Leptopilina boulardi: 127290537
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Entry
127290537 CDS
T08910
Name
(RefSeq) pre-mRNA-processing factor 6
KO
K12855
pre-mRNA-processing factor 6
Organism
lbd
Leptopilina boulardi
Pathway
lbd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lbd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127290537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lbd03041
]
127290537
Spliceosome [BR:
lbd03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
127290537
Complex C
U5 SnRNP specific factors
127290537
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP1_N
TPR_14
HAT_PRP39_N
TPR_19
HAT_Syf1_CNRKL1_N
Suf
TPR_16
HAT_PRP39_C
TPR_15
ARM_TT21_2nd
TPR_12
ARM_TT21_5th
Ribosomal_60s
ChAPs
Motif
Other DBs
NCBI-GeneID:
127290537
NCBI-ProteinID:
XP_051175133
LinkDB
All DBs
Position
Unknown
AA seq
932 aa
AA seq
DB search
MAVPSSASLSTRNKKHFLGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAPP
TKRAKKKEEEEEDEEDLNDSNYDEFSGYGGSLFSKDPYDKDDEEADAIYEAIDKRMDEKR
KEYREKRLREELERYRQERPKIQQQFSDLKRDLVSVTEDEWKNIPEVGDARNRKQRNPRA
EKFTPLPDSVLSRNLGGETTSSIDPTSGLASMMPGVTTPGMLTPTGDLDLRKIGQARNTL
MDVKLSQVSDSVAGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNPNHPP
AWIASARLEEVTGKVQAARNLIMKGCEVNPTSEDLWLEAARLQPADTAKAVIAQSVRHIP
TSVRIWIKAADLETETKAKRRVYRKALEHIPNSVRLWKAAVELEEPEDARILLSRAVECC
STSVDLWLALARLETYDNARKVLNKARENIPTDRQIWTTAAKLEEANGNKHMVEKIIERA
ISSLSANGVEINREHWFKEAMEAEKAGAVHCCQVIIKSVIGGGVEEEDRKHTWMEDAETC
AQQGALECARAVYAFALSTFPSKKSIWMRAAYFEKTYGTRESLEALLQRAVAHCPKSEVL
WLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENSEYERARRLLAKARA
SAPTPRVMMKSAKLEWALNNLDTALKLLKEALEMFDDFPKLWLMKGQIEEQQNMNEQALL
TYNQGMKKCPNSIPLWRLLTHLECRSGRVTKARSVLEKARLRNPKNDELWLEAVRIENQN
SATHNMAHTLMAKALQECPNSGLLWAEAIFMESRPQRKMKSVDALKKCEHDAHVLLAVSK
LFWSESKISKCRDWFNRTVKLRPDLGDAWAYFYKFEKLHGTDEQQEDVKKRCIASEPKYG
ENWCKVSKNINNWCFNTEQILILVAKDLPIPI
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggcagttccatcatcagcatcgttgtcaacaagaaataaaaaacatttccttggtgtt
cctgcacctttaggatatgttgctggcgttggcagaggagcaactggatttactactcgt
tcggatattggaccggcacgtgatgccaatgatgtttcagatgacagacatgcaccacca
actaaacgggctaaaaagaaagaagaggaagaggaagacgaggaggatttaaatgattct
aattatgacgaattttccggttatggtggttctttatttagcaaggatccatatgacaag
gacgatgaagaagcggatgcaatttatgaagcaattgataagcgaatggatgagaaacgt
aaggaatatcgagagaaacgtttaagggaagaattggaacgttatcgtcaggaacgacct
aaaatacaacaacaattttctgatttaaaacgtgatttagttagtgttacggaggatgaa
tggaaaaatattcctgaagttggtgatgcaagaaatcgtaaacaaagaaatccacgtgct
gagaaatttacaccgttgcctgattcggttctttcaagaaatttaggcggtgaaacaaca
tcgagtattgatccaacaagtggattggcgtcaatgatgcctggtgttacaacacctggt
atgttaacaccaactggtgatttagatttaagaaaaattggtcaagctagaaatacactt
atggatgtgaaattaagtcaagtttcggattctgttgccggacaaacggttgttgatccg
aagggttatctcactgatttacaaagtatgattccgacctatggtggtgatatcaatgat
ataaagaaggcgcgattacttttgaaatcggtacgtgaaacaaatccaaatcatccacca
gcttggattgcgtcagctcgtttggaggaagtaacgggtaaagttcaagcggcacgtaat
ttaataatgaaaggatgtgaagtaaatccaacgtcagaggatttatggcttgaggcagcg
agattacaaccggcggacactgctaaagcagttattgcacaatctgtacgtcatatacca
acttcggtgagaatttggataaaagccgctgatttagagacggagacaaaagcaaaacga
cgtgtttatcgtaaggcattggagcatattccaaattcggtgagattatggaaagcagct
gttgaattagaagagccagaggatgcgagaattttattgagtcgagctgttgaatgttgt
tcaacgagcgttgatttatggttagctttagcgcgattagaaacctatgataatgcgcgt
aaagttttaaataaagcgcgagaaaatattcccactgatcgacaaatttggacaacggca
gcaaaacttgaggaggcaaatggaaataagcatatggtggagaaaattattgagcgcgct
atttcatcgttaagtgcaaatggagtggaaattaatagagaacattggtttaaagaagcg
atggaagcagaaaaagctggtgccgttcattgttgtcaggtgattattaaatctgtgatt
ggaggcggtgtcgaggaagaggatcgaaaacatacctggatggaggatgcagaaacgtgt
gctcaacaaggagcgttagaatgtgcacgagctgtttatgcattcgctttgagcactttt
ccgagtaaaaagtccatttggatgagagctgcttattttgagaagacttatggaacaaga
gaatctcttgaagctttgttgcaacgagccgttgctcattgtccaaagagcgaagttctt
tggcttatgggagcaaaatcgaaatggttggctggcgatgttccggcagcaagagggatt
ttgtcattggctttccaggcgaatccaaattcagaggaaatttggttggcggctgtaaaa
ttagaatctgagaattcagaatatgaaagagcgagacgtcttttagcgaaggctcgtgca
tcagctccaacgccacgtgttatgatgaaaagtgcaaaacttgaatgggcgctcaataat
ttggatacggctttgaaattattgaaagaagcactcgaaatgtttgatgattttcctaaa
ttatggttgatgaagggacaaattgaagaacaacaaaatatgaatgaacaggctcttctt
acttacaatcaagggatgaagaaatgtccaaattcaattccattgtggaggcttttgacg
catttagaatgtcgctcgggtagagttacaaaggcgcgttcagttttggaaaaagcgcga
ttgcgaaatccaaagaatgatgaattatggcttgaggcagtgagaattgaaaatcaaaat
tcagcgacacataatatggcgcatacattaatggcaaaggcattgcaagaatgtccaaat
tcgggattattgtgggcggaagcaattttcatggaatcgaggccacaaagaaaaatgaag
agtgtcgatgctttaaaaaaatgtgaacacgatgcacatgttcttcttgctgtttccaaa
ttattttggagtgagagtaaaatttcaaagtgtcgagattggtttaatcgaacagtgaaa
ttgcgacccgatttaggagatgcttgggcatatttttataaatttgaaaaacttcatggt
actgatgagcaacaggaggatgtgaaaaaacgttgcattgcttcagaaccaaaatatgga
gagaattggtgtaaagtttcaaaaaatatcaacaattggtgtttcaatactgaacaaatt
ttaattcttgtcgcaaaggatctacccattccaatatga
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