KEGG   Nicoliella spurrieriana: MOO44_03050
Entry
MOO44_03050       CDS       T08428                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
lbe  Nicoliella spurrieriana
Pathway
lbe03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lbe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MOO44_03050 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lbe03019]
    MOO44_03050 (rny)
Messenger RNA biogenesis [BR:lbe03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     MOO44_03050 (rny)
SSDB
Motif
Pfam: HD RNase_Y_N HDOD RII_binding_1 NCKAP5
Other DBs
NCBI-ProteinID: UQS87155
UniProt: A0A976RSN2
LinkDB
Position
complement(307593..309185)
AA seq 530 aa
MYPLVALVMMIAGVGCGVITSNKQTAKKLANAKRRARQYLDERLAEIKSKKQQVISQNQA
RTADYERTITEDLATQITDNQTRETRIRQHADYLKQLSSRIDDDERRYNEIKDLNAKNRA
FVKQTIIQADQLVVHRHQILNEQSQLDDNTVKQMVLDETAQQLRRERDIEVKYLGESTET
YANRIADNVIIEAIQRGPEDVPRSHIERNVNIPSAEIRNRLLSHDEQHLRLIETLTGTGL
IFDPDDFLTLHIVTHDPIRREVVRRALNALIVSRQINNANIETQVNNARQDVNDELRETG
EDVVLSLHLGAMHPDLMKIIGRLKFRTSYGQNVLYHSIEVAQLAGVIASELGLNPRLARR
AGMLHDIGKAIDHEVEGTHVELGVKIAETYHEEPIVVNAIAAHHGDVEPISLIATLISTS
DAISGARPGARSESVEEYVSRLKNLEKIADTQPGVKESYAIQAGREIRIIVDPKRLNDHD
MSDMTKHVQAQIENDLTYPGKIKVTAIRKLNVIQYVGYNQKRRRYANATK
NT seq 1593 nt   +upstreamnt  +downstreamnt
ttgtatccattagtcgcattagtaatgatgattgccggagtgggctgtggagtcattact
agcaacaaacaaactgctaaaaaactggcgaatgcaaagcgtagggcaaggcaatatctt
gacgagcgtttggctgaaatcaaaagtaaaaagcagcaggtaattagccagaatcaagct
cggactgccgattatgaacggacaattaccgaggatttggcgacccagattaccgataat
caaacccgcgaaacgcggattcgtcaacatgccgattacttaaaacaattaagtagtcgt
atcgatgacgatgaacgccgttataatgaaattaaggatttgaatgccaaaaatcgggcg
tttgttaagcaaaccattattcaagctgatcaattggttgtgcaccgccatcagattcta
aatgagcaaagtcaattagacgataataccgttaagcaaatggtcttggacgaaacggca
cagcaacttcgaagggaacgtgacattgaggttaaataccttggtgagtccactgagacg
tatgccaatcgaattgctgataacgtcattattgaagccattcagcgcggacctgaagat
gttcctagaagccacattgaacgtaacgtcaacatcccatcagctgaaattcgcaatcgg
ctattaagtcacgatgagcagcacctgcggttaattgaaacgttgaccggaacgggcctg
atttttgacccggatgactttttaacgttacacattgtgacccacgatccaatccgacgg
gaagtggttcggagggcgttgaacgccttgattgtctcacgccaaattaataacgctaac
attgaaacccaggtcaataacgctaggcaagatgttaacgatgaactgcgtgaaactggt
gaagacgtggtgctttcactgcacttaggggcaatgcatcctgatttaatgaagatcatt
ggtcgtttgaagttccggactagttacgggcagaatgtcctttaccattcaattgaagtg
gcccaactcgccggagtgattgctagtgaactggggttaaacccccggctagcaagacgg
gccgggatgcttcatgatattggtaaggcgattgaccacgaagttgaggggacccacgtt
gaactaggggttaaaattgctgaaacctaccatgaggagccaatcgttgtcaacgcaatt
gctgcccatcatggtgatgtggaaccgattagcttgattgctacgctgatttcgacttct
gatgctatttctggtgcccgaccaggagccagaagtgaatcggttgaggaatacgtaagt
cgccttaagaatcttgaaaaaattgctgatacccagccgggtgtaaaagagagttacgca
attcaggctggccgtgagattcggattattgttgatcctaagcggttaaacgatcatgat
atgtcggatatgactaagcacgttcaagcacaaattgaaaacgacttaacttacccggga
aaaatcaaagtgactgcaattcgcaaattaaatgtaattcaatacgttggctataatcaa
aagcggcgacgctatgccaatgccactaaataa

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