Nicoliella spurrieriana: MOO44_03050
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Entry
MOO44_03050 CDS
T08428
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
lbe
Nicoliella spurrieriana
Pathway
lbe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lbe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MOO44_03050 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbe03019
]
MOO44_03050 (rny)
Messenger RNA biogenesis [BR:
lbe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MOO44_03050 (rny)
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Gene cluster
GFIT
Motif
Pfam:
HD
RNase_Y_N
HDOD
RII_binding_1
NCKAP5
Motif
Other DBs
NCBI-ProteinID:
UQS87155
UniProt:
A0A976RSN2
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Position
complement(307593..309185)
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AA seq
530 aa
AA seq
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MYPLVALVMMIAGVGCGVITSNKQTAKKLANAKRRARQYLDERLAEIKSKKQQVISQNQA
RTADYERTITEDLATQITDNQTRETRIRQHADYLKQLSSRIDDDERRYNEIKDLNAKNRA
FVKQTIIQADQLVVHRHQILNEQSQLDDNTVKQMVLDETAQQLRRERDIEVKYLGESTET
YANRIADNVIIEAIQRGPEDVPRSHIERNVNIPSAEIRNRLLSHDEQHLRLIETLTGTGL
IFDPDDFLTLHIVTHDPIRREVVRRALNALIVSRQINNANIETQVNNARQDVNDELRETG
EDVVLSLHLGAMHPDLMKIIGRLKFRTSYGQNVLYHSIEVAQLAGVIASELGLNPRLARR
AGMLHDIGKAIDHEVEGTHVELGVKIAETYHEEPIVVNAIAAHHGDVEPISLIATLISTS
DAISGARPGARSESVEEYVSRLKNLEKIADTQPGVKESYAIQAGREIRIIVDPKRLNDHD
MSDMTKHVQAQIENDLTYPGKIKVTAIRKLNVIQYVGYNQKRRRYANATK
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
ttgtatccattagtcgcattagtaatgatgattgccggagtgggctgtggagtcattact
agcaacaaacaaactgctaaaaaactggcgaatgcaaagcgtagggcaaggcaatatctt
gacgagcgtttggctgaaatcaaaagtaaaaagcagcaggtaattagccagaatcaagct
cggactgccgattatgaacggacaattaccgaggatttggcgacccagattaccgataat
caaacccgcgaaacgcggattcgtcaacatgccgattacttaaaacaattaagtagtcgt
atcgatgacgatgaacgccgttataatgaaattaaggatttgaatgccaaaaatcgggcg
tttgttaagcaaaccattattcaagctgatcaattggttgtgcaccgccatcagattcta
aatgagcaaagtcaattagacgataataccgttaagcaaatggtcttggacgaaacggca
cagcaacttcgaagggaacgtgacattgaggttaaataccttggtgagtccactgagacg
tatgccaatcgaattgctgataacgtcattattgaagccattcagcgcggacctgaagat
gttcctagaagccacattgaacgtaacgtcaacatcccatcagctgaaattcgcaatcgg
ctattaagtcacgatgagcagcacctgcggttaattgaaacgttgaccggaacgggcctg
atttttgacccggatgactttttaacgttacacattgtgacccacgatccaatccgacgg
gaagtggttcggagggcgttgaacgccttgattgtctcacgccaaattaataacgctaac
attgaaacccaggtcaataacgctaggcaagatgttaacgatgaactgcgtgaaactggt
gaagacgtggtgctttcactgcacttaggggcaatgcatcctgatttaatgaagatcatt
ggtcgtttgaagttccggactagttacgggcagaatgtcctttaccattcaattgaagtg
gcccaactcgccggagtgattgctagtgaactggggttaaacccccggctagcaagacgg
gccgggatgcttcatgatattggtaaggcgattgaccacgaagttgaggggacccacgtt
gaactaggggttaaaattgctgaaacctaccatgaggagccaatcgttgtcaacgcaatt
gctgcccatcatggtgatgtggaaccgattagcttgattgctacgctgatttcgacttct
gatgctatttctggtgcccgaccaggagccagaagtgaatcggttgaggaatacgtaagt
cgccttaagaatcttgaaaaaattgctgatacccagccgggtgtaaaagagagttacgca
attcaggctggccgtgagattcggattattgttgatcctaagcggttaaacgatcatgat
atgtcggatatgactaagcacgttcaagcacaaattgaaaacgacttaacttacccggga
aaaatcaaagtgactgcaattcgcaaattaaatgtaattcaatacgttggctataatcaa
aagcggcgacgctatgccaatgccactaaataa
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