataatccaaaactttctggaggcagt
ttgagaaaaccaaattgggattatgaaaatttgaaacctttcaaaaaagacttttacatt
ccccatgacaatgttcaatcgcgtcatgttcgtgaaattgaacaatttagagatgaaaat
aaaataacattaaaaggaacaagagttccaaatccaataaaatattttgaggaaggtaat
tttcccgattatgtaatgcaagaaattagaaaacaaggtttcaatgaaccaacaccagta
caagcacagggctggcccattgctatgtctggacaaaatatggttggaattgcccaaact
ggctctggaaagacccttggctacattttacctgcgattgttcatattaacagtcaacaa
ccattaaatcgtggtgatggtcctattgcattggtgcttgcaccaacacgtgaacttgca
caacaaattcaatcagtggcaaatgattttggctcattgtcatatgttagaaacacatgt
atttttggcggtgcgccaaaaggaccacaggctcgtgatcttgagcgtggtgttgaaatt
tgtatcgccacaccgggacgtttgattgactttttagaacgtggcacgaccaatttacga
agatgcacgtatcttgttcttgacgaagctgatcgcatgttggacatgggatttgagcca
caaattagaaaaatcattgaacaaatcagacccgataggcaggttcttatgtggtctgct
acatggccaaaggaagtacgcaatctcgctgaagaatatcttactgattatattcaactt
aacatcggttcacttactttggctgctaatcataatatccttcaaattgttgatgtttgc
caggaacacgagaaggagacaaaattaggaactttacttcaagaaattggcaatgccaat
gatgacggaggaaaaactattatttttgtcgaaactaagaaaaaagttgagaacatcaca
agaaacattcgtcgttatggatggcctgctgtttgcatgcatggcgataaatcacaacaa
gaacgtgattatgttctcaaagaatttagaaataaaagaggtggaattcttgtagcaaca
gatgttgctgcccgtggtctagacgttgatgacgttaaatacgtaataaacttcgattat
ccacaatcgtcagaagactatatccataggattggaaggacgggtcgtagtcaaagcacg
ggcacaagttatgcctttttcacaccacaaaattgtaaacaggcaaaggacctcataagt
gttcttaaagaagctaatcagatcatcaatccaaagctcaatgaactcgcatcgcgagga
ggcggtggtggtagttcttatggaaataaaaatcgatggggttatggaggaggaagagga
agggaaaacacattctctggatcgcacaagagattcgactcttctagaaactataacaat
tacagttga
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